BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012309
         (1795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...   457   e-126
emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...   456   e-126
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni...   436   e-119
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...   430   e-118
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni...   429   e-118

>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
            gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
            protein Virp1a [Solanum lycopersicum]
            gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
            protein Virp1b [Solanum lycopersicum]
            gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
            protein Virp1c [Solanum lycopersicum]
            gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
            protein Virp1d [Solanum lycopersicum]
            gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
            gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score =  457 bits (1175), Expect = e-126
 Identities = 279/563 (49%), Positives = 340/563 (60%), Gaps = 64/563 (11%)
 Frame = -3

Query: 1694 MASAVFENRNESS-----SSLGKFMGKKFKYXXXXXXXXXXNRKLSKPKRKQFHQL---- 1542
            MASAV  +RNESS      + G FMGK              +    K K+KQFH      
Sbjct: 1    MASAVLASRNESSWAQSGGAGGGFMGKT---PYSHTQLNPNHNPNPKKKQKQFHHTSNGR 57

Query: 1541 ---DVPIVSQDVSEDAYSYNHAKGEG----EGFNRGDYVYFHVSGFSKSXXXXXXXXXXX 1383
               D P V+Q  S+DAYS+N    E     +G N G Y+ F+V  ++K+           
Sbjct: 58   HMDDSPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNKAEVNELRSRLMA 117

Query: 1382 XLQKVRSLNDRIQFGGFS-------GKNKKLSGQKRSFSGGLNAD--------------- 1269
             ++++R+L DRI+ G  S       GK+KK SG KR    G + D               
Sbjct: 118  EVEQIRNLKDRIESGQLSTTNPRSQGKSKKQSGNKRPTPSGSSKDLKKLPNGVENRNFGN 177

Query: 1268 -GG-------DYDDLMKMCKQILTKLMRNRNSRVFNKPVDAVGLGLYDYHHIVKEPMDLG 1113
             GG         + +MK C+QIL KLM+++N  +FN PVDA  LGL+DYH I+K PMDLG
Sbjct: 178  PGGVDGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLG 237

Query: 1112 TVKMNLSKNLYSSPSEFASDVRLTFNNAMLYNPKTDQVHSMAAQLLSQFEDMFGPVQEKL 933
            TVK NL+KN Y SP EFA+DVRLTFNNA+LYNPKTDQV++ A QLL +FEDMF P+Q+K+
Sbjct: 238  TVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPLQDKM 297

Query: 932  DSNVEKDDGVRIGN---DDCGGSSWNEISTPERPKKPKTNLVSSIPTMPERINEPLIQSS 762
            +    K +G R      D+  GSSWN I TPER KKPK   V +I    ER+      SS
Sbjct: 298  N----KLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKPTPVPNISKKQERMQN---HSS 350

Query: 761  ASNRS-----NSDPRSMQSPVLTPSPVQAQPVKPAGSVKGAGTSKQPKPKAKDPNKRAMT 597
            AS  S      + P   QSP+ TPSPV+A   KP  + K     KQPKP+AKDPNKR M 
Sbjct: 351  ASTPSLPVPPPNPPARQQSPLSTPSPVRAPAAKPQSAAKVPTMGKQPKPRAKDPNKREMN 410

Query: 596  MEEKQKLGVGLQNLPEEKMPQLVQIIRKRNERLAQEGDEIELDIEALDTETLWELDRFVT 417
            MEEK KLGVGLQ+LP+EKMPQLVQIIRKRNE LAQ+GDEIELDIEALDTETLWELDRFVT
Sbjct: 411  MEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVT 470

Query: 416  NWKKLASKTKRQALMDNF---------STAPMVAPDTDEVLASDINDGAEKIKKGD-GNE 267
            NWKK+ SKTKRQALM+N          S A     + D    S+ ND  +K KKGD G E
Sbjct: 471  NWKKMVSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKAKKGDVGEE 530

Query: 266  DVDIGDEMPESSFLPVEIEKDDG 198
            DV+I D+ P + F PVEIEKD+G
Sbjct: 531  DVEIEDDEPATHFPPVEIEKDEG 553


>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score =  456 bits (1174), Expect = e-126
 Identities = 280/565 (49%), Positives = 340/565 (60%), Gaps = 66/565 (11%)
 Frame = -3

Query: 1694 MASAVFENRNESS-----SSLGKFMGKK-FKYXXXXXXXXXXNRKLSKPKRKQFHQL--- 1542
            MASAV  +RNESS      + G FMGK  F +           +K    K+KQFH     
Sbjct: 1    MASAVLASRNESSWAQSGGAGGGFMGKTPFSHTQLNPNHNPNPKK----KQKQFHHTSNG 56

