BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013790
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-61
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   236   1e-60
ref|NP_194257.1| pentatricopeptide repeat-containing protein [Ar...   236   2e-60
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   234   7e-60

>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  239 bits (611), Expect = 1e-61
 Identities = 112/168 (66%), Positives = 135/168 (80%)
 Frame = -3

Query: 505 LRRNVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL 326
           LRRN GIS KL+R+Y+  G V+ AHQVFD+M +R   AFPWNSLI+GY E G ++ A+AL
Sbjct: 40  LRRNAGISSKLVRLYSSCGDVEVAHQVFDEMFKRGESAFPWNSLIAGYTESGLYEDAMAL 99

Query: 325 YFQMVEDGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAK 146
           YFQM E+GVEPD FTFPRVLKACGGIG+I +GE VHR ++R G  NDG++LN LVDMYAK
Sbjct: 100 YFQMEEEGVEPDQFTFPRVLKACGGIGLIRIGEAVHRDLVRLGFANDGFVLNALVDMYAK 159

Query: 145 CGDIVKARKVFDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLKE 2
           CGDIVKAR++FD I CKD +SWN MLTGYIRH L+ EALH F  M+ +
Sbjct: 160 CGDIVKARRIFDKIDCKDSISWNSMLTGYIRHGLIAEALHTFHSMVHD 207



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/158 (32%), Positives = 86/158 (54%)
 Frame = -3

Query: 475 LIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVEDGVE 296
           L+ MYA  G + +A ++FDK+  +D  +  WNS+++GY   G    AL  +  MV DG+E
Sbjct: 153 LVDMYAKCGDIVKARRIFDKIDCKD--SISWNSMLTGYIRHGLIAEALHTFHSMVHDGME 210

Query: 295 PDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAKCGDIVKARKV 116
            D      +L     +    V  ++H  I+RRG+  D  I N L+ +Y+    + +AR +
Sbjct: 211 LDSVAVSTIL---ANVSSFEVAVQIHGWIVRRGMEWDFSIANSLIAVYSNGRKLDRARWL 267

Query: 115 FDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLKE 2
           FD +  KD+VSWN +++ + +     +AL  F LM ++
Sbjct: 268 FDHMPKKDIVSWNSIISAHCKD---LKALTYFELMERD 302



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = -3

Query: 487 ISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVE 308
           I+  LI +Y+    +D A  +FD M ++D+ +  WNS+IS + +    D     YF+++E
Sbjct: 247 IANSLIAVYSNGRKLDRARWLFDHMPKKDIVS--WNSIISAHCK----DLKALTYFELME 300

Query: 307 -DGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYA 149
            DG  PD  TF  +L AC  +G++  GE +        L    Y +N +++ YA
Sbjct: 301 RDGALPDKITFVSLLSACAHLGLVKDGERLF------SLMKAKYQINPIMEHYA 348


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  239 bits (610), Expect = 2e-61
 Identities = 114/167 (68%), Positives = 139/167 (83%)
 Frame = -3

Query: 505 LRRNVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL 326
           LR++V +S KL+R+YA  G ++EAH++FD+M +R+  AF WNSLISGYAELG ++ A+AL
Sbjct: 110 LRKSVALSSKLLRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMAL 169

Query: 325 YFQMVEDGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAK 146
           YFQM E+GV PD FTFPRVLKACGGIG I VGEEVHRH++R G  +DG++LN LVDMYAK
Sbjct: 170 YFQMEEEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAK 229

Query: 145 CGDIVKARKVFDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLK 5
           CGDIVKARKVFD IVC+D VSWN MLTGYIRH L  +AL +FR ML+
Sbjct: 230 CGDIVKARKVFDKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQ 276



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/139 (31%), Positives = 82/139 (58%)
 Frame = -3

Query: 475 LIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVEDGVE 296
           L+ MYA  G + +A +VFDK+  RD  +  WNS+++GY   G    AL+++ +M++ G E
Sbjct: 223 LVDMYAKCGDIVKARKVFDKIVCRD--SVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFE 280

Query: 295 PDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAKCGDIVKARKV 116
           PD      V+    G+  + +  ++H  ++RRG+  +  I N L+ +Y+  G + +A  +
Sbjct: 281 PDAVAISTVVT---GVPSLKLAGQIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWL 337

Query: 115 FDGIVCKDLVSWNIMLTGY 59
           FD +  +D+VSWN +++ +
Sbjct: 338 FDHMPERDVVSWNSIISAH 356


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
           ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  236 bits (603), Expect = 1e-60
 Identities = 111/167 (66%), Positives = 134/167 (80%)
 Frame = -3

Query: 505 LRRNVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL 326
           LR NVGIS KL+R+YA  G  + AH+VFD+M +R+   F WNSLISGYAELGQ++ A+AL
Sbjct: 354 LRNNVGISSKLVRLYASCGYAEVAHEVFDRMSKRESSPFAWNSLISGYAELGQYEDAMAL 413

Query: 325 YFQMVEDGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAK 146
           YFQM EDGV+PD FTFPRVLKACGGIG + +GE +HR +++ G G D ++LN LVDMYAK
Sbjct: 414 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAK 473

