BLASTX nr result

ID: Angelica23_contig00013389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013389
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    63   3e-08
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -3

Query: 446 LSVSINATPESKVANSPGARTPGLMAVGTPATKEGARVSKKRKCIYDANEIVITNEVYKG 267
           LSV+++ TP  +  N+ GA TP +  + TPA KEGARV +KRKC++D + IV  N V K 
Sbjct: 407 LSVTLDTTPRPRFPNASGAMTPEISVIPTPAAKEGARVPRKRKCVFD-DTIVFPNNVIKQ 465

Query: 266 GLDDVNE 246
            ++D ++
Sbjct: 466 CIEDSSD 472


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = -3

Query: 482 KIQIISPKIPVSLSVSINATPESKVANSPGARTPGLMAVGTPATKEGARVSKKRKCIYDA 303
           K Q++S   P  L + ++ATP+SK  +  GA TP  M + TPA KE AR  +KRKC +D 
Sbjct: 340 KQQLVSEDHP--LYIKLDATPQSKFKDVSGANTPEFMVISTPAAKEHARALRKRKCFFD- 396

Query: 302 NEIVITNEVYKGGLDDVNEGARALNKQKCLYDANEIIIKNEVYKAGLDDPSALVKKRKKT 123
           + +V  N V K                +C+ +  +++ K          P       K  
Sbjct: 397 DVVVFPNNVIK----------------ECIENTGDLVSKRRKL------PHTAFAVWKAC 434

Query: 122 ALHNNANQMSEKIFSQPLVPGVSINF-SLLREKEQKSP 12
              N      +K F +PL+P  S+   SL R K+ + P
Sbjct: 435 RFSN-----LDKCFLEPLIPCASLELGSLFRTKKLQIP 467


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