BLASTX nr result

ID: Angelica23_contig00013793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013793
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like i...   218   3e-54
emb|CAD12248.1| DCL protein [Coffea arabica]                          218   4e-54
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   217   6e-54
ref|XP_002510210.1| DCL protein, chloroplast precursor, putative...   213   9e-53
ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52

>ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 215

 Score =  218 bits (555), Expect = 3e-54
 Identities = 120/211 (56%), Positives = 143/211 (67%), Gaps = 18/211 (8%)
 Frame = +1

Query: 139 MAYCCVSLQRVDVHKNPIFINLS----TYSSPRILSL-PCFGALKATS-----SNQDAYG 288
           MAY   SL  V +H+NPI ++LS    ++ S +  SL P   A K  S      +QDA  
Sbjct: 3   MAYVASSLLPVRLHRNPISLHLSPSLRSFPSRQTTSLRPVLCARKPRSPGGKLGSQDARA 62

Query: 289 SDLLRKPVSKEPG--------RXXXXXXXXXXXXXXXXXXILEETVPLVGFVRMLLHSGK 444
           SD LRKP    PG        R                  ILE+TVPLVG+VRM++HSGK
Sbjct: 63  SDFLRKPTIS-PGDDGGGSSVREKSYKGREEEEWVDWEDQILEDTVPLVGYVRMIIHSGK 121

Query: 445 YESGDQLSPEHEKTILERLLAYHPECEEKIGSGVDYITIGYHPNFERSRCLFIVRKDGEL 624
           YE+GD+LS EHEK +LE+LLAYHPECE+KIG G+DYIT+GYHP+FE SRCLFIVR DGEL
Sbjct: 122 YENGDRLSLEHEKFVLEKLLAYHPECEKKIGCGIDYITVGYHPDFEGSRCLFIVRNDGEL 181

Query: 625 VDFSYWKCLEGLIRKKYPLYADSFIPRHFRR 717
           VDFSYWKC++GLIRKKYP YADSFI RHF+R
Sbjct: 182 VDFSYWKCIKGLIRKKYPQYADSFILRHFQR 212


>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score =  218 bits (554), Expect = 4e-54
 Identities = 108/178 (60%), Positives = 131/178 (73%), Gaps = 15/178 (8%)
 Frame = +1

Query: 244 FGALKATSSN---QDAYGSDLLRKPVSK------------EPGRXXXXXXXXXXXXXXXX 378
           + A++ TSS     D++G++LLRKPV              E                   
Sbjct: 47  YAAVRTTSSEGRGSDSFGAELLRKPVVSPAVVSEGEDSVVEEDDKYRSGGEEVEAWVDWE 106

Query: 379 XXILEETVPLVGFVRMLLHSGKYESGDQLSPEHEKTILERLLAYHPECEEKIGSGVDYIT 558
             IL++TVPLV FVRM+LHSGKYESGD+LSPEHE+TILER+L YHP+CE+KIGSGVDYIT
Sbjct: 107 DQILQDTVPLVNFVRMILHSGKYESGDRLSPEHERTILERVLPYHPQCEKKIGSGVDYIT 166

Query: 559 IGYHPNFERSRCLFIVRKDGELVDFSYWKCLEGLIRKKYPLYADSFIPRHFRRGRRTD 732
           IGYHP+F+RSRCLFIVRKDGELVDFSYWKC++GLIRK YPLYAD+FI RHF++ RR+D
Sbjct: 167 IGYHPDFDRSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADTFIIRHFKKPRRSD 224


>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  217 bits (552), Expect = 6e-54
 Identities = 117/198 (59%), Positives = 138/198 (69%), Gaps = 7/198 (3%)
 Frame = +1

Query: 160 LQRVDVHKNPIFINLST----YSSPRILSLPCFGALK-ATSSNQDAYGSDLLRKPVSKEP 324
           LQ   +H NPI ++ S     +++ R  S+P   ALK A+  +Q+ YG DLLRKP    P
Sbjct: 11  LQIHHLHTNPISLHPSHPILHFATHRTPSVP---ALKTASDGSQEVYGPDLLRKPHVSAP 67

