BLASTX nr result
ID: Angelica23_contig00013626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00013626
(1048 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 98 2e-31
emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera] 98 3e-31
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 95 5e-24
ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|2... 92 5e-23
gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana] 86 4e-20
>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 97.8 bits (242), Expect(3) = 2e-31
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +3
Query: 6 PPPGVKFPKKTVTMGDLTPDPALWHEDSGRKPWENRRNNHQGAVSGRQLGDAAHRLVANS 185
PP GV FPKK V++GDL P+P LWHED+GR+PWEN R N G +SGRQLG+AAHRLV NS
Sbjct: 803 PPVGVTFPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNS 862
Score = 63.2 bits (152), Expect(3) = 2e-31
Identities = 52/156 (33%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Frame = +2
Query: 245 LVANSLHMKTDRNVNGDH-YVRPPY-ATSHGPTFPSNQTNGPHGQE-------------- 376
LV NSL +K +RN GD + PPY A +GP S N H QE
Sbjct: 858 LVVNSLQVKAERNGFGDQMHAPPPYPAAPYGPPLSSYSDNRYHNQEHHRMALPRPDYSDQ 917
Query: 377 ----------------HSYKQPYASSSTRHPHNQHHPQLDRNRGYPAQGYYSQGSHQN-G 505
H Y QP+ASS+T H +N+ P GYY G HQN G
Sbjct: 918 TYRRSSNPASVRNHFDHRYDQPHASSATGHHYNRS----------PVHGYYQPGFHQNDG 967
Query: 506 YAYQPRGPHQAIRGPTPSSASSPYYQQGGYNNRGSY 613
Y PR Q + P+ A P QGG+N+ Y
Sbjct: 968 PGYHPR---QEAQTHIPAGAQLP--GQGGHNSHHGY 998
Score = 22.3 bits (46), Expect(3) = 2e-31
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 718 PQPYGNKFSALDKGTSR 768
PQ GN++S LD+ +R
Sbjct: 1039 PQQLGNQYSVLDRRANR 1055
>emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 97.8 bits (242), Expect(3) = 3e-31
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +3
Query: 6 PPPGVKFPKKTVTMGDLTPDPALWHEDSGRKPWENRRNNHQGAVSGRQLGDAAHRLVANS 185
PP GV FPKK V++GDL P+P LWHED+GR+PWEN R N G +SGRQLG+AAHRLV NS
Sbjct: 238 PPVGVTFPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNS 297
Score = 62.8 bits (151), Expect(3) = 3e-31
Identities = 52/156 (33%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Frame = +2
Query: 245 LVANSLHMKTDRNVNGDH-YVRPPY-ATSHGPTFPSNQTNGPHGQE-------------- 376
LV NSL +K +RN GD + PPY A +GP S N H QE
Sbjct: 293 LVVNSLQVKAERNGFGDQMHAPPPYPAAPYGPPLSSYSDNRYHNQEHHRMALPRPDYSDQ 352
Query: 377 ----------------HSYKQPYASSSTRHPHNQHHPQLDRNRGYPAQGYYSQGSHQN-G 505
H Y QP+ASS+T H +N+ P GYY G HQN G
Sbjct: 353 TYRRSSNPASVRNHFDHRYDQPHASSATGHHYNRS----------PVHGYYQPGFHQNDG 402
Query: 506 YAYQPRGPHQAIRGPTPSSASSPYYQQGGYNNRGSY 613
Y PR Q + P+ A P QGG+N+ Y
Sbjct: 403 PGYHPR---QEAQTHIPAGAXLP--GQGGHNSHHGY 433
Score = 22.3 bits (46), Expect(3) = 3e-31
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 718 PQPYGNKFSALDKGTSR 768
PQ GN++S LD+ +R
Sbjct: 474 PQQLGNQYSVLDRRANR 490
>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1113
Score = 94.7 bits (234), Expect(2) = 5e-24
