BLASTX nr result

ID: Angelica23_contig00012402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012402
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   167   2e-39
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   153   2e-35
gb|ACU20250.1| unknown [Glycine max]                                  152   7e-35
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   148   8e-34
ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M...   148   8e-34

>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  167 bits (422), Expect = 2e-39
 Identities = 86/129 (66%), Positives = 94/129 (72%)
 Frame = -3

Query: 532 YRERSRSYSPKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLLVRNISLTARPEDLR 353
           YR RSRSYSP+R+                              GLLVRNI+L ARPEDLR
Sbjct: 4   YRSRSRSYSPRRSRTPPRRRRFDDRSRPSRSYRDRRSPAPS--GLLVRNIALDARPEDLR 61

Query: 352 IPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIAIVFAA 173
           +PFERFGPVKDVYLPKNYYTGE RGFGFVKFRN+EDAAEAKHHLN +VIGGR+IAIVFA 
Sbjct: 62  VPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHLNHSVIGGREIAIVFAE 121

Query: 172 ENRKTPQDM 146
           ENRKTPQ+M
Sbjct: 122 ENRKTPQEM 130


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  153 bits (387), Expect = 2e-35
 Identities = 84/133 (63%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
 Frame = -3

Query: 532 YRERSRSYSPKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----GLLVRNISLTARP 365
           YR RSRSYSP+R                              S    GLLVRN+ L ARP
Sbjct: 4   YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARP 63

Query: 364 EDLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIAI 185
           EDLRIPFERFGPVKDVYLPKNYYTGE RGFGFVKFR +EDAAEAK  LN TVIGGR+I I
Sbjct: 64  EDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRI 123

Query: 184 VFAAENRKTPQDM 146
           VFA ENRKTPQ+M
Sbjct: 124 VFAEENRKTPQEM 136


>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  152 bits (383), Expect = 7e-35
 Identities = 81/132 (61%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
 Frame = -3

Query: 532 YRERSRSYSPKR---TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLLVRNISLTARPE 362
           YR RSRSYSP+R   +                             SGLLVRN+ L ARPE
Sbjct: 4   YRSRSRSYSPRRRSRSPPAPRGRKRYVDDRYGDSRSYRDRRSPLPSGLLVRNLPLDARPE 63

Query: 361 DLRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIAIV 182
           DLRIPFER+GPVKDVYLPKNYYTGE RGFGFVK+R  EDAAEAK HLN T+IGGR+I IV
Sbjct: 64  DLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGGREIRIV 123

Query: 181 FAAENRKTPQDM 146
           FA ENRKT Q+M
Sbjct: 124 FAEENRKTSQEM 135


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  148 bits (374), Expect = 8e-34
 Identities = 78/131 (59%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
 Frame = -3

Query: 532 YRERSRSYSPKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--GLLVRNISLTARPED 359
           YR RSRSYSP+R                                 GLLVRN+ L ARPED
Sbjct: 4   YRSRSRSYSPRRRSRTPPPRGRKRYEDDRYPDNRSRRDRRSPLPSGLLVRNLPLDARPED 63

Query: 358 LRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIAIVF 179
           LR PFER+GPVKDVYLP+NYYTGE RGFGFVK+R+ EDAAEAK  LN T+IGGR+I IVF
Sbjct: 64  LRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVF 123

Query: 178 AAENRKTPQDM 146
           A ENRKTPQ+M
Sbjct: 124 AEENRKTPQEM 134


>ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510620|gb|AES91762.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 314

 Score =  148 bits (374), Expect = 8e-34
 Identities = 78/131 (59%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
 Frame = -3

Query: 532 YRERSRSYSPKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--GLLVRNISLTARPED 359
           YR RSRSYSP+R                                 GLLVRN+ L ARPED
Sbjct: 4   YRSRSRSYSPRRRSRTPPPRGRKRYEDDRYPDNRSRRDRRSPLPSGLLVRNLPLDARPED 63

Query: 358 LRIPFERFGPVKDVYLPKNYYTGEARGFGFVKFRNSEDAAEAKHHLNDTVIGGRQIAIVF 179
           LR PFER+GPVKDVYLP+NYYTGE RGFGFVK+R+ EDAAEAK  LN T+IGGR+I IVF
Sbjct: 64  LRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVF 123

Query: 178 AAENRKTPQDM 146
           A ENRKTPQ+M
Sbjct: 124 AEENRKTPQEM 134


Top