Query: 1541 ----DVPIVSQDVSEDAYSYNHAKGEG----EGFNRGDYVYFHVSGFSKSXXXXXXXXXX 1386
                + P V+Q  S+DAYS+N    E     +G N G Y+ F+V  ++K           
Sbjct: 57   RHIDESPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNKGEVNELRSRLL 116

Query: 1385 XXLQKVRSLNDRIQFGGFS-------GKNKKLSGQKRSFSGGLNAD-------------- 1269
              ++++R+L DRI+ G  S       GK+KKLSG KR    G + D              
Sbjct: 117  AEVEQIRNLKDRIESGQLSTTNPRSQGKSKKLSGNKRPTPSGSSKDPKKLPNGVENRNFG 176

Query: 1268 ----GGDY-----DDLMKMCKQILTKLMRNRNSRVFNKPVDAVGLGLYDYHHIVKEPMDL 1116
                GG       + +MK C+QIL KLM+++N  +FN PVDA  LGL+DYH I+K P+DL
Sbjct: 177  NPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPIDL 236

Query: 1115 GTVKMNLSKNLYSSPSEFASDVRLTFNNAMLYNPKTDQVHSMAAQLLSQFEDMFGPVQEK 936
            GTVK NL+KN Y SP EFA+DVRLTFNNA+LYNPKTDQV+  A QLL +FEDMF P+Q+K
Sbjct: 237  GTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQDK 296

Query: 935  LDSNVEKDDGVRIGN---DDCGGSSWNEISTPERPKKPKTNLVSSIPTMPERINEPLIQS 765
            ++    K +G R      D+  GSSWN I TPER KKPK   V  I    ER+      S
Sbjct: 297  MN----KLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKATPVPHISKKQERMQN---HS 349

Query: 764  SASNRS-----NSDPRSMQSPVLTPSPVQAQPVKPAGSVKGAGTSKQPKPKAKDPNKRAM 600
            SAS  S      + P   QSP+ TPSPV+A P KP  + K     KQPKP+AKDPNKR M
Sbjct: 350  SASTPSLPVPPPNPPARQQSPLSTPSPVRAPPSKPESAAKVPAMGKQPKPRAKDPNKRVM 409

Query: 599  TMEEKQKLGVGLQNLPEEKMPQLVQIIRKRNERLAQEGDEIELDIEALDTETLWELDRFV 420
             MEEK KLGVGLQ+LP+EKMPQLVQIIRKRNE LAQ+GDEIELDIEALDTETLWELDRFV
Sbjct: 410  NMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFV 469

Query: 419  TNWKKLASKTKRQALMDN----------FSTAPMVAPDTDEVLASDINDGAEKIKKGD-G 273
            TNWKK+ SKTKRQALM N           S A     + D    S+ ND  +K KKGD G
Sbjct: 470  TNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKPKKGDVG 529

Query: 272  NEDVDIGDEMPESSFLPVEIEKDDG 198
             EDV+I D+ P + F PVEIEKD+G
Sbjct: 530  EEDVEIEDDEPATHFPPVEIEKDEG 554


>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana benthamiana]
          Length = 613

 Score =  436 bits (1120), Expect = e-119
 Identities = 273/571 (47%), Positives = 341/571 (59%), Gaps = 72/571 (12%)
 Frame = -3

Query: 1694 MASAVFENRNESS-----SSLGKFMGKKFKYXXXXXXXXXXNRKLSKPKRKQFHQL---- 1542
            MASAV  +RNESS      + G FMGK              +    K K+KQFH      
Sbjct: 1    MASAVLASRNESSWAQSGGAGGGFMGKT---PYSHTHLNPNSNPNPKKKQKQFHHASNGC 57

Query: 1541 ---DVPIVSQDVSEDAYSYNHAKGEG----EGFNRGDYVYFHVSGFSKSXXXXXXXXXXX 1383
               ++P V+Q  S+DAYS+N    E     +G N G Y+ ++V+ +SK+           
Sbjct: 58   HNDELPAVTQTASDDAYSFNQRPIESSANVDGLNLGGYMTYNVASYSKTELHDLRSRLVA 117

Query: 1382 XLQKVRSLNDRIQFGGFS-------GKNKKLSGQKRSFSGGLNAD--------------- 1269
             L+++R+L DRI+ G  S       GK+KKLSG KR    G + D               
Sbjct: 118  ELEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRPTPSGSSKDPKKLPNGVDNRNFGN 177

Query: 1268 ---GG-----DYDDLMKMCKQILTKLMRNRNSRVFNKPVDAVGLGLYDYHHIVKEPMDLG 1113
               GG       +++MK C+Q+L KLM++++  +FN PVDA  LGL+DY  I+K PMDLG
Sbjct: 178  PGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLG 237