Query: 145 CGDIVKARKVFDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLK 5
           CGDIVKAR VFD I  KD VSWN MLTGY+ H LLHEAL +FRLM++
Sbjct: 474 CGDIVKARNVFDMIPNKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ 520



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/141 (32%), Positives = 81/141 (57%)
 Frame = -3

Query: 475 LIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVEDGVE 296
           L+ MYA  G + +A  VFD +  +D  +  WNS+++GY   G    AL ++  MV++G++
Sbjct: 467 LVDMYAKCGDIVKARNVFDMIPNKDYVS--WNSMLTGYLHHGLLHEALDIFRLMVQNGID 524

Query: 295 PDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAKCGDIVKARKV 116
           PD      VL     +   H G ++H  +IRRG+  +  + N L+ +Y+K G + +A  +
Sbjct: 525 PDKVAISSVLARV--LSFKH-GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFI 581

Query: 115 FDGIVCKDLVSWNIMLTGYIR 53
           FD ++ +D VSWN +++ + R
Sbjct: 582 FDQMLERDTVSWNAIISAHSR 602


>ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 527

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/167 (66%), Positives = 133/167 (79%)
 Frame = -3

Query: 505 LRRNVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL 326
           LR N+GIS KL+R+YA  G  + AH+VFD+M +RD   F WNSLISGYAELGQ++ A+AL
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182

Query: 325 YFQMVEDGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAK 146
           YFQM EDGV+PD FTFPRVLKACGGIG + +GE +HR +++ G G D Y+LN LV MYAK
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242

Query: 145 CGDIVKARKVFDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLK 5
           CGDIVKAR VFD I  KD VSWN MLTGY+ H LLHEAL +FRLM++
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ 289



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/142 (32%), Positives = 82/142 (57%)
 Frame = -3

Query: 475 LIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVEDGVE 296
           L+ MYA  G + +A  VFD +  +D  +  WNS+++GY   G    AL ++  MV++G+E
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVS--WNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293

Query: 295 PDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAKCGDIVKARKV 116
           PD      VL     +   H G ++H  +IRRG+  +  + N L+ +Y+K G + +A  +
Sbjct: 294 PDKVAISSVLARV--LSFKH-GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFI 350

Query: 115 FDGIVCKDLVSWNIMLTGYIRH 50
           FD ++ +D VSWN +++ + ++
Sbjct: 351 FDQMLERDTVSWNAIISAHSKN 372


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/168 (67%), Positives = 134/168 (79%)
 Frame = -3

Query: 505 LRRNVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL 326
           LRRNVGIS KL+R+YA  G +++AHQVFD+M  R+  AF WNSLISGYAELG ++ ALAL
Sbjct: 85  LRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALAL 144

Query: 325 YFQMVEDGVEPDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAK 146
           YFQM E+GVEPD FTFPRVLKACGGIG I +GE VHRH++R G   D ++LN LVDMY+K
Sbjct: 145 YFQMEEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSK 204

Query: 145 CGDIVKARKVFDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLMLKE 2
           CG IV+ARKVFD I  KD+VSWN MLTGY RH L  EAL +F  M++E
Sbjct: 205 CGCIVRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQE 252



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/155 (32%), Positives = 86/155 (55%)
 Frame = -3

Query: 475 LIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALALYFQMVEDGVE 296
           L+ MY+  G +  A +VFD++  +D+ +  WNS+++GY   G    AL ++ QM+++G E
Sbjct: 198 LVDMYSKCGCIVRARKVFDQIEYKDIVS--WNSMLTGYTRHGLHFEALDIFDQMIQEGYE 255

Query: 295 PDGFTFPRVLKACGGIGMIHVGEEVHRHIIRRGLGNDGYILNGLVDMYAKCGDIVKARKV 116
           PD      +L     I  +     +H  +IR G+  +  I N L+ MYAKCG + +A+ +
Sbjct: 256 PDSVALSTLLS---NISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWL 312

Query: 115 FDGIVCKDLVSWNIMLTGYIRHELLHEALHVFRLM 11
           F  +  KD+VSWN +++ +       EAL  F +M
Sbjct: 313 FQQMPQKDMVSWNSIISAHFNSA---EALTYFEVM 344



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
 Frame = -3

Query: 496 NVGISCKLIRMYAVSGLVDEAHQVFDKMCQRDVYAFPWNSLISGYAELGQFDAALAL-YF 320
           N+ I+  LI MYA  G ++ A  +F +M Q+D+ +  WNS+IS +     F++A AL YF
Sbjct: 289 NLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVS--WNSIISAH-----FNSAEALTYF 341

Query: 319 QMVED-GVEPDGFTFPRVLKACGGIGMIHVGEEVH-----RHIIRRGLGNDGYILNGLVD 158
           +++E  GV PDG TF  +L  C  +G++  G E++     ++ IR  + +   ++N    
Sbjct: 342 EVMESLGVSPDGVTFVSLLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVN---- 397

Query: 157 MYAKCGDIVKARKV 116
           +Y + G I +A K+
Sbjct: 398 LYGRAGMIEEAYKI 411