Query: 325 GRXXXXXXXXXXXXXXXXXX--ILEETVPLVGFVRMLLHSGKYESGDQLSPEHEKTILER 498
                                 ILE+TVPLVGFVRM+LHSGKY SG++LSPEHEK ILER
Sbjct: 68  DDEGDRKRTKRKGGEWVDWEDQILEDTVPLVGFVRMILHSGKYRSGERLSPEHEKIILER 127

Query: 499 LLAYHPECEEKIGSGVDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCLEGLIRKKYP 678
           LL YHP  E KIGSG+DYIT+GYHP FE SRCLFIVRKDGELVDFSYWKC++G IRK YP
Sbjct: 128 LLPYHPGYERKIGSGIDYITVGYHPEFESSRCLFIVRKDGELVDFSYWKCIKGFIRKNYP 187

Query: 679 LYADSFIPRHFRRGRRTD 732
           LYADSFI RHFR+ RR++
Sbjct: 188 LYADSFILRHFRQHRRSE 205


>ref|XP_002510210.1| DCL protein, chloroplast precursor, putative [Ricinus communis]
           gi|223550911|gb|EEF52397.1| DCL protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 214

 Score =  213 bits (542), Expect = 9e-53
 Identities = 113/202 (55%), Positives = 135/202 (66%), Gaps = 18/202 (8%)
 Frame = +1

Query: 178 HKNPIFINLSTYSSPRILSLPCFGALKATSSNQDAY-----GSDLLRKPV---------- 312
           + NPI    S Y SP ILS P      + +S   A      GSDLLRKP+          
Sbjct: 17  YSNPI----SLYFSPVILSFPFHRTTTSFNSRIFALKTGSDGSDLLRKPIVPSEKELSGI 72

Query: 313 ---SKEPGRXXXXXXXXXXXXXXXXXXILEETVPLVGFVRMLLHSGKYESGDQLSPEHEK 483
               ++  R                  ILE+TVPLVGFVRM+LHSGKYE+GD+LSPEHE+
Sbjct: 73  SDDEEDSNRKRDNKDKEDDELVDWEDQILEDTVPLVGFVRMILHSGKYENGDRLSPEHER 132

Query: 484 TILERLLAYHPECEEKIGSGVDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCLEGLI 663
           TI+ERLL +HPECE+KIG G+DYIT+G+H  FE SRCLFIVRKDG+LVDFSYWKC++GLI
Sbjct: 133 TIVERLLPFHPECEKKIGPGIDYITVGHHTEFENSRCLFIVRKDGKLVDFSYWKCIKGLI 192

Query: 664 RKKYPLYADSFIPRHFRRGRRT 729
           RK YPLYADSFI RHFRR R++
Sbjct: 193 RKNYPLYADSFILRHFRRRRQS 214


>ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|222835256|gb|EEE73691.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  211 bits (537), Expect = 3e-52
 Identities = 107/188 (56%), Positives = 132/188 (70%), Gaps = 12/188 (6%)
 Frame = +1

Query: 202 LSTYSSPRI-LSLP----CFGALKATSSNQDAYGSDLLRKPVSKEPG-------RXXXXX 345
           +S +SSP + LS P     F + +  +    + GSDLLRKP+                  
Sbjct: 22  ISLFSSPAVVLSFPFNRTAFASPRLFAIKTGSDGSDLLRKPIVPSEKDLVGISEEVEDSE 81

Query: 346 XXXXXXXXXXXXXILEETVPLVGFVRMLLHSGKYESGDQLSPEHEKTILERLLAYHPECE 525
                        ILE+TVPLVGFVRM+LHSGKYESGD+LSP+HE+TI++RLLAYHP+C+
Sbjct: 82  EEKEEGFVDWEDRILEDTVPLVGFVRMILHSGKYESGDRLSPDHERTIVDRLLAYHPDCD 141

Query: 526 EKIGSGVDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCLEGLIRKKYPLYADSFIPR 705
            KIG G+DYIT+GYHP+F  SRCLFIVRKDG+LVDFSYWKC++GLI+K YPLYADSFI R
Sbjct: 142 SKIGCGIDYITVGYHPDFVESRCLFIVRKDGQLVDFSYWKCIKGLIKKNYPLYADSFILR 201

Query: 706 HFRRGRRT 729
           HFRR RR+
Sbjct: 202 HFRRRRRS 209


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