BLASTX nr result

ID: Angelica23_contig00013627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013627
         (1686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32146.3| unnamed protein product [Vitis vinifera]              577   e-162
ref|XP_002886632.1| radical SAM domain-containing protein [Arabi...   565   e-158
gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD prote...   563   e-158
ref|NP_564755.1| radical SAM domain-containing protein [Arabidop...   563   e-158
ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransf...   556   e-156

>emb|CBI32146.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  577 bits (1486), Expect = e-162
 Identities = 279/361 (77%), Positives = 310/361 (85%)
 Frame = +2

Query: 260  KAVLKGMTYTQFQRWVSSHGYRPGQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQ 439
            K +LKGM Y + Q WV SHGYRPGQALMLWK LYG+NIWA  I++LEGLNKDFK ML++ 
Sbjct: 78   KVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEH 137

Query: 440  AEFEVFKLKDILTASDGTRKILFTLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFC 619
            AEF+   LKD + ASDGTRKILFTLDDGLVIETV+IP D+GR TVCVSSQVGCAMNCQFC
Sbjct: 138  AEFKALTLKDSIKASDGTRKILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFC 197

Query: 620  YTGRMGLKRNLTAAEIVEQAVFARRLLMSEVGSIANVVFMGMGEPLQNVDNVIKAIDIMV 799
            YTGRMGL R+LTAAEIVEQAV+ARRL  SEVGSI NVVFMGMGEP  N+++VIKA DIMV
Sbjct: 198  YTGRMGLTRHLTAAEIVEQAVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMV 257

Query: 800  HDHGLHISPRKITVSTSGLVPQLKRFLRESNCALAVSLNATTDVARNWIMPINRKYNXXX 979
            HD GLH SPRK+TVSTSGLVPQLK FLRESNCALAVSLNATTD  RNW+MPINRKYN   
Sbjct: 258  HDQGLHFSPRKVTVSTSGLVPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSL 317

Query: 980  XXXXXXXXXXXXHKYKVLFEYVLLAGVNDSIEDAKRLIDLVQGIPCKINLITFNPHSGSQ 1159
                        H YKVLFEYV+LAGVNDS+EDA+RLIDLVQGIPCK+NLI+FNPH GSQ
Sbjct: 318  LLQTLREELRSKHNYKVLFEYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQ 377

Query: 1160 FKPTSDEKMIEFRNILAAGGCVVLLRPSRGNDQMAACGQLGNPGEIQAPLLRVPAQFQAA 1339
            FKPTS+EK+IEFRNILA  GC+V LRPSRG+DQMAACGQLG PG++QAPLLRVPA+FQ+A
Sbjct: 378  FKPTSEEKIIEFRNILAEAGCIVFLRPSRGDDQMAACGQLGKPGQVQAPLLRVPAKFQSA 437

Query: 1340 L 1342
            L
Sbjct: 438  L 438


>ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297332473|gb|EFH62891.1| radical SAM
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 458

 Score =  565 bits (1455), Expect = e-158
 Identities = 281/405 (69%), Positives = 323/405 (79%)
 Frame = +2

Query: 140  FNRLSLSCSSSAAXXXXXXXXXXXXXXXLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHG 319
            +  LS SC SS++                  S++ +  +K  +LKGMTY   Q WV SHG
Sbjct: 55   YRSLSFSCFSSSSSSSAAYLPSLEEYPSTKGSVARDDNQK-VILKGMTYAALQEWVQSHG 113

Query: 320  YRPGQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRK 499
            +RPGQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRK
Sbjct: 114  FRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRK 173

Query: 500  ILFTLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQA 679
            ILFTLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQA
Sbjct: 174  ILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQA 233

Query: 680  VFARRLLMSEVGSIANVVFMGMGEPLQNVDNVIKAIDIMVHDHGLHISPRKITVSTSGLV 859
            V+ARRLL  EVGSI NVVFMGMGEP  N+DNVIKA +IMV ++GLH SPRK+TVSTSGLV
Sbjct: 234  VYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLV 293

