BLASTX nr result

ID: Angelica23_contig00012384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012384
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiq...    62   5e-08
ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus commun...    61   1e-07
ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arab...    58   9e-07
ref|XP_002276087.1| PREDICTED: probable NADH dehydrogenase [ubiq...    58   9e-07
ref|NP_680745.1| uncharacterized protein [Arabidopsis thaliana] ...    57   2e-06

>ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus] gi|449485470|ref|XP_004157179.1| PREDICTED:
           probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus]
          Length = 168

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +2

Query: 2   DAPVPKHVPLHRPGPLPEEFYKTLETITTGTLEDITIKKK 121
           DAPVPKH+PLHRPGPLPEEFYKTLE I+  + + +   +K
Sbjct: 123 DAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEK 162


>ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223547542|gb|EEF49037.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 166

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +2

Query: 2   DAPVPKHVPLHRPGPLPEEFYKTLETITTGTLEDIT 109
           DAPVPKHVPLHRPGPLPEEFYKTLE + +     +T
Sbjct: 123 DAPVPKHVPLHRPGPLPEEFYKTLEAVQSKDAPAVT 158


>ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp.
           lyrata] gi|297310033|gb|EFH40457.1| hypothetical protein
           ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   DAPVPKHVPLHRPGPLPEEFYKTLETITTGTLEDI-TIKKKDPSI 133
           DAP+PKHVP HRPGPLPEEFYKTLE +   +  +I      DP +
Sbjct: 123 DAPIPKHVPQHRPGPLPEEFYKTLEGLLAESKTEIPAASSSDPQL 167


>ref|XP_002276087.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial [Vitis vinifera]
           gi|302143765|emb|CBI22626.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 2   DAPVPKHVPLHRPGPLPEEFYKTLETIT 85
           DAP+PKHVP HRPGPLPEEFY TLE +T
Sbjct: 123 DAPIPKHVPQHRPGPLPEEFYNTLEAVT 150


>ref|NP_680745.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332660019|gb|AEE85419.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 115

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
 Frame = +2

Query: 5   APVPKHVPLHRPGPLPEEFYKTLETITTGTLEDIT-IKKKDPSI 133
           AP+PKHVP HRPGPLPEEFY+TL+ + + +  +IT     DP +
Sbjct: 70  APIPKHVPHHRPGPLPEEFYRTLQAVNSESKTEITATSSSDPQL 113


Top