BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012285
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   719   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   712   0.0  
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   703   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   702   0.0  
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2...   702   0.0  

>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  719 bits (1857), Expect = 0.0
 Identities = 353/425 (83%), Positives = 383/425 (90%), Gaps = 4/425 (0%)
 Frame = -3

Query: 1264 NHDHARRALYQSQKHSHQAIGFSTTNPSIRVDTNTHQLYYPQRPLFRTMLSECLGKAENS 1085
            NHDHARR LYQ+QKHS QAIGF TTNP+IRVDT +HQLYYPQRPLFRT+ S+CLGK  ++
Sbjct: 736  NHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDT 795

Query: 1084 K----MLPKPEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNN 917
            +    ++PKPE YNGQ AIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHIRSYKADV+N
Sbjct: 796  RGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDN 855

Query: 916  KEAPPKKQKIEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSV 737
            KE   K++K +D +NFGKIPSKIGRVDSLD+DGFPFIGANLQ+GDIVIG+ AESG D S+
Sbjct: 856  KELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSI 915

Query: 736  KLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 557
            KLKHTE+GMVQKV+LSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF
Sbjct: 916  KLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 975

Query: 556  PFTRQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXERYATPFSTVSVDAITNQL 377
            PFTRQGIVPDIVINPH+FPSRQTPGQ                +YATPFST+SV+AITNQL
Sbjct: 976  PFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQL 1035

Query: 376  HRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPV 197
            HRAGFSRWGNERVYNGRTGEM+RSL+FMGPT YQRLIHMAEDKVKFRNTGPVHPLTRQPV
Sbjct: 1036 HRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV 1095

Query: 196  ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMG 17
            ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD SQMHIC+KCK+ ANVIQR V G
Sbjct: 1096 ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPG 1155

Query: 16   GRKIR 2
            GRKIR
Sbjct: 1156 GRKIR 1160


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  712 bits (1837), Expect = 0.0
 Identities = 345/425 (81%), Positives = 382/425 (89%), Gaps = 4/425 (0%)
 Frame = -3

Query: 1264 NHDHARRALYQSQKHSHQAIGFSTTNPSIRVDTNTHQLYYPQRPLFRTMLSECLGKAE-- 1091
            NHDHARR LYQS+KHS QA+GF+TTNP+IRVDTNTHQLYYPQRPLFRTM+S+CLGK    
Sbjct: 552  NHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYP 611

Query: 1090 --NSKMLPKPEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNN 917
              ++ ++P+ E++NGQCAIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHIRSYKADV+N
Sbjct: 612  LGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDN 671

Query: 916  KEAPPKKQKIEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSV 737
            KE+  KK K ED++NFGK+ SKIGRVDSLD+DGFPFIGANLQ GDIV+G+ AESG D S+
Sbjct: 672  KESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSI 731

Query: 736  KLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 557
            KLKHTE+GMVQKV+LS+NDEGKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENF
Sbjct: 732  KLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENF 791

Query: 556  PFTRQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXERYATPFSTVSVDAITNQL 377
            PFT QGIVPDIV+NPHAFPSRQTPGQ               ++YATPFST+SVDA+T+QL
Sbjct: 792  PFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQL 851

Query: 376  HRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPV 197
            HRAGFSRWG+ERVYNGRTGEMI SLVFMGPT YQRL HM+EDKVKFRNTGPVHPLTRQPV
Sbjct: 852  HRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPV 911

Query: 196  ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMG 17
            ADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD SQMHICRKC + ANVIQR V G
Sbjct: 912  ADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPG 971

Query: 16   GRKIR 2
            GRKIR
Sbjct: 972  GRKIR 976


>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  703 bits (1814), Expect = 0.0
 Identities = 340/425 (80%), Positives = 376/425 (88%), Gaps = 4/425 (0%)
 Frame = -3

Query: 1264 NHDHARRALYQSQKHSHQAIGFSTTNPSIRVDTNTHQLYYPQRPLFRTMLSECLGKAENS 1085
            NHDHARR LYQS+KHS QAIGFSTTNPSIRVDTN+H LYYPQRP+F TMLS+ LGK++ S
Sbjct: 354  NHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNSHNLYYPQRPIFGTMLSDSLGKSKYS 413

Query: 1084 K----MLPKPEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNN 917
                 MLP PEF+NGQCAIVAVNVHLGYNQEDS+VMNR+S+ERGMFR+EH+RSYKA+V+N
Sbjct: 414  SHHKGMLPHPEFFNGQCAIVAVNVHLGYNQEDSIVMNRASMERGMFRTEHVRSYKAEVDN 473

