BLASTX nr result

ID: Angelica23_contig00012347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012347
         (1349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|2...   367   5e-99
ref|XP_002326937.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99
ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-lik...   360   4e-97
ref|XP_002510224.1| protein translocase, putative [Ricinus commu...   355   2e-95
ref|XP_004141252.1| PREDICTED: protein TIC 22, chloroplastic-lik...   333   6e-89

>ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|222844164|gb|EEE81711.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  367 bits (941), Expect = 5e-99
 Identities = 192/274 (70%), Positives = 218/274 (79%), Gaps = 4/274 (1%)
 Frame = -3

Query: 1239 PPNAITRLSTFLHHHCHRLSADVAARLDDSRRLIXXXXXXXXXXXXXXPINSALGLPFAS 1060
            P N +  LSTF+HHHC RL A+ + R+ D+ R +                  A   PFAS
Sbjct: 6    PSNPLLSLSTFIHHHCLRLGAEFSTRISDTTRFLGGNLPPPRRLCL------APSPPFAS 59

Query: 1059 VSQAKQEAQ----SVDYVAKRLVGTAVYTVSNSSNEFVLLSDPDGVKSIGLLCFRKEDAE 892
            VSQ KQ A     S D+VAK L GTAVYTVSNS+NEFVL+SDP+G KSIGLLCFR+EDAE
Sbjct: 60   VSQPKQTATTANLSSDHVAKTLAGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRQEDAE 119

Query: 891  AFLSQVRLRKGGGIKGHAKVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALELKASDVRS 712
            AFL+QVRLR+   ++  AKVVPITLDQVYMLKVEGIAFRF+PDPVQIKNALELKA D+RS
Sbjct: 120  AFLAQVRLRRRE-LRSQAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKAVDIRS 178

Query: 711  GFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEQELSTVSRSARGPGMSQQIMVGSLEDV 532
            GFDGVPVFQSDLLVVKKKNKRYCPIYF+KEDIE+ELS VS+++RGP +SQ IMVGSLEDV
Sbjct: 179  GFDGVPVFQSDLLVVKKKNKRYCPIYFQKEDIEKELSKVSKASRGPSLSQHIMVGSLEDV 238

Query: 531  LKKMEINEKNSGWEDLIFIPPGKSRSQHIQEVAK 430
            LKKMEI+EK SGWEDLIFIPPGKS SQHI E+ K
Sbjct: 239  LKKMEISEKKSGWEDLIFIPPGKSHSQHIHEITK 272


>ref|XP_002326937.1| predicted protein [Populus trichocarpa] gi|222835252|gb|EEE73687.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  366 bits (940), Expect = 6e-99
 Identities = 191/275 (69%), Positives = 221/275 (80%), Gaps = 4/275 (1%)
 Frame = -3

Query: 1239 PPNAITRLSTFLHHHCHRLSADVAARLDDSRRLIXXXXXXXXXXXXXXPINSALGLPFAS 1060
            P N +  LST +H HC RL A+ +AR+ D+ R +               +  A   PFAS
Sbjct: 6    PSNPLLSLSTVIHQHCLRLGAEFSARVSDTTRFLAGNFPPPSR------LRLAPSPPFAS 59

Query: 1059 VSQAKQEAQ----SVDYVAKRLVGTAVYTVSNSSNEFVLLSDPDGVKSIGLLCFRKEDAE 892
            VSQ KQ A     S ++VAK L GTAVYTVSNS NEFVL+SDP+G KSIGLLCFR+EDAE
Sbjct: 60   VSQPKQTANTANLSSEHVAKALAGTAVYTVSNSDNEFVLISDPNGAKSIGLLCFRQEDAE 119

Query: 891  AFLSQVRLRKGGGIKGHAKVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALELKASDVRS 712
            AFL+QVRLR+   ++  AKVVPITLDQVYMLKVEGIAFRF+PDPVQIKNALELK++DVRS
Sbjct: 120  AFLAQVRLRRRE-LRSQAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKSADVRS 178

Query: 711  GFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEQELSTVSRSARGPGMSQQIMVGSLEDV 532
            GFDGVPVFQSD L+VKKK+KRYCP+YF+KEDIE+ELS VSR++RGPG+SQ IMVGSLEDV
Sbjct: 179  GFDGVPVFQSDQLIVKKKSKRYCPVYFQKEDIEKELSKVSRASRGPGLSQHIMVGSLEDV 238

Query: 531  LKKMEINEKNSGWEDLIFIPPGKSRSQHIQEVAKA 427
            LKKMEI+EKNSGWEDLIFIPPGKS SQHIQE+ KA
Sbjct: 239  LKKMEISEKNSGWEDLIFIPPGKSHSQHIQEITKA 273


>ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-like isoform 1 [Vitis
            vinifera] gi|359492043|ref|XP_003634356.1| PREDICTED:
            protein TIC 22, chloroplastic-like isoform 2 [Vitis
            vinifera]
          Length = 277

 Score =  360 bits (925), Expect = 4e-97
 Identities = 190/277 (68%), Positives = 223/277 (80%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1239 PPNAITRLSTFLHHHCHRLSADVAARLDDSRRLIXXXXXXXXXXXXXXPINSALGLPFAS 1060
            P N +   STF+H HC RL A++A+RLDD+RRL                      LPFAS
Sbjct: 6    PSNPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNWPPPALRRSLPLS-----SLPFAS 60

