BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013248
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula...    80   4e-13
ref|XP_002321509.1| high mobility group family [Populus trichoca...    75   2e-11
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...    71   2e-10
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 70   4e-10
gb|AAA34051.1| DNA-binding protein, partial [Nicotiana tabacum]        70   4e-10

>ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula]
           gi|92870991|gb|ABE80152.1| High mobility group proteins
           HMG-I and HMG-Y; Linker histone, N-terminal [Medicago
           truncatula] gi|355525109|gb|AET05563.1| HMG-Y-related
           protein A [Medicago truncatula]
          Length = 422

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 45/123 (36%), Positives = 68/123 (55%)
 Frame = -1

Query: 722 KTRGRPRKNVGGVGSAIIVPLEGMGDAGRPSKLAVRRKPRKLSGKPLGRPKKGXXXXXXX 543
           + RGRP+K      S  +VP  G    GRP KLAV  +P+  SG+P+GRPK         
Sbjct: 227 RPRGRPKKY-----SDTVVPGAGATRRGRPKKLAVVGRPKNPSGRPIGRPKGAKGKKFVN 281

Query: 542 XXXXXXXXXXQDLKGRFEHFQTRVKHAVDVVKPYLSNEHAPVALGVLQEIEGLALMDVCA 363
                      DL+ + EHFQ++VK ++D++KP   ++    A+  +QE+E LA +D+ A
Sbjct: 282 E----------DLRRKLEHFQSKVKESLDILKPLFDHQSPATAVAAIQELEMLATLDLKA 331

Query: 362 PVR 354
           P+R
Sbjct: 332 PLR 334


>ref|XP_002321509.1| high mobility group family [Populus trichocarpa]
           gi|118481017|gb|ABK92462.1| unknown [Populus
           trichocarpa] gi|118487368|gb|ABK95512.1| unknown
           [Populus trichocarpa] gi|222868505|gb|EEF05636.1| high
           mobility group family [Populus trichocarpa]
          Length = 478

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
 Frame = -1

Query: 722 KTRGRPRKNVG----GVGSAIIVPLEGMGDAGRPSKLAV--RRKPRKLSGKPLGRPKKGX 561
           + RGRPRK       GVG+ ++         GRP KL V  + KP+K SG+P+GRP+K  
Sbjct: 302 RPRGRPRKGAALAAAGVGAVVVQAKR----PGRPPKLPVIMKPKPKKSSGRPVGRPRKNA 357

Query: 560 XXXXXXXXXXXXXXXXQ---DLKGRFEHFQTRVKHAVDVVKPYLSNEHAPVALGVLQEIE 390
                           +   DLK + E FQ+RVK A+ V+KP+L++     A+  +QE+E
Sbjct: 358 NAPWAITRASEPQAQAELHGDLKRKLEFFQSRVKQAIGVLKPHLTSATIS-AVAAIQELE 416

Query: 389 GLALMDVCAPVR 354
           GLA MD+  P R
Sbjct: 417 GLASMDINVPWR 428


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
 Frame = -1

Query: 722 KTRGRPRKNVGGVGSAIIVPLEG-------------MGDAGRPSKLAVRRKPRKLSGKPL 582
           + RGRP+K V G G+  +  + G             +   GRP KLAV R P+  + +P+
Sbjct: 247 RPRGRPKKIVAGAGAPALSSVGGAPRGRGRPRGVLPLVRPGRPQKLAVGR-PKNPARRPV 305

Query: 581 GRPKKGXXXXXXXXXXXXXXXXXQDLKGRFEHFQTRVKHAVDVVKPYLSNEHAPVALGVL 402
           GRPK                    DL+ + EHFQ++VK ++  +KPY ++E    A+  +
Sbjct: 306 GRPKGSTAAAITAHKAAND-----DLRRKLEHFQSKVKESLGTLKPYFNHESPVTAIAAI 360

Query: 401 QEIEGLALMDVCAPVR 354
           QE+E L+ +D+ AP+R
Sbjct: 361 QELEVLSTLDLKAPLR 376


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 43/114 (37%), Positives = 57/114 (50%)
 Frame = -1

Query: 722 KTRGRPRKNVGGVGSAIIVPLEGMGDAGRPSKLAVRRKPRKLSGKPLGRPKKGXXXXXXX 543
           K RGRP K+ G   +A  V                 ++PRKLSGKPLGRP+K        
Sbjct: 442 KRRGRPPKSYGAAAAAPTV-----------------KRPRKLSGKPLGRPRKNVTSPAVS 484

Query: 542 XXXXXXXXXXQDLKGRFEHFQTRVKHAVDVVKPYLSNEHAPVALGVLQEIEGLA 381
                      +LKG+ EH Q+R+K A + +KP L+ E   +AL  LQE+E LA
Sbjct: 485 DPKLVVAYE--ELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELA 536


>gb|AAA34051.1| DNA-binding protein, partial [Nicotiana tabacum]
          Length = 380

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 43/114 (37%), Positives = 57/114 (50%)
 Frame = -1

Query: 722 KTRGRPRKNVGGVGSAIIVPLEGMGDAGRPSKLAVRRKPRKLSGKPLGRPKKGXXXXXXX 543
           K RGRP K+ G   +A  V                 ++PRKLSGKPLGRP+K        
Sbjct: 276 KRRGRPPKSYGAAAAAPTV-----------------KRPRKLSGKPLGRPRKNVTSPAVS 318

Query: 542 XXXXXXXXXXQDLKGRFEHFQTRVKHAVDVVKPYLSNEHAPVALGVLQEIEGLA 381
                      +LKG+ EH Q+R+K A + +KP L+ E   +AL  LQE+E LA
Sbjct: 319 DPKLVVAYE--ELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELA 370