BLASTX nr result
ID: Angelica23_contig00013908
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00013908
(619 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|2... 218 1e-60
ref|XP_002318932.1| predicted protein [Populus trichocarpa] gi|2... 213 3e-59
ref|XP_004135975.1| PREDICTED: polygalacturonase At1g48100-like ... 204 8e-58
ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabi... 208 1e-57
ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana... 207 2e-57
>ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|222871433|gb|EEF08564.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 218 bits (555), Expect(2) = 1e-60
Identities = 102/126 (80%), Positives = 116/126 (92%)
Frame = +3
Query: 3 SIGSLGIRNSRACVSNIAVTDSVIKYSTNGVRIKTWQGGSGSVSKVTFKNINMDTVRNPI 182
SIGSLGIRNSRACVSNI VTDSVIK S NGVRIKTWQGG GSVSK+TF NI+M+TVRNPI
Sbjct: 251 SIGSLGIRNSRACVSNITVTDSVIKNSDNGVRIKTWQGGYGSVSKITFHNIHMETVRNPI 310
Query: 183 IIDQYYCETKGCANQTSAVYVSDIEYTSIKGTYDVRSPPMHLACSNNIPCTNLTLSDIKL 362
IIDQYYC+T+ C NQTSAVY+SDI YT+IKGTYD+RSPP+HLACS+++PCTNL LS+I+L
Sbjct: 311 IIDQYYCQTRNCTNQTSAVYISDILYTNIKGTYDIRSPPLHLACSDSVPCTNLRLSEIEL 370
Query: 363 FPAQGQ 380
PAQGQ
Sbjct: 371 LPAQGQ 376
Score = 41.2 bits (95), Expect(2) = 1e-60
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 385 MLEPFCWNAYGGLQTLIVPPIYC 453
M PFCWNAYG +Q L +PP+ C
Sbjct: 378 MANPFCWNAYGPMQNLTIPPVSC 400
>ref|XP_002318932.1| predicted protein [Populus trichocarpa] gi|222857308|gb|EEE94855.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 213 bits (541), Expect(2) = 3e-59
Identities = 100/126 (79%), Positives = 114/126 (90%)
Frame = +3
Query: 3 SIGSLGIRNSRACVSNIAVTDSVIKYSTNGVRIKTWQGGSGSVSKVTFKNINMDTVRNPI 182
SIGSLGI NSRACVSNI V DSVIK+S NGVRIKTWQGG GSVSK++F NINM+TVRNPI
Sbjct: 306 SIGSLGIGNSRACVSNITVRDSVIKHSDNGVRIKTWQGGYGSVSKISFHNINMETVRNPI 365
Query: 183 IIDQYYCETKGCANQTSAVYVSDIEYTSIKGTYDVRSPPMHLACSNNIPCTNLTLSDIKL 362
IIDQYYC+TK C NQTSAV++SDI YTSIKGTYDVRSPP+HLACS+++PCTNL L++I+L
Sbjct: 366 IIDQYYCQTKNCTNQTSAVHISDILYTSIKGTYDVRSPPLHLACSDSVPCTNLELAEIEL 425
Query: 363 FPAQGQ 380
PA GQ
Sbjct: 426 LPAHGQ 431
Score = 41.6 bits (96), Expect(2) = 3e-59
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 391 EPFCWNAYGGLQTLIVPPIYC 453
+PFCWNAYG +Q L +PPI C
Sbjct: 435 DPFCWNAYGAMQNLTIPPISC 455
>ref|XP_004135975.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449488764|ref|XP_004158164.1| PREDICTED:
polygalacturonase At1g48100-like [Cucumis sativus]
Length = 467
Score = 204 bits (519), Expect(2) = 8e-58
Identities = 96/125 (76%), Positives = 110/125 (88%)
Frame = +3
Query: 3 SIGSLGIRNSRACVSNIAVTDSVIKYSTNGVRIKTWQGGSGSVSKVTFKNINMDTVRNPI 182
