BLASTX nr result

ID: Angelica23_contig00013811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013811
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   119   3e-25
tpg|DAA37858.1| TPA: histone H3.2 [Zea mays]                          116   2e-24
ref|XP_001865500.1| histone H3.3 type 2 [Culex quinquefasciatus]...   115   5e-24
ref|XP_003788934.1| PREDICTED: uncharacterized protein LOC100957...   114   8e-24
ref|XP_002714192.1| PREDICTED: histone cluster 1, H3f-like [Oryc...   114   8e-24

>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/85 (72%), Positives = 67/85 (78%)
 Frame = +1

Query: 4   LSKDHSLNPNHFSKSIHTHLLYLSTTSNLSMARTKQTARKSTGGKAPRKQLATKAARKSA 183
           L    +L  +  S+   T + +LS  S   MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 70  LHSHRNLKSHSLSQLNKTPIFFLSNFSLFPMARTKQTARKSTGGKAPRKQLATKAARKSA 129

Query: 184 PATGGVKKPHRFRPGTVALREIRKY 258
           PATGGVKKPHRFRPGTVALREIRKY
Sbjct: 130 PATGGVKKPHRFRPGTVALREIRKY 154


>tpg|DAA37858.1| TPA: histone H3.2 [Zea mays]
          Length = 169

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/73 (83%), Positives = 64/73 (87%)
 Frame = +1

Query: 40  SKSIHTHLLYLSTTSNLSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF 219
           S+S+   LLY    + L MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF
Sbjct: 20  SRSVDCSLLY----APLRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF 75

Query: 220 RPGTVALREIRKY 258
           RPGTVALREIRKY
Sbjct: 76  RPGTVALREIRKY 88


>ref|XP_001865500.1| histone H3.3 type 2 [Culex quinquefasciatus]
           gi|167878389|gb|EDS41772.1| histone H3.3 type 2 [Culex
           quinquefasciatus]
          Length = 158

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/71 (80%), Positives = 64/71 (90%)
 Frame = +1

Query: 46  SIHTHLLYLSTTSNLSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRP 225
           SI+  ++  S+T+   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RP
Sbjct: 7   SINPEVIEASSTTAKKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRP 66

Query: 226 GTVALREIRKY 258
           GTVALREIR+Y
Sbjct: 67  GTVALREIRRY 77


>ref|XP_003788934.1| PREDICTED: uncharacterized protein LOC100957116 [Otolemur
           garnettii]
          Length = 547

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = +1

Query: 61  LLYLSTTSNLSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 240
           LL L  + ++ MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVAL
Sbjct: 401 LLQLGPSQSVQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVAL 460

Query: 241 REIRKY 258
           REIR+Y
Sbjct: 461 REIRRY 466



 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/55 (96%), Positives = 55/55 (100%)
 Frame = +1

Query: 94  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 258
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+Y
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRY 55


>ref|XP_002714192.1| PREDICTED: histone cluster 1, H3f-like [Oryctolagus cuniculus]
          Length = 170

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/73 (79%), Positives = 65/73 (89%)
 Frame = +1

Query: 40  SKSIHTHLLYLSTTSNLSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF 219
           S+  H+H L    ++ L+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+
Sbjct: 21  SRGRHSHFL----SAVLAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRY 76

Query: 220 RPGTVALREIRKY 258
           RPGTVALREIR+Y
Sbjct: 77  RPGTVALREIRRY 89


Top