Query: 860  PQLKRFLRESNCALAVSLNATTDVARNWIMPINRKYNXXXXXXXXXXXXXXXHKYKVLFE 1039
            PQLKRFLRESNCALAVSLNATTD  RNWIMPINRKY                HKYKVLFE
Sbjct: 294  PQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLSSKHKYKVLFE 353

Query: 1040 YVLLAGVNDSIEDAKRLIDLVQGIPCKINLITFNPHSGSQFKPTSDEKMIEFRNILAAGG 1219
            YV+LAGVNDS++DA+RL++LVQGIPCKINLI FNPHSGSQF  T ++KMI+FRN+LA GG
Sbjct: 354  YVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGG 413

Query: 1220 CVVLLRPSRGNDQMAACGQLGNPGEIQAPLLRVPAQFQAALEAAV 1354
            C VL+R SRGNDQMAACGQLG  G +QAP++RVP QF+AAL+A+V
Sbjct: 414  CTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPEQFRAALKASV 458


>gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD protein in NDK-GCPE
            intergenic region gb|493519 from E. coli sequence
            gb|U02965 [Arabidopsis thaliana]
          Length = 454

 Score =  563 bits (1450), Expect = e-158
 Identities = 281/402 (69%), Positives = 320/402 (79%)
 Frame = +2

Query: 149  LSLSCSSSAAXXXXXXXXXXXXXXXLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHGYRP 328
            LS SC SS++                  S+  +  +K  VLKGMTY   Q WV SHG+RP
Sbjct: 54   LSFSCFSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQK-VVLKGMTYASLQEWVQSHGFRP 112

Query: 329  GQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRKILF 508
            GQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRKILF
Sbjct: 113  GQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILF 172

Query: 509  TLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFA 688
            TLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQAV+A
Sbjct: 173  TLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYA 232

Query: 689  RRLLMSEVGSIANVVFMGMGEPLQNVDNVIKAIDIMVHDHGLHISPRKITVSTSGLVPQL 868
            RRLL  EVGSI NVVFMGMGEP  N+DNVIKA +IMV ++GLH SPRK+TVSTSGLVPQL
Sbjct: 233  RRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLVPQL 292

Query: 869  KRFLRESNCALAVSLNATTDVARNWIMPINRKYNXXXXXXXXXXXXXXXHKYKVLFEYVL 1048
            KRFLRESNCALAVSLNATTD  RNWIMPINRKY                HKYKVLFEYV+
Sbjct: 293  KRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLSSRHKYKVLFEYVM 352

Query: 1049 LAGVNDSIEDAKRLIDLVQGIPCKINLITFNPHSGSQFKPTSDEKMIEFRNILAAGGCVV 1228
            LAGVNDS++DA+RL++LVQGIPCKINLI FNPHSGSQF  T ++KMI+FRN+LA GGC V
Sbjct: 353  LAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTV 412

Query: 1229 LLRPSRGNDQMAACGQLGNPGEIQAPLLRVPAQFQAALEAAV 1354
            L+R SRGNDQMAACGQLG  G +QAP++RVP QF+ AL+A+V
Sbjct: 413  LMRFSRGNDQMAACGQLGMIGAVQAPVMRVPEQFRTALKASV 454


>ref|NP_564755.1| radical SAM domain-containing protein [Arabidopsis thaliana]
            gi|15451230|gb|AAK96886.1| Unknown protein [Arabidopsis
            thaliana] gi|20148295|gb|AAM10038.1| unknown protein
            [Arabidopsis thaliana] gi|332195547|gb|AEE33668.1|
            radical SAM domain-containing protein [Arabidopsis
            thaliana]
          Length = 458

 Score =  563 bits (1450), Expect = e-158
 Identities = 281/402 (69%), Positives = 320/402 (79%)
 Frame = +2

Query: 149  LSLSCSSSAAXXXXXXXXXXXXXXXLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHGYRP 328
            LS SC SS++                  S+  +  +K  VLKGMTY   Q WV SHG+RP
Sbjct: 58   LSFSCFSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQK-VVLKGMTYASLQEWVQSHGFRP 116