SIGSLG+RNSRACV+NI V DSVIK S NGVRIKTWQGG G+V +TF NI+MD VRNPI
Sbjct: 300 SIGSLGVRNSRACVTNITVRDSVIKDSDNGVRIKTWQGGYGAVRGITFSNIHMDNVRNPI 359
Query: 183 IIDQYYCETKGCANQTSAVYVSDIEYTSIKGTYDVRSPPMHLACSNNIPCTNLTLSDIKL 362
IIDQ+YC TK C NQTSAV VSDI+YT+IKGTYD+RSPPMH ACS+++PCTNLTLS+I+L
Sbjct: 360 IIDQFYCLTKDCTNQTSAVSVSDIQYTNIKGTYDIRSPPMHFACSDSVPCTNLTLSEIEL 419
Query: 363 FPAQG 377
PAQG
Sbjct: 420 LPAQG 424
Score = 45.4 bits (106), Expect(2) = 8e-58
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 385 MLEPFCWNAYGGLQTLIVPPIYC 453
+L+PFCWNAYG LQTL +PP+ C
Sbjct: 427 VLDPFCWNAYGDLQTLTIPPVSC 449
>ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata] gi|297337951|gb|EFH68368.1| glycoside hydrolase
family 28 protein [Arabidopsis lyrata subsp. lyrata]
Length = 491
Score = 208 bits (529), Expect(2) = 1e-57
Identities = 100/126 (79%), Positives = 110/126 (87%)
Frame = +3
Query: 3 SIGSLGIRNSRACVSNIAVTDSVIKYSTNGVRIKTWQGGSGSVSKVTFKNINMDTVRNPI 182
SIGSLG NSRACVSNI V DSVIKYS NGVRIKTWQGGSGSVS VTF NI++D+VRNPI
Sbjct: 322 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPI 381
Query: 183 IIDQYYCETKGCANQTSAVYVSDIEYTSIKGTYDVRSPPMHLACSNNIPCTNLTLSDIKL 362
IIDQYYC TK CAN+TSAV+VSDI Y IKGTYD+RSPPMH CS+ IPCTNLTLSDI+L
Sbjct: 382 IIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPPMHFGCSDAIPCTNLTLSDIEL 441
Query: 363 FPAQGQ 380
PA+G+
Sbjct: 442 LPAKGE 447
Score = 40.8 bits (94), Expect(2) = 1e-57
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 373 KDKKMLEPFCWNAYGGLQTLIVPPIYC 453
K + +L+PFCWNAYG + L +PP++C
Sbjct: 445 KGEFVLDPFCWNAYGIAEELSIPPVWC 471
>ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|9972390|gb|AAG10640.1|AC022521_18 Putative
polygalacturonase [Arabidopsis thaliana]
gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis
thaliana] gi|332189311|gb|AEE27432.1| Pectin lyase-like
protein [Arabidopsis thaliana]
Length = 491
Score = 207 bits (528), Expect(2) = 2e-57
Identities = 99/126 (78%), Positives = 110/126 (87%)
Frame = +3
Query: 3 SIGSLGIRNSRACVSNIAVTDSVIKYSTNGVRIKTWQGGSGSVSKVTFKNINMDTVRNPI 182
SIGSLG NSRACVSNI V DSVIKYS NGVRIKTWQGGSGSVS VTF NI++D+VRNPI
Sbjct: 322 SIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPI 381
Query: 183 IIDQYYCETKGCANQTSAVYVSDIEYTSIKGTYDVRSPPMHLACSNNIPCTNLTLSDIKL 362
IIDQYYC TK CAN+TSAV+VSDI Y IKGTYD+RSPPMH CS+ +PCTNLTLSDI+L
Sbjct: 382 IIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPPMHFGCSDAVPCTNLTLSDIEL 441
Query: 363 FPAQGQ 380
PA+G+
Sbjct: 442 LPAKGE 447
Score = 40.8 bits (94), Expect(2) = 2e-57
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 373 KDKKMLEPFCWNAYGGLQTLIVPPIYC 453
K + +L+PFCWNAYG + L +PP++C
Sbjct: 445 KGEIVLDPFCWNAYGIAEELSIPPVWC 471