Query: 1059 VSQ----AKQE---AQSVDYVAKRLVGTAVYTVSNSSNEFVLLSDPDGVKSIGLLCFRKE 901
            +SQ    AK++   A S D+VAK L GTAVYTVSNS+NEFVL+SDP+G+KSIGLLCFR+E
Sbjct: 61   MSQEARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPNGIKSIGLLCFRQE 120

Query: 900  DAEAFLSQVRLRKGGGIKGHAKVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALELKASD 721
            DAEAFL+QV+ R    ++  A+VVPI+LDQVYMLKVEGIAFRF+PDPVQIKNALELKA+D
Sbjct: 121  DAEAFLAQVQSRTRE-LRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAAD 179

Query: 720  VRSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEQELSTVSRSARGPGMSQQIMVGSL 541
            ++SGFDGVPVFQSDLLVVKKKN+RYCPIYF+KEDI +ELS VSRS+RGPG++Q IMVGSL
Sbjct: 180  IKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSL 239

Query: 540  EDVLKKMEINEKNSGWEDLIFIPPGKSRSQHIQEVAK 430
            EDVL+KME +EKNSGWEDLIFIPPGKS SQHIQEV K
Sbjct: 240  EDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQEVTK 276


>ref|XP_002510224.1| protein translocase, putative [Ricinus communis]
            gi|223550925|gb|EEF52411.1| protein translocase, putative
            [Ricinus communis]
          Length = 272

 Score =  355 bits (910), Expect = 2e-95
 Identities = 186/273 (68%), Positives = 220/273 (80%), Gaps = 5/273 (1%)
 Frame = -3

Query: 1233 NAITRLSTFLHHHCHRLSADVAARLDDSRRLIXXXXXXXXXXXXXXPINSALGLP---FA 1063
            N +  LSTF+H HC RL A+++ RL D+   +               +N+    P   FA
Sbjct: 8    NPLLSLSTFIHQHCLRLGAELSTRLGDTTWAVSNNLLPG--------LNNRKHRPAPLFA 59

Query: 1062 SVSQAKQEAQ--SVDYVAKRLVGTAVYTVSNSSNEFVLLSDPDGVKSIGLLCFRKEDAEA 889
            SVSQ  ++A   S ++VAK L GTAVYTVSNS+NEFVL+SDPDG KSI LLCFR+EDAEA
Sbjct: 60   SVSQQPKQASGLSSEHVAKTLAGTAVYTVSNSNNEFVLVSDPDGAKSISLLCFRQEDAEA 119

Query: 888  FLSQVRLRKGGGIKGHAKVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALELKASDVRSG 709
            FL+QVRLR+   ++  A++VPITLDQVYMLKVEGIAFRF+PDPVQIKNALELKASD + G
Sbjct: 120  FLAQVRLRRRE-LRSQARIVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTKRG 178

Query: 708  FDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEQELSTVSRSARGPGMSQQIMVGSLEDVL 529
            FDGVP+FQS+LLVVKKKNKRYCPIYF+KEDIE+ELS VSR++RGPG+SQ IMVGSLEDVL
Sbjct: 179  FDGVPIFQSELLVVKKKNKRYCPIYFQKEDIEKELSKVSRASRGPGLSQHIMVGSLEDVL 238

Query: 528  KKMEINEKNSGWEDLIFIPPGKSRSQHIQEVAK 430
            +KME++EKNSGWEDLIFIPPGKS SQHIQEVAK
Sbjct: 239  RKMEMSEKNSGWEDLIFIPPGKSHSQHIQEVAK 271


>ref|XP_004141252.1| PREDICTED: protein TIC 22, chloroplastic-like [Cucumis sativus]
          Length = 277

 Score =  333 bits (854), Expect = 6e-89
 Identities = 175/272 (64%), Positives = 204/272 (75%)
 Frame = -3

Query: 1242 PPPNAITRLSTFLHHHCHRLSADVAARLDDSRRLIXXXXXXXXXXXXXXPINSALGLPFA 1063
            P  N +  +S+F+HHHC +L A+++ RL+D++R                   +      A
Sbjct: 8    PHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPTPAFASLA 67

Query: 1062 SVSQAKQEAQSVDYVAKRLVGTAVYTVSNSSNEFVLLSDPDGVKSIGLLCFRKEDAEAFL 883
              + A     S D VAK LVGTAVYTVSNS+NEFVL+SDP+G KSIGLLCFRKEDAE FL
Sbjct: 68   RHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFL 127

Query: 882  SQVRLRKGGGIKGHAKVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALELKASDVRSGFD 703
            +QVR RK   ++ +AKVVPITLDQVY+LKVEGIAFRF+PDP+Q+KNALELKAS+  S FD
Sbjct: 128  AQVRSRKRE-LRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFD 186

Query: 702  GVPVFQSDLLVVKKKNKRYCPIYFRKEDIEQELSTVSRSARGPGMSQQIMVGSLEDVLKK 523
            GVPVFQSDLL+VKKKNKRYCPIYF KEDIE+EL  V + AR  G SQ IMVGSLEDVLKK
Sbjct: 187  GVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPK-ARRFGTSQHIMVGSLEDVLKK 245

Query: 522  MEINEKNSGWEDLIFIPPGKSRSQHIQEVAKA 427
            ME+NE NS WEDLIFIPPGKS SQH QEV KA
Sbjct: 246  MELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 277


Top