Query: 329  GQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRKILF 508
            GQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRKILF
Sbjct: 117  GQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILF 176

Query: 509  TLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFA 688
            TLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQAV+A
Sbjct: 177  TLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYA 236

Query: 689  RRLLMSEVGSIANVVFMGMGEPLQNVDNVIKAIDIMVHDHGLHISPRKITVSTSGLVPQL 868
            RRLL  EVGSI NVVFMGMGEP  N+DNVIKA +IMV ++GLH SPRK+TVSTSGLVPQL
Sbjct: 237  RRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLVPQL 296

Query: 869  KRFLRESNCALAVSLNATTDVARNWIMPINRKYNXXXXXXXXXXXXXXXHKYKVLFEYVL 1048
            KRFLRESNCALAVSLNATTD  RNWIMPINRKY                HKYKVLFEYV+
Sbjct: 297  KRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLSSRHKYKVLFEYVM 356

Query: 1049 LAGVNDSIEDAKRLIDLVQGIPCKINLITFNPHSGSQFKPTSDEKMIEFRNILAAGGCVV 1228
            LAGVNDS++DA+RL++LVQGIPCKINLI FNPHSGSQF  T ++KMI+FRN+LA GGC V
Sbjct: 357  LAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTV 416

Query: 1229 LLRPSRGNDQMAACGQLGNPGEIQAPLLRVPAQFQAALEAAV 1354
            L+R SRGNDQMAACGQLG  G +QAP++RVP QF+ AL+A+V
Sbjct: 417  LMRFSRGNDQMAACGQLGMIGAVQAPVMRVPEQFRTALKASV 458


>ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cucumis
            sativus]
          Length = 482

 Score =  556 bits (1434), Expect = e-156
 Identities = 273/373 (73%), Positives = 308/373 (82%)
 Frame = +2

Query: 227  DKSISTNQTKKKAVLKGMTYTQFQRWVSSHGYRPGQALMLWKCLYGDNIWAQSIEDLEGL 406
            +K I       K +LKG++YT+ ++WV + GYRPGQALMLWK LYGDNIWA + ++LEGL
Sbjct: 107  EKEILNADFNSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGL 166

Query: 407  NKDFKKMLNKQAEFEVFKLKDILTASDGTRKILFTLDDGLVIETVVIPNDKGRTTVCVSS 586
            NKDFKKML + AEF    L++IL + DGTRKILF L+DGL+IETVVIP D+GRTTVCVSS
Sbjct: 167  NKDFKKMLIENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSS 226

Query: 587  QVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFARRLLMSEVGSIANVVFMGMGEPLQNV 766
            QVGCAMNCQFCYTGRMGLKR+LTAAEIVEQAVFARRLL SEVG I NVVFMGMGEPL N+
Sbjct: 227  QVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNI 286

Query: 767  DNVIKAIDIMVHDHGLHISPRKITVSTSGLVPQLKRFLRESNCALAVSLNATTDVARNWI 946
            DNVIKA++IMVH+ GLH SPRK+TVSTSGLVPQLKRFL E NCALAVSLNATTD  RNWI
Sbjct: 287  DNVIKAVNIMVHEQGLHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWI 346

Query: 947  MPINRKYNXXXXXXXXXXXXXXXHKYKVLFEYVLLAGVNDSIEDAKRLIDLVQGIPCKIN 1126
            MPINRKY                HKYKVLFEYV+LAGVNDSIEDAKR++DLVQGIPCKIN
Sbjct: 347  MPINRKYKLGLLLQTLREELRCKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKIN 406

Query: 1127 LITFNPHSGSQFKPTSDEKMIEFRNILAAGGCVVLLRPSRGNDQMAACGQLGNPGEIQAP 1306
            LI+FNPH GSQF+PT  EKMI FRN+LA  G  V LR SRG+DQMAACGQLG PG +QAP
Sbjct: 407  LISFNPHCGSQFRPTCKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAP 466

Query: 1307 LLRVPAQFQAALE 1345
            LLRVP +FQ A++
Sbjct: 467  LLRVPDRFQMAMK 479


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