Query: 1112 TVKMNLSKNLYSSPSEFASDVRLTFNNAMLYNPKTDQVHSMAAQLLSQFEDMFGPVQEKL 933
            TVK NLS NLY +P EFA+DVRLTFNNA+LYNPKTDQVH  A  LL++FEDMF P Q+KL
Sbjct: 238  TVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPFQDKL 297

Query: 932  DSNVEKDDGVRIGN--DDCGGSSWNEISTPERPKKPKTNLVSSIPTMPERINEPLIQSSA 759
            +  ++   G R  +  D+  GSSWN I TPER KKPK      I    ER+ +    SSA
Sbjct: 298  NK-LDGGSGRRDFHAIDELQGSSWNHIPTPERVKKPKPTPAPHISKKQERMMQN--HSSA 354

Query: 758  SNRS--------NSDPRSMQSPVLTPSPVQAQPV-KPAGSV--KGAGTSKQPKPKAKDPN 612
            S  S        N      QSP+ TPSPV+A P  KP  SV  K     KQPKP+AKDPN
Sbjct: 355  STPSLPVQQPPDNPPVVQQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMEKQPKPRAKDPN 414

Query: 611  KRAMTMEEKQKLGVGLQNLPEEKMPQLVQIIRKRNERLAQEGDEIELDIEALDTETLWEL 432
            KR M+MEEK KLGVGLQ+LP+EKMPQLVQIIRKRNE LAQ+GDEIELDIEALDTETLWEL
Sbjct: 415  KREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWEL 474

Query: 431  DRFVTNWKKLASKTKRQALMDNFSTAPMVA----------PDTDEVLASDINDGAEKIKK 282
            DRFVTNWKK+ SKTKRQAL++N    P  +           + D    S+ ND  +K KK
Sbjct: 475  DRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTSVAEADGPSTSEKNDSFKKPKK 534

Query: 281  G---DGNEDVDIGDEMPESSFLPVEIEKDDG 198
            G      +DV+I D+ P + F PVEI+KD+G
Sbjct: 535  GGDAGDEDDVEIEDDEPATQFPPVEIDKDEG 565


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score =  430 bits (1106), Expect = e-118
 Identities = 272/576 (47%), Positives = 338/576 (58%), Gaps = 77/576 (13%)
 Frame = -3

Query: 1694 MASAVFENRNESS-----SSLGKFMGKKFKYXXXXXXXXXXNRKLSKPKRKQFHQL---- 1542
            MA AV  +RNESS      + G FMGK              +    K K+KQFH      
Sbjct: 1    MAFAVLASRNESSWAQSGGAGGGFMGKT---PYSHTHLNPNSNPNPKKKQKQFHHASNGR 57

Query: 1541 ---DVPIVSQDVSEDAYSYNHAKGEG----EGFNRGDYVYFHVSGFSKSXXXXXXXXXXX 1383
               + P V+Q  S+DAYS+N    E     +G N G Y+ ++V+ ++K+           
Sbjct: 58   HNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTYNVASYNKTELHELRSRLVA 117

Query: 1382 XLQKVRSLNDRIQFGGFS-------GKNKKLSGQKRSFSGGLNAD--------------- 1269
             L+++R+L DRI+ G  S       GK+KKLSG KR    G + D               
Sbjct: 118  ELEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRPTPSGSSKDRKKLLNGVDNRNFGN 177

Query: 1268 ----GG-----DYDDLMKMCKQILTKLMRNRNSRVFNKPVDAVGLGLYDYHHIVKEPMDL 1116
                GG       +++MK C+Q+L KLM++++  +FN PVDA  +GL+DYH I+K PMDL
Sbjct: 178  PGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDL 237

Query: 1115 GTVKMNLSKNLYSSPSEFASDVRLTFNNAMLYNPKTDQVHSMAAQLLSQFEDMFGPVQEK 936
            GTVK NL  N Y +P EFA+DVRLTFNNA+LYNPKTDQVH  A QLL++FEDMF P+Q+K
Sbjct: 238  GTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDK 297

Query: 935  L---DSNVEKDDGVRIGNDDCGGSSWNEISTPERPKKPKTNLVSSIPTMPERINEPLIQS 765
            L   D    + D   I  D+  GSSWN I TPER KKPK      I    ER+ +    S
Sbjct: 298  LNKLDGGTGRRDFRAI--DELQGSSWNHIPTPERVKKPKPTPAPHISKKQERMMQN--HS 353

Query: 764  SASNRS--------NSDPRSMQSPVLTPSPVQAQPV-KPAGSV--KGAGTSKQPKPKAKD 618
            SAS  S        N      QSP+ TPSPV+A P  KP  SV  K     KQPKP+AKD
Sbjct: 354  SASTPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKD 413

