BLASTX nr result
ID: Angelica23_contig00013987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00013987
(540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi... 221 4e-58
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera] 221 4e-58
ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi... 217 1e-57
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi... 216 5e-57
ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containi... 199 7e-53
>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 221 bits (563), Expect(2) = 4e-58
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +3
Query: 57 EKKGLSMLPACTWIEIKKQSYVFHSGDKSHAQTKEIYENLDKLMLKISKHGYAPEKNTLL 236
+++GL MLPAC+WIEIKKQ Y F SGDK HAQ+KEIY+ LD+LML+ISKHGY P+ LL
Sbjct: 563 KRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLL 622
Query: 237 PDVDKQEGRLQSYHSEKLAISFGLLNTQESTPLHLVQSHRMCNDCHNAVKLIAMVTNCEI 416
PDVD+QE R+ YHSEKLAI+FGL+NT + TPL +VQSHR+C DCH+A+KLIA+VT EI
Sbjct: 623 PDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREI 682
Query: 417 VVRDASRFHRFQDGKCSCGDYW 482
VVRDASRFH F+DG CSCGDYW
Sbjct: 683 VVRDASRFHHFKDGSCSCGDYW 704
Score = 28.9 bits (63), Expect(2) = 4e-58
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 2 VYNSLGKSEEAASVFNTLRKKG 67
+YN G+ EEAA+V TL+++G
Sbjct: 545 IYNRSGRLEEAAAVIQTLKRRG 566
>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 221 bits (563), Expect(2) = 4e-58
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +3
Query: 57 EKKGLSMLPACTWIEIKKQSYVFHSGDKSHAQTKEIYENLDKLMLKISKHGYAPEKNTLL 236
+++GL MLPAC+WIEIKKQ Y F SGDK HAQ+KEIY+ LD+LML+ISKHGY P+ LL
Sbjct: 563 KRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLL 622
Query: 237 PDVDKQEGRLQSYHSEKLAISFGLLNTQESTPLHLVQSHRMCNDCHNAVKLIAMVTNCEI 416
PDVD+QE R+ YHSEKLAI+FGL+NT + TPL +VQSHR+C DCH+A+KLIA+VT EI
Sbjct: 623 PDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREI 682
Query: 417 VVRDASRFHRFQDGKCSCGDYW 482
VVRDASRFH F+DG CSCGDYW
Sbjct: 683 VVRDASRFHHFKDGSCSCGDYW 704
Score = 28.9 bits (63), Expect(2) = 4e-58
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 2 VYNSLGKSEEAASVFNTLRKKG 67
+YN G+ EEAA+V TL+++G
Sbjct: 545 IYNXSGRLEEAAAVIQTLKRRG 566
>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 217 bits (553), Expect(2) = 1e-57
Identities = 97/142 (68%), Positives = 117/142 (82%)
Frame = +3
Query: 57 EKKGLSMLPACTWIEIKKQSYVFHSGDKSHAQTKEIYENLDKLMLKISKHGYAPEKNTLL 236
+KKGL MLPAC+W+E+KKQ Y F GDKSH+QTKEIY+ +D LM++I KHGYA E TLL
Sbjct: 550 KKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLL 609
Query: 237 PDVDKQEGRLQSYHSEKLAISFGLLNTQESTPLHLVQSHRMCNDCHNAVKLIAMVTNCEI 416
PDVD++E R+ YHSEKLAI+FGL+NT TPL + Q HR+C DCH+A+KLIAMVT EI
Sbjct: 610 PDVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREI 669
Query: 417 VVRDASRFHRFQDGKCSCGDYW 482
VVRDASRFH F++G CSCGDYW
Sbjct: 670 VVRDASRFHHFRNGSCSCGDYW 691
Score = 31.2 bits (69), Expect(2) = 1e-57
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 2 VYNSLGKSEEAASVFNTLRKKG 67
+YNS GK +EAA + TL+KKG
Sbjct: 532 LYNSSGKLKEAAGILQTLKKKG 553
>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 216 bits (550), Expect(2) = 5e-57
Identities = 96/142 (67%), Positives = 116/142 (81%)
Frame = +3
Query: 57 EKKGLSMLPACTWIEIKKQSYVFHSGDKSHAQTKEIYENLDKLMLKISKHGYAPEKNTLL 236
++KGL MLPACTWIE+KKQSY F GDKSH+QTKEIYE ++ +M++IS+HGY E LL
Sbjct: 549 KRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALL 608
Query: 237 PDVDKQEGRLQSYHSEKLAISFGLLNTQESTPLHLVQSHRMCNDCHNAVKLIAMVTNCEI 416
PDVD++E R+ YHSEKLAI+FGL+NT TPL + Q HR+C DCH+A+K IAMVT EI
Sbjct: 609 PDVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREI 668
Query: 417 VVRDASRFHRFQDGKCSCGDYW 482
VVRDASRFH F+DG CSCGDYW
Sbjct: 669 VVRDASRFHHFRDGSCSCGDYW 690
Score = 30.4 bits (67), Expect(2) = 5e-57
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 2 VYNSLGKSEEAASVFNTLRKKG 67
+YNS GK +EAA V TL++KG
Sbjct: 531 LYNSSGKLKEAAGVLQTLKRKG 552
>ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 199 bits (506), Expect(2) = 7e-53
Identities = 89/143 (62%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Frame = +3
Query: 57 EKKGLSMLPACTWIEIKKQSYVFHSGDKSHAQTKEIYENLDKLMLKISKHGYAPEK-NTL 233
++KGL MLPAC+WIE+ Q + F SGDK H Q +++ +D+LML ISK GY PE+ N +
Sbjct: 564 KRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFM 623
Query: 234 LPDVDKQEGRLQSYHSEKLAISFGLLNTQESTPLHLVQSHRMCNDCHNAVKLIAMVTNCE 413
LPDVD+ E +++ YHSEKLAI++GLLNT E TPL +VQSHR+C+DCH+ +KLIAM+T E
Sbjct: 624 LPDVDENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKRE 683
Query: 414 IVVRDASRFHRFQDGKCSCGDYW 482
IV+RDASRFH F+DG CSCGDYW
Sbjct: 684 IVIRDASRFHHFRDGSCSCGDYW 706
Score = 33.5 bits (75), Expect(2) = 7e-53
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 2 VYNSLGKSEEAASVFNTLRKKG 67
+YNS GK +EAA VF TL++KG
Sbjct: 546 IYNSSGKLKEAADVFQTLKRKG 567