BLASTX nr result

ID: Angelica23_contig00013533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013533
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei...   155   1e-35
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
gb|AFK40678.1| unknown [Lotus japonicus]                              147   4e-33
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...   144   4e-32
ref|XP_002888931.1| RNA recognition motif-containing protein [Ar...   132   8e-29

>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|296088019|emb|CBI35302.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  155 bits (392), Expect = 1e-35
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = -3

Query: 620 RLYVSGLSFRTTQEGLRNAFEKFGNLTEVNLVMDKIANRPRGFAFLRYTTEEESKKAIEG 441
           RLYVSGLSFRTT+E LRNAFE FG L EVNLVMDKIANRPRGFAFLRY+TEEES+KAIEG
Sbjct: 80  RLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEG 139

Query: 440 MHGKFLDGRVIFVEVAKPISELRKSQNR 357
           MHGKFLDGRVIFVEVAKP SELR++QN+
Sbjct: 140 MHGKFLDGRVIFVEVAKPRSELRQNQNQ 167


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  147 bits (372), Expect = 2e-33
 Identities = 76/112 (67%), Positives = 85/112 (75%)
 Frame = -3

Query: 683 VACLDXXXXXXXXXXXXXXXTRLYVSGLSFRTTQEGLRNAFEKFGNLTEVNLVMDKIANR 504
           +ACL                T+LYVSGLSFRTT+E LRNAF+ FG L +VNLVMDK+A R
Sbjct: 70  LACLPSSASSPSSFGFNFRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKR 129

Query: 503 PRGFAFLRYTTEEESKKAIEGMHGKFLDGRVIFVEVAKPISELRKSQNRNSR 348
           PRGFAFLRY TEEE++KAIEGMHGKFLDGRVIFVEVAKP SELR+S N   R
Sbjct: 130 PRGFAFLRYETEEEAQKAIEGMHGKFLDGRVIFVEVAKPRSELRQSHNYGHR 181


>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score =  147 bits (370), Expect = 4e-33
 Identities = 72/90 (80%), Positives = 80/90 (88%)
 Frame = -3

Query: 620 RLYVSGLSFRTTQEGLRNAFEKFGNLTEVNLVMDKIANRPRGFAFLRYTTEEESKKAIEG 441
           RLYVSGLSFRTT+E LRN F+ FG L +VNLVMDK+ANRPRGFAFLRY TEEES+KAIEG
Sbjct: 95  RLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEG 154

Query: 440 MHGKFLDGRVIFVEVAKPISELRKSQNRNS 351
           MHGKFLDGRVIFVEVAKP SELR+   +N+
Sbjct: 155 MHGKFLDGRVIFVEVAKPRSELRQRFQQNT 184


>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score =  144 bits (362), Expect = 4e-32
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = -3

Query: 620 RLYVSGLSFRTTQEGLRNAFEKFGNLTEVNLVMDKIANRPRGFAFLRYTTEEESKKAIEG 441
           +LYVSGLSFRTT+E LRNAF+ FG L EV LVMD+IANRPRGFAFLRY TEEES+KAIEG
Sbjct: 89  KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 148

Query: 440 MHGKFLDGRVIFVEVAKPISELRKSQNRNSR 348
           MHGKFLDGRVIFVEVAKP SEL   +  ++R
Sbjct: 149 MHGKFLDGRVIFVEVAKPRSELAPRKQEDTR 179


>ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334772|gb|EFH65190.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 181

 Score =  132 bits (333), Expect = 8e-29
 Identities = 67/113 (59%), Positives = 82/113 (72%)
 Frame = -3

Query: 695 GFQFVACLDXXXXXXXXXXXXXXXTRLYVSGLSFRTTQEGLRNAFEKFGNLTEVNLVMDK 516
           GF   +CL                T+LYVSGLSFRTT++ LR+ FE+FG L  +NLVMDK
Sbjct: 53  GFLITSCLSPDSSSSPPSSPSGTKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDK 112

Query: 515 IANRPRGFAFLRYTTEEESKKAIEGMHGKFLDGRVIFVEVAKPISELRKSQNR 357
           +ANRPRGFAFLRY TEEE+ KAI+GMHGKFLDGRVIFVE AK  S++ +++ R
Sbjct: 113 VANRPRGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTRSDISRAKPR 165


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