Query: 617  PNKRAMTMEEKQKLGVGLQNLPEEKMPQLVQIIRKRNERLAQEGDEIELDIEALDTETLW 438
            PNKR M+MEEK KLGVGLQ+LP+EKMPQLVQIIRKRNE LAQ+GDEIELDIEALDTETLW
Sbjct: 414  PNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLW 473

Query: 437  ELDRFVTNWKKLASKTKRQALMDNFSTAPMVA-----------PDTDEVLASDINDGAEK 291
            ELDRFVTNWKK+ SKTKRQAL++N    P  +            + D    S+ ND  +K
Sbjct: 474  ELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADGPSTSEKNDSFKK 533

Query: 290  IKKG---DGNEDVDIGDEMPESSFLPVEIE--KDDG 198
             KKG      +DV+I D+ P + F PVEIE  KD+G
Sbjct: 534  PKKGGDAGDEDDVEIEDDEPATHFPPVEIEIDKDEG 569


>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 615

 Score =  429 bits (1104), Expect = e-118
 Identities = 267/569 (46%), Positives = 335/569 (58%), Gaps = 70/569 (12%)
 Frame = -3

Query: 1694 MASAVFENRNESS-----SSLGKFMGKKFKYXXXXXXXXXXNRKLSKPKRKQFHQL---- 1542
            MASAV  +RNESS      + G FMGK              +    K K+KQFH      
Sbjct: 1    MASAVLASRNESSWAQSGGAGGGFMGKT---PYSHTHLNPNSNPKPKKKQKQFHHASNGR 57

Query: 1541 ---DVPIVSQDVSEDAYSYNHAKGEG----EGFNRGDYVYFHVSGFSKSXXXXXXXXXXX 1383
               + P V+Q  S+DAYS+N    E     +G N G Y+ ++V+ ++K+           
Sbjct: 58   QNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTYNVASYNKTELHELRSRLVA 117

Query: 1382 XLQKVRSLNDRIQFGGFS-------GKNKKLSGQKRSFSGGLNAD--------------- 1269
             L+++RSL DRI+ G  S       GK+KKLSG KR+   G + D               
Sbjct: 118  ELEQIRSLKDRIESGQLSTSNPRSHGKSKKLSGNKRATPSGSSKDPKKLPNGVDNRNFGN 177

Query: 1268 -GG-------DYDDLMKMCKQILTKLMRNRNSRVFNKPVDAVGLGLYDYHHIVKEPMDLG 1113
             GG         +++MK C+Q+L KLM++++  +FN PVDA  LGL+DYH I+K PMDLG
Sbjct: 178  PGGVGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLG 237

Query: 1112 TVKMNLSKNLYSSPSEFASDVRLTFNNAMLYNPKTDQVHSMAAQLLSQFEDMFGPVQEKL 933
            TVK NLS   Y +P EFA+DVRLTFNNA+LYNPKTDQVH  A QLL++FEDMF P+Q+KL
Sbjct: 238  TVKSNLSNCFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKL 297

Query: 932  ---DSNVEKDDGVRIGNDDCGGSSWNEISTPERPKKPKTNLVSSIPTMPERI----NEPL 774
               D   ++ D      D+  G SWN I TPER KKPK      I    ER+    +  L
Sbjct: 298  NKLDGGSDRRDFHP--TDELQGISWNHIPTPERVKKPKPTPAPHISKKQERMMQNHSSAL 355

Query: 773  IQSSASNRSNSDPRSMQSPVLTPSPVQAQPV-KPAGSV--KGAGTSKQPKPKAKDPNKRA 603
                     N+     QS + TPSPV+A P  KP  SV  K     KQPKP+AKDPNKR 
Sbjct: 356  TLPVQQPPDNTPVVRQQSLLSTPSPVRAPPAPKPQSSVAAKVPPMGKQPKPRAKDPNKRE 415

Query: 602  MTMEEKQKLGVGLQNLPEEKMPQLVQIIRKRNERLAQEGDEIELDIEALDTETLWELDRF 423
            M+MEEK KLGVGLQ+LP+EKMPQLVQIIRKRNE LAQ+GDEIELDIEALDTETLWELDRF
Sbjct: 416  MSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRF 475

Query: 422  VTNWKKLASKTKRQALMDNFSTAPMVA-----------PDTDEVLASDINDGAEKIKKG- 279
            VTNWKK+ SKTKRQAL++N    P  +            + D    S+ ND  +K KKG 
Sbjct: 476  VTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADAPSTSEKNDSFKKPKKGG 535

Query: 278  --DGNEDVDIGDEMPESSFLPVEIEKDDG 198
                 +DV+I D+ P + F PVEI+KD+G
Sbjct: 536  DAGDEDDVEIEDDEPATHFPPVEIDKDEG 564