BLASTX nr result

ID: Angelica23_contig00012455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012455
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...   109   2e-22
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002327561.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002301651.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
gb|ABI23000.1| putative RNA-binding protein [Ammopiptanthus mong...   103   1e-20

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = -2

Query: 394  GLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREMS 218
            GLGKDGSGM+EPVQAQ+ EKRAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFREMS
Sbjct: 901  GLGKDGSGMIEPVQAQATEKRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFREMS 959


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/59 (88%), Positives = 57/59 (96%)
 Frame = -2

Query: 394  GLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREMS 218
            GLGKDG GMVEPVQAQ++++RAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFREMS
Sbjct: 965  GLGKDGGGMVEPVQAQAIDRRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFREMS 1023


>ref|XP_002327561.1| predicted protein [Populus trichocarpa] gi|222836115|gb|EEE74536.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = -2

Query: 394  GLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREM 221
            GLGKDG GMVEPVQAQ++++RAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFREM
Sbjct: 931  GLGKDGGGMVEPVQAQAIDRRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFREM 988


>ref|XP_002301651.1| predicted protein [Populus trichocarpa] gi|222843377|gb|EEE80924.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -2

Query: 394 GLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREM 221
           GLGKDG GM+EPVQAQ++++RAGLGSQ KKLDPSLEVQAGDSY+TLIQKKALARFREM
Sbjct: 406 GLGKDGGGMIEPVQAQAIDRRAGLGSQQKKLDPSLEVQAGDSYKTLIQKKALARFREM 463


>gb|ABI23000.1| putative RNA-binding protein [Ammopiptanthus mongolicus]
          Length = 264

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -2

Query: 394 GLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREMS 218
           GLGKDGSGM+EPVQ Q+VE RAGLGSQ KKLDPSLEVQAGDSY+ LI KKALARFREMS
Sbjct: 204 GLGKDGSGMIEPVQTQAVENRAGLGSQQKKLDPSLEVQAGDSYKMLIHKKALARFREMS 262


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