BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013251
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   218   4e-55
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   210   1e-52
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   192   3e-47
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   190   1e-46
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   184   5e-45

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  218 bits (555), Expect = 4e-55
 Identities = 101/117 (86%), Positives = 105/117 (89%), Gaps = 1/117 (0%)
 Frame = +2

Query: 128 MASTPMLPPN-AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFAL 304
           MASTPM PPN AAGNPNFDGN  A P PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFAL
Sbjct: 1   MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60

Query: 305 SPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEK 475
           SPFYDWTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEK
Sbjct: 61  SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEK 117


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  210 bits (534), Expect = 1e-52
 Identities = 97/112 (86%), Positives = 101/112 (90%), Gaps = 1/112 (0%)
 Frame = +2

Query: 143 MLPPN-AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 319
           M PPN AAGNPNFDGN  AAP PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 1   MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 320 WTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEK 475
           WTCNNE +R+RSIHPLD SHLSKMTG EY L+EVMEPHLFV RKQKRD PEK
Sbjct: 61  WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEK 112


>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 6-like [Cucumis sativus]
          Length = 260

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/118 (79%), Positives = 98/118 (83%), Gaps = 4/118 (3%)
 Frame = +2

Query: 134 STPMLPPNAAGNPNFDGNAR-AAPAPPGTDMT---GICFRDQLWLNTYPLDRNLVFDYFA 301
           +TP  P    G  NF+G    AAP PPGTDMT   GICFRDQLWLNTYPLDRNLVFDYFA
Sbjct: 2   ATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFDYFA 61

Query: 302 LSPFYDWTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEK 475
           LSPFYDWTCNNE +RMRSIHPLDLS LSKMTGIEY L+EVMEPHLFVFRKQKRD PEK
Sbjct: 62  LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEK 119


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/112 (80%), Positives = 98/112 (87%), Gaps = 2/112 (1%)
 Frame = +2

Query: 146 LPPNAAGNPNFDGN--ARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 319
           +PP A    NFDGN  A A P PPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYD
Sbjct: 4   VPPGA----NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYD 59

Query: 320 WTCNNETIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEK 475
           WTCNNE +R++SIHPLDLSHLSKMTG EY L+EV+EP+LFV RKQKRDSPEK
Sbjct: 60  WTCNNEQLRLQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEK 111


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/106 (80%), Positives = 92/106 (86%)
 Frame = +2

Query: 158 AAGNPNFDGNARAAPAPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE 337
           A GN   +G    AP PPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWTCNNE
Sbjct: 4   APGNQMLEGGG-GAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNE 62

Query: 338 TIRMRSIHPLDLSHLSKMTGIEYTLSEVMEPHLFVFRKQKRDSPEK 475
            +RMRS+HPLD+S LSKMTG EY LSEVMEPHLFV RKQKRDSP+K
Sbjct: 63  QLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDK 108