BLASTX nr result

ID: Angelica23_contig00013625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013625
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   153   1e-35
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   129   2e-28
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ...    94   2e-17
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...    92   5e-17
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob...    88   7e-16

>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score =  153 bits (387), Expect = 1e-35
 Identities = 80/92 (86%), Positives = 85/92 (92%)
 Frame = -3

Query: 278 HENVTKLVLVTLQDGVEKGRGFSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVN 99
           +ENVT+LV VTL+DG+E+GR FSN  KDPMTSKELNEEPYEVKIS T L SGSKGDLSVN
Sbjct: 2   NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61

Query: 98  FSTITPKKPNSALRKVARVRLTSGFEITAYIP 3
           FSTITPKKPNSALRKVARVRLTSGFEITAYIP
Sbjct: 62  FSTITPKKPNSALRKVARVRLTSGFEITAYIP 93


>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 127

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/77 (87%), Positives = 70/77 (90%)
 Frame = -3

Query: 233 VEKGRGFSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNFSTITPKKPNSALRK 54
           +E+GR FSN  KDPMTSKELNEEPYEV+IS T L SG KGDLSVNFSTITPKKPNSALRK
Sbjct: 1   MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60

Query: 53  VARVRLTSGFEITAYIP 3
           VARVRLTSGFEITAYIP
Sbjct: 61  VARVRLTSGFEITAYIP 77


>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
           gi|350996572|gb|AEQ37083.1| ribosomal protein S12
           [Datura stramonium]
          Length = 137

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/51 (94%), Positives = 48/51 (94%)
 Frame = -3

Query: 155 VKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIP 3
           V ISCT L SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIP
Sbjct: 37  VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIP 87


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355488626|gb|AES69829.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 51/71 (71%), Positives = 53/71 (74%)
 Frame = -3

Query: 215 FSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRL 36
           FSN  KDP+TSKELNE+               K DLSVNFSTITPKKPNSALRKVARVRL
Sbjct: 62  FSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRL 106

Query: 35  TSGFEITAYIP 3
           TSGFEITAYIP
Sbjct: 107 TSGFEITAYIP 117


>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
           gi|350996664|gb|AEQ37174.1| ribosomal protein S12
           (chloroplast) [Ginkgo biloba]
          Length = 141

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 45/51 (88%), Positives = 46/51 (90%)
 Frame = -3

Query: 155 VKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIP 3
           V ISCT L SG KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIP
Sbjct: 37  VYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIP 87


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