BLASTX nr result

ID: Angelica23_contig00013070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00013070
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   105   2e-20
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   105   2e-20
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   102   8e-20
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   101   2e-19

>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  105 bits (261), Expect = 2e-20
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = -2

Query: 687 IIRQREGL-RGFSLLRNEIQGMNQGSRNCSSAIQQEMSGKVIXXXXXXXXXXXXXXXXXX 511
           II+Q+ G  RGF+ +   +   ++          QE+SG+VI                  
Sbjct: 125 IIKQKNGRSRGFAFVT--MASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPG 182

Query: 510 XXPGQTRYTLYVANLAFKARNKDLREFFAATCKPLSVKVVFNTSKRNSTGYGFVSYATRE 331
             PG+T   LYV+NLA+K R+ +LR+FF+    P++ +VVF++    S GYGFVS+ATRE
Sbjct: 183 PPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATRE 242

Query: 330 EAETAISDLNGKEFLGRTIDVQFKSSSKAESIDESASKKENTLQEQPE 187
           EA+TA+S L GKE +GR + ++F       +++E+ + KE+ ++ QPE
Sbjct: 243 EAQTALSSLEGKELMGRPLRLKFSE----RNVNEAETPKEDIVESQPE 286


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  105 bits (261), Expect = 2e-20
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = -2

Query: 687 IIRQREGL-RGFSLLRNEIQGMNQGSRNCSSAIQQEMSGKVIXXXXXXXXXXXXXXXXXX 511
           II+Q+ G  RGF+ +   +   ++          QE+SG+VI                  
Sbjct: 119 IIKQKNGRSRGFAFVT--MASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPG 176

Query: 510 XXPGQTRYTLYVANLAFKARNKDLREFFAATCKPLSVKVVFNTSKRNSTGYGFVSYATRE 331
             PG+T   LYV+NLA+K R+ +LR+FF+    P++ +VVF++    S GYGFVS+ATRE
Sbjct: 177 PPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATRE 236

Query: 330 EAETAISDLNGKEFLGRTIDVQFKSSSKAESIDESASKKENTLQEQPE 187
           EA+TA+S L GKE +GR + ++F       +++E+ + KE+ ++ QPE
Sbjct: 237 EAQTALSSLEGKELMGRPLRLKFSE----RNVNEAETPKEDIVESQPE 280


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  102 bits (255), Expect = 8e-20
 Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
 Frame = -2

Query: 687 IIRQREGL-RGFSLLRNEIQGMNQGSRNCSSAIQQEMSGKVIXXXXXXXXXXXXXXXXXX 511
           II+Q+ G  RGF+ +   +    +           E+SG++I                  
Sbjct: 114 IIKQKNGRSRGFAFVT--LASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTG 171

Query: 510 XXPGQTRYTLYVANLAFKARNKDLREFFAATCKPLSVKVVFNTSKRNSTGYGFVSYATRE 331
               +TR+ +YV+NLA+K R+  LREFF+    P+S +VVF++    S+GYGFVS+ATRE
Sbjct: 172 TSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATRE 231

Query: 330 EAETAISDLNGKEFLGRTIDVQFKSSSKAESIDESASKKENTLQEQPE 187
           EAE AIS L+GKE +GR + ++F      ES  ES +++E  +++Q E
Sbjct: 232 EAEAAISALDGKELMGRPLRLKFSDRKTDES--ESENQEEENVEDQSE 277


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  101 bits (252), Expect = 2e-19
 Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = -2

Query: 501 GQTRYTLYVANLAFKARNKDLREFFAATCKPLSVKVVFNTSKRNSTGYGFVSYATREEAE 322
           G+TR+ LYV+NLA+K R+  LREFF++   P+SV+VVF++    S GYGF S+AT+EEAE
Sbjct: 154 GETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAE 213

Query: 321 TAISDLNGKEFLGRTIDVQFKSSSKAESIDESASKKE--NTLQEQPE 187
            AIS L+GKE +GR + ++F      ++IDES  +KE  +  + QPE
Sbjct: 214 AAISALDGKELMGRPVHLKF----SVKTIDESGDEKEEGDISEGQPE 256


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  101 bits (252), Expect = 2e-19
 Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = -2

Query: 501 GQTRYTLYVANLAFKARNKDLREFFAATCKPLSVKVVFNTSKRNSTGYGFVSYATREEAE 322
           G+TR+ LYV+NLA+K R+  LREFF++   P+SV+VVF++    S GYGF S+AT+EEAE
Sbjct: 184 GETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAE 243

Query: 321 TAISDLNGKEFLGRTIDVQFKSSSKAESIDESASKKE--NTLQEQPE 187
            AIS L+GKE +GR + ++F      ++IDES  +KE  +  + QPE
Sbjct: 244 AAISALDGKELMGRPVHLKF----SVKTIDESGDEKEEGDISEGQPE 286


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