BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012463
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...   206   8e-51
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...   205   2e-50
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     203   7e-50
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   196   8e-48
ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|2...   190   6e-46

>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  206 bits (524), Expect = 8e-51
 Identities = 121/299 (40%), Positives = 171/299 (57%), Gaps = 1/299 (0%)
 Frame = -2

Query: 1047 LSHLHGKLSISSNVCSPILNRSRSFYRPIVAVAATIMEKRNKSYWAAIETQIDTHLKKSI 868
            L+H + K  +  ++      R  +  RP++         R ++Y A IE+ I+++LKK+I
Sbjct: 5    LTHFNTKSGLFPSITKSKTTRPST--RPVILAMT-----RTQTYRATIESDIESYLKKAI 57

Query: 867  PIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXXXXXXXXXXXXXXXAYTHQ 688
            PIR P SVFEPMHHLTF+A +++A  LC+AACELV                    AYTH+
Sbjct: 58   PIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHE 117

Query: 687  HLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLSKQ-AHKNPDMILRMIIEI 511
            +L L+DGPM   S ++H F  NIELL  DG++P G EL+  S      NPD ILR IIE+
Sbjct: 118  NLPLTDGPMS-KSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIEL 176

Query: 510  SRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEGELHXXXXXXXXXXXXGSEEEI 331
            +R +GS+GIV+G YHE+  G +Q  D E+++YVC+KKEG LH              E++I
Sbjct: 177  TRVMGSEGIVEGQYHEL--GLNQLNDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKI 234

Query: 330  EKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXXXXXEFFDGRNVEEISTLLEI 154
            EKLR++GLYVG +QG+   +GKN  G    +           E F G  +E I  + E+
Sbjct: 235  EKLRRFGLYVGTVQGL---LGKNRSGFEGRIKELKELAVKELESFGGEKIELIRGVFEL 290


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score =  205 bits (521), Expect = 2e-50
 Identities = 115/260 (44%), Positives = 157/260 (60%), Gaps = 1/260 (0%)
 Frame = -2

Query: 930 RNKSYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXX 751
           R ++Y A IE+ I+++LKK+IPIR P SVFEPMHHLTF+A +++A  LC+AACELV    
Sbjct: 5   RTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDR 64

Query: 750 XXXXXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELL 571
                           AYTH++L L+DGPM   S ++H F  NIELL  DG++P G EL+
Sbjct: 65  SDAMAAAAAVHLMHVAAYTHENLPLTDGPMS-KSEIQHKFDPNIELLTGDGIIPFGLELM 123

Query: 570 GLSKQ-AHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEG 394
             S      NPD ILR IIE++R +GS+GIV+G YHE+  G +Q  D E+++YVC+KKEG
Sbjct: 124 ARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHEL--GLNQLNDLELIEYVCKKKEG 181

Query: 393 ELHXXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXX 214
            LH              E++IEKLR++GLYVG +QG+   +GKN  G    +        
Sbjct: 182 TLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGL---LGKNRSGFEGRIKELKELAV 238

Query: 213 XXXEFFDGRNVEEISTLLEI 154
              E F G  +E I  + E+
Sbjct: 239 KELESFGGEKIELIRGVFEL 258


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  203 bits (516), Expect = 7e-50
 Identities = 127/310 (40%), Positives = 175/310 (56%), Gaps = 8/310 (2%)
 Frame = -2

Query: 1062 MAATKLSHLHGKLSI----SSNVCSPILNRSRSFYRPIVAVAATIMEKRNKSYWAAIETQ 895
            MA    S +HG L      SSN   P+ +     +RP+V   +T     ++SYW+++   
Sbjct: 1    MAGALSSTIHGNLIARAVSSSNPKHPLFS-----HRPMVVAMST-----DQSYWSSVNAD 50

Query: 894  IDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXXXXXXXXXXX 715
            +DTHLK++IPIR P +VFEPM HL  SA +++AP LCIAACELV                
Sbjct: 51   LDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRL 110

Query: 714  XXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLSKQ-AHKNPD 538
                A TH++L L+D P  +  T   ++  NIELLI DG++P GFELL      A  N +
Sbjct: 111  VHASASTHENLPLTDRPRPMPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSN 170

Query: 537  MILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKY---VCEKKEGELHXXXXXX 367
             +LR IIEISRA+GSQG+++G Y+E    ES+GE+   V +   VC KKEG LH      
Sbjct: 171  RVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGAC 230

Query: 366  XXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXXXXXEFFDGR 187
                  GSE+EIEKLR+YGLYVGM+QG+++ V +  +   K V           + F+  
Sbjct: 231  GAILGGGSEDEIEKLRRYGLYVGMVQGILSKVDERKEWPVKEVNKLRDLALKELKDFNQA 290

Query: 186  NVEEISTLLE 157
             V+ IS L+E
Sbjct: 291  KVKTISILVE 300


>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  196 bits (498), Expect = 8e-48
 Identities = 114/243 (46%), Positives = 145/243 (59%), Gaps = 6/243 (2%)
 Frame = -2

Query: 948 ATIMEKRNK-SYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAAC 772
           A +M   +K  YW  I   I+THLK++IP+RPP  VFEPMHHLTF+A +S AP LCIAAC
Sbjct: 37  ACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAAC 96

Query: 771 ELVXXXXXXXXXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTV-EHMFMTNIELLIPDGM 595
           ELV                    A+TH+++ L+D P      +  H F  NIELL  DGM
Sbjct: 97  ELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGM 156

Query: 594 VPLGFELLG-LSKQAHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVK 418
           +P  FELL  L+  A  N D ILR++IEISRA+GSQG+V+G Y+E    +S G++   V 
Sbjct: 157 IPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVA 216

Query: 417 Y---VCEKKEGELHXXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRF 247
           +   VC+KKEG  H            G+EEEIEKLR+YGLYVG IQG+ N V  N +   
Sbjct: 217 WLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNKVEGNEEWSL 276

Query: 246 KIV 238
           K V
Sbjct: 277 KEV 279


>ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|222869068|gb|EEF06199.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  190 bits (482), Expect = 6e-46
 Identities = 103/216 (47%), Positives = 136/216 (62%), Gaps = 1/216 (0%)
 Frame = -2

Query: 921 SYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXX 742
           SYW ++  +ID HLK++IPIRPP SVFEPMHHLTF+A ++TAP LCIAACELV       
Sbjct: 1   SYWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQA 60

Query: 741 XXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLS 562
                        A TH+H+  +     +G    H F +NIELL  DGMVP G ELL  S
Sbjct: 61  MAAASALRLMHAAALTHEHILSTGNRARIG----HSFGSNIELLTGDGMVPFGLELLAKS 116

Query: 561 KQ-AHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEGELH 385
                 N + ILR+IIEI++A+GSQG+  G Y++   G+S     + + +VC+KKEGELH
Sbjct: 117 DDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQS-----DYIDHVCKKKEGELH 171

Query: 384 XXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVN 277
                       G+EEEIEKLR+YGLYVG++QG+++
Sbjct: 172 SCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLS 207