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +3
Query: 6 PPPGVKFPKKTVTMGDLTPDPALWHEDSGRKPWENRRNNHQGAVSGRQLGDAAHRLVANS 185
PP GV FPKK V + DL PDP LWHEDSGRKPWE+ R N G +SGRQLG+A+HRLV NS
Sbjct: 816 PPAGVIFPKKIVNVVDLKPDPVLWHEDSGRKPWESDRRNPPGTISGRQLGEASHRLVVNS 875
Score = 43.5 bits (101), Expect(2) = 5e-24
Identities = 48/154 (31%), Positives = 57/154 (37%), Gaps = 35/154 (22%)
Frame = +2
Query: 245 LVANSLHMKTDRN--VNGDHYVRPPY-ATSHGPTFPSNQTNGPH---------------- 367
LV NSL MK D N N H PPY AT+H P S+ NG H
Sbjct: 871 LVVNSLQMKVDHNGYANHLHAPIPPYAATAHVPVH-SSYANGSHDPRRDRTGQPRMDYSH 929
Query: 368 ------------GQEHSYKQPYASSSTRHPHNQHHPQLDR----NRGYPAQGYYSQGSHQ 499
H Y Q YAS H + PQ +R N + Q Y HQ
Sbjct: 930 AGQNRFFNPTQYNNNHGYGQSYASPGNAH-FSGSRPQYERENRSNGQHSRQVYLQPEFHQ 988
Query: 500 NGYAYQPRGPHQAIRGPTPSSASSPYYQQGGYNN 601
NG PR H ++ G + S A Y GY +
Sbjct: 989 NG----PRYLHGSMAGTSESYAYQDDYD--GYQS 1016
>ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|222856368|gb|EEE93915.1|
predicted protein [Populus trichocarpa]
Length = 998
Score = 91.7 bits (226), Expect(2) = 5e-23
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Frame = +3
Query: 3 HPPPGVKFPKKTVTMGDLTPDPALWHEDSGRKPWEN-RRNNH---QGAVSGRQLGDAAHR 170
+PP GV FPKK V GDL PDP LWHE+SGR+PWEN RRN H G ++GR LG+A+HR
Sbjct: 804 YPPVGVIFPKKIVDQGDLKPDPVLWHEESGRRPWENDRRNPHGNPHGTIAGRHLGEASHR 863
Query: 171 LVANS 185
LVANS
Sbjct: 864 LVANS 868
Score = 43.1 bits (100), Expect(2) = 5e-23
Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 33/134 (24%)
Frame = +2
Query: 245 LVANSLHMKTDRNVNGDHYVRPP---YATSHGPTFPSN----QTNGPHG----------- 370
LVANSLH+K DRN +H PP A GP S GPHG
Sbjct: 864 LVANSLHLKGDRNGYSNHMHGPPQPYIAAPRGPPLSSYSNGLHNQGPHGTLRPRGDYSHA 923
Query: 371 -------------QEHSYKQPYASSSTRHPHNQHHPQLD-RNRGYPAQGYYSQGSHQN-G 505
+ Y +PYAS+ ++ PQ + NR S GSHQ G
Sbjct: 924 GYPRSTSPRIPPHHDRGYVEPYASAGPNPSYSGRLPQYESENR--------SAGSHQQWG 975
Query: 506 YAYQPRGPHQAIRG 547
+ P H RG
Sbjct: 976 GRFPPPANHNNPRG 989
>gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 86.3 bits (212), Expect(2) = 4e-20
Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 14/74 (18%)
Frame = +3
Query: 6 PPPGVKFPKKTVTMGDLTPDPALWHEDSGRKPWENR--------------RNNHQGAVSG 143
PPPGV FPKKTV +GDL P PALWHED+GR+P N R N G+VSG
Sbjct: 808 PPPGVIFPKKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQNPPGSVSG 867
Query: 144 RQLGDAAHRLVANS 185
R LG+AAHRLV+NS
Sbjct: 868 RHLGNAAHRLVSNS 881
Score = 38.9 bits (89), Expect(2) = 4e-20
Identities = 37/130 (28%), Positives = 48/130 (36%)
Frame = +2
Query: 245 LVANSLHMKTDRNVNGDHYVRPPYATSHGPTFPSNQTNGPHGQEHSYKQPYASSSTRHPH 424
LV+NSL M TDR Y T P N P ++ PY P
Sbjct: 877 LVSNSLQMGTDR-----------YQTPTDVPAPGYGYNPP---QYVPPIPYQHGGYMAPP 922
Query: 425 NQHHPQLDRNRGYPAQGYYSQGSHQNGYAYQPRGPHQAIRGPTPSSASSPYYQQGGYNNR 604
AQGY +QN YQPRGP G PS ++G + +R
Sbjct: 923 G-------------AQGYAQPAPYQNRGGYQPRGP----SGRFPSEPYQSQSREGQHASR 965
Query: 605 GSYHGGNYNH 634
G + GN+ +
Sbjct: 966 GGGYSGNHQN 975