BLASTX nr result

ID: Angelica23_contig00012380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012380
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arab...   221   2e-55
ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-a...   221   3e-55
dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]                220   6e-55
ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-a...   220   6e-55
ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|2...   220   6e-55

>ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
           lyrata] gi|297311196|gb|EFH41620.1| hypothetical protein
           ARALYDRAFT_494537 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  221 bits (564), Expect = 2e-55
 Identities = 111/158 (70%), Positives = 122/158 (77%)
 Frame = +2

Query: 158 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGSKKSDEPREDRRT 337
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLV+GDCEEFRKLPP KGSKK+ E RE+RRT
Sbjct: 10  LQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKTKEDREERRT 69

Query: 338 LGLVLLRGEEVISMTVEGPPPPDESXXXXXXXXNLSXXXXXXXXXXXXXTAPMVQAQPGL 517
           LGLVLLRGEEVISMTVEGPPPP+ES         ++             T P+VQAQPGL
Sbjct: 70  LGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTGPLVQAQPGL 129

Query: 518 AGPVRGIGGPAPGMMQPQISRPAMLNTPMQYSQQAPPP 631
           +GPVRGIGGPAPGMMQPQISRP  +  P    Q  PPP
Sbjct: 130 SGPVRGIGGPAPGMMQPQISRPPQIIRPP--GQMPPPP 165


>ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Glycine max]
          Length = 282

 Score =  221 bits (563), Expect = 3e-55
 Identities = 114/162 (70%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
 Frame = +2

Query: 158 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGSKKSD-EPREDRR 334
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPP KG K ++   REDRR
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEGADREDRR 69

Query: 335 TLGLVLLRGEEVISMTVEGPPPPDESXXXXXXXXNLSXXXXXXXXXXXXXTAPMVQAQPG 514
           TLGLVLLRGEEVISMTVEGPPPP+ES         L+              AP+VQAQPG
Sbjct: 70  TLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPAPVVQAQPG 129

Query: 515 LAGPVRGIGGPAPGMMQPQISRPAMLNTPMQYSQQAPPPVIR 640
           LAGPVRG+GGPAPGMMQPQISRP  LN P        PPV+R
Sbjct: 130 LAGPVRGVGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMR 171


>dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]
          Length = 254

 Score =  220 bits (560), Expect = 6e-55
 Identities = 108/157 (68%), Positives = 122/157 (77%)
 Frame = +2

Query: 158 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGSKKSDEPREDRRT 337
           LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLV+GDCEEFRKLPP KG+KK++E RE+RRT
Sbjct: 10  LQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKTNEEREERRT 69

Query: 338 LGLVLLRGEEVISMTVEGPPPPDESXXXXXXXXNLSXXXXXXXXXXXXXTAPMVQAQPGL 517
           LGLVLLRGEEVISMTVEGPPPP+ES         ++             T P+VQAQPGL
Sbjct: 70  LGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTGPLVQAQPGL 129

Query: 518 AGPVRGIGGPAPGMMQPQISRPAMLNTPMQYSQQAPP 628
           +GPVRGIGGPAPGMMQPQISRP ++  P       PP
Sbjct: 130 SGPVRGIGGPAPGMMQPQISRPPLIIRPPGQMPPQPP 166


>ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Glycine max]
          Length = 281

 Score =  220 bits (560), Expect = 6e-55
 Identities = 114/162 (70%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
 Frame = +2

Query: 158 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGSKKSD-EPREDRR 334
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPP KG K ++   REDRR
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEGGDREDRR 69

Query: 335 TLGLVLLRGEEVISMTVEGPPPPDESXXXXXXXXNLSXXXXXXXXXXXXXTAPMVQAQPG 514
           TLGLVLLRGEEVISMTVEGPPPP+ES         L+              AP+VQAQPG
Sbjct: 70  TLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPAPVVQAQPG 129

Query: 515 LAGPVRGIGGPAPGMMQPQISRPAMLNTPMQYSQQAPPPVIR 640
           LAGPVRG+GGPAPGMMQPQISRP  LN P        PPV+R
Sbjct: 130 LAGPVRGMGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMR 171


>ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|222860750|gb|EEE98297.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  220 bits (560), Expect = 6e-55
 Identities = 110/151 (72%), Positives = 121/151 (80%)
 Frame = +2

Query: 158 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPLKGSKKSDEPREDRRT 337
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPP KG KK++E REDRRT
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKNNEEREDRRT 68

Query: 338 LGLVLLRGEEVISMTVEGPPPPDESXXXXXXXXNLSXXXXXXXXXXXXXTAPMVQAQPGL 517
           LGLVLLRGEEVISMTVEGPPPP+ES         ++             TAP+VQAQPGL
Sbjct: 69  LGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAPLVQAQPGL 128

Query: 518 AGPVRGIGGPAPGMMQPQISRPAMLNTPMQY 610
           AGPVRG+GGP+PGMMQPQ+SRP +   PM Y
Sbjct: 129 AGPVRGVGGPSPGMMQPQLSRPQLSAPPMTY 159


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