BLASTX nr result

ID: Angelica23_contig00012484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012484
         (1886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   212   3e-52
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   212   3e-52
gb|AFK42285.1| unknown [Medicago truncatula]                          209   2e-51
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               209   2e-51
gb|AFK40862.1| unknown [Medicago truncatula]                          209   3e-51

>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  212 bits (539), Expect = 3e-52
 Identities = 105/161 (65%), Positives = 113/161 (70%)
 Frame = -3

Query: 780 AMQCQLVCTGCRTILLYPRGXXXXXXXXXXXXXXXXXPGLEMSQLICGGCRTLLMYTRGA 601
           AMQ QLVC GCR  LLYPRG                 PG++MSQL CGGCRTLLMYTRGA
Sbjct: 47  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 106

Query: 600 SSVRCSCCHTVNLVPASGQVAHVNCGNCRTTLMYPYGAPSVKCAVCQYVTNVNMGNARVP 421
           +SVRCSCCHTVNL P S QVAHV CGNCRTTLMYPYGAPSVKCAVC Y+TN+NM N R+P
Sbjct: 107 TSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLP 166

Query: 420 IHVLRPGGVXXXXXXXXXXXXXPRSQSQTVVVQNPMSVDES 298
           I   RP G              P+SQSQTVVV+NPMSVD S
Sbjct: 167 IPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSS 207


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  212 bits (539), Expect = 3e-52
 Identities = 105/161 (65%), Positives = 113/161 (70%)
 Frame = -3

Query: 780 AMQCQLVCTGCRTILLYPRGXXXXXXXXXXXXXXXXXPGLEMSQLICGGCRTLLMYTRGA 601
           AMQ QLVC GCR  LLYPRG                 PG++MSQL CGGCRTLLMYTRGA
Sbjct: 35  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 94

Query: 600 SSVRCSCCHTVNLVPASGQVAHVNCGNCRTTLMYPYGAPSVKCAVCQYVTNVNMGNARVP 421
           +SVRCSCCHTVNL P S QVAHV CGNCRTTLMYPYGAPSVKCAVC Y+TN+NM N R+P
Sbjct: 95  TSVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLP 154

Query: 420 IHVLRPGGVXXXXXXXXXXXXXPRSQSQTVVVQNPMSVDES 298
           I   RP G              P+SQSQTVVV+NPMSVD S
Sbjct: 155 IPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSS 195


>gb|AFK42285.1| unknown [Medicago truncatula]
          Length = 178

 Score =  209 bits (533), Expect = 2e-51
 Identities = 104/160 (65%), Positives = 111/160 (69%)
 Frame = -3

Query: 777 MQCQLVCTGCRTILLYPRGXXXXXXXXXXXXXXXXXPGLEMSQLICGGCRTLLMYTRGAS 598
           MQ QLVC GCR  LLYPRG                 PG++MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 597 SVRCSCCHTVNLVPASGQVAHVNCGNCRTTLMYPYGAPSVKCAVCQYVTNVNMGNARVPI 418
           SVRCSCCHTVNL P S QVAHV CGNCRTTLMYPYGAPSVKCAVC Y+TN+NM N R PI
Sbjct: 61  SVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRFPI 120

Query: 417 HVLRPGGVXXXXXXXXXXXXXPRSQSQTVVVQNPMSVDES 298
              RP G              P+SQSQTVVV+NPMSVD S
Sbjct: 121 PGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSS 160


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  209 bits (532), Expect = 2e-51
 Identities = 102/160 (63%), Positives = 111/160 (69%)
 Frame = -3

Query: 777 MQCQLVCTGCRTILLYPRGXXXXXXXXXXXXXXXXXPGLEMSQLICGGCRTLLMYTRGAS 598
           MQ QLVC GCR +LLYPRG                 PG++MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 597 SVRCSCCHTVNLVPASGQVAHVNCGNCRTTLMYPYGAPSVKCAVCQYVTNVNMGNARVPI 418
           SVRCSCCHTVNL P S QVAHV C NCRTTLMYPYGAPSVKCAVC Y+TN+NM N RVP+
Sbjct: 61  SVRCSCCHTVNLAPVSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVPV 120

Query: 417 HVLRPGGVXXXXXXXXXXXXXPRSQSQTVVVQNPMSVDES 298
              RP G              P+SQ QTVVV+NPMSVD S
Sbjct: 121 PANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDSS 160


>gb|AFK40862.1| unknown [Medicago truncatula]
          Length = 176

 Score =  209 bits (531), Expect = 3e-51
 Identities = 103/160 (64%), Positives = 111/160 (69%)
 Frame = -3

Query: 777 MQCQLVCTGCRTILLYPRGXXXXXXXXXXXXXXXXXPGLEMSQLICGGCRTLLMYTRGAS 598
           MQ QLVC GCR  LLYPRG                 PG++MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 597 SVRCSCCHTVNLVPASGQVAHVNCGNCRTTLMYPYGAPSVKCAVCQYVTNVNMGNARVPI 418
           SVRCSCCHTVNL P S QVAHV CGNCRTTLMYPYGAPSVKC VC Y+TN+NM N R+PI
Sbjct: 61  SVRCSCCHTVNLAPVSNQVAHVPCGNCRTTLMYPYGAPSVKCVVCHYITNINMSNGRLPI 120

Query: 417 HVLRPGGVXXXXXXXXXXXXXPRSQSQTVVVQNPMSVDES 298
              RP G              P+SQSQTVVV+NPMSVD S
Sbjct: 121 PGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSS 160


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