Query: 916  KEAPPKKQKIEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSV 737
             +AP KK K +D ++FGK  SKIGRVDSLD+DGFPFIGANLQTGDIVIGKHA SGVD S+
Sbjct: 474  SDAPGKKLKPDDLVDFGKTESKIGRVDSLDDDGFPFIGANLQTGDIVIGKHAASGVDHSI 533

Query: 736  KLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 557
            KLKHTE+GMVQKV+LSSND+GKNF VVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF
Sbjct: 534  KLKHTERGMVQKVVLSSNDDGKNFGVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 593

Query: 556  PFTRQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXERYATPFSTVSVDAITNQL 377
            PFT++GIVPDIVINPHAFPSRQTPGQ                +YATPFST SVD IT QL
Sbjct: 594  PFTKEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGALKYATPFSTPSVDDITAQL 653

Query: 376  HRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPV 197
            HR GFSRWG+ERVY+GRTGE + SL+FMGPT YQRL HMAEDK+KFRNTGPVHPLTRQPV
Sbjct: 654  HRLGFSRWGDERVYDGRTGEKVESLIFMGPTFYQRLTHMAEDKIKFRNTGPVHPLTRQPV 713

Query: 196  ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMG 17
            ADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD SQMH+CRKC++ ANVIQR+V G
Sbjct: 714  ADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFG 773

Query: 16   GRKIR 2
            GRKIR
Sbjct: 774  GRKIR 778


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  702 bits (1813), Expect = 0.0
 Identities = 345/425 (81%), Positives = 382/425 (89%), Gaps = 4/425 (0%)
 Frame = -3

Query: 1264 NHDHARRALYQSQKHSHQAIGFSTTNPSIRVDTNTHQLYYPQRPLFRTMLSECLGK---- 1097
            NHDHARRAL+QSQKHS+QAIGFS TN + RVDT +HQL+YPQRPLFRTM ++CLG     
Sbjct: 730  NHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYL 789

Query: 1096 AENSKMLPKPEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNN 917
            + ++ +LPKPEFYNGQ AIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHIRSYKA+V+N
Sbjct: 790  SSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDN 849

Query: 916  KEAPPKKQKIEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSV 737
            KE+  K++K +DAINFGK  SKIGRVDSLD+DGFP+IGANLQ+GDIVIG+ AESG D S+
Sbjct: 850  KESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSI 909

Query: 736  KLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 557
            KLKHTEKGMVQKV+LSSND+GKN+AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF
Sbjct: 910  KLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF 969

Query: 556  PFTRQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXERYATPFSTVSVDAITNQL 377
            PFT QGIVPDIVINPHAFPSRQTPGQ                +YATPFST SVDAIT+QL
Sbjct: 970  PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQL 1029

Query: 376  HRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPV 197
            HRAGFSRWG+ERVYNGRTGEM+RSL+FMGPT YQRLIHMAEDKVKFRNTGPVHPLTRQPV
Sbjct: 1030 HRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV 1089

Query: 196  ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMG 17
            ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD SQMH+C+KCK+ A+VIQR+V G
Sbjct: 1090 ADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAG 1149

Query: 16   GRKIR 2
            GRK+R
Sbjct: 1150 GRKMR 1154


>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
            predicted protein [Populus trichocarpa]
          Length = 1160

 Score =  702 bits (1812), Expect = 0.0
 Identities = 347/421 (82%), Positives = 376/421 (89%)
 Frame = -3

Query: 1264 NHDHARRALYQSQKHSHQAIGFSTTNPSIRVDTNTHQLYYPQRPLFRTMLSECLGKAENS 1085
            NHDHARR LYQ+QKHS QAIGFSTTNP+IRVDT +HQL+YPQRPLFRTM+S+CL      
Sbjct: 704  NHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCL------ 757

Query: 1084 KMLPKPEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNNKEAP 905
             +LPKPE +NGQ AIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHIRSYKA+V+NKE  
Sbjct: 758  -VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELT 816

Query: 904  PKKQKIEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKH 725
             K++K ED+I FGKI SKIGRVDSLD+DGFPFIGAN+Q+GDIVIGK AESG D SVKLKH
Sbjct: 817  DKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKH 876

Query: 724  TEKGMVQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTR 545
            TE+GMVQKV+LSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT 
Sbjct: 877  TERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTI 936

Query: 544  QGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXERYATPFSTVSVDAITNQLHRAG 365
            QG+VPDIVINPHAFPSRQTPGQ               +RYATPFST+SVD I +QLHRA 
Sbjct: 937  QGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAK 996

Query: 364  FSRWGNERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRK 185
            FSRWGNERVYNGRTGEM+RSL+FMGPT YQRL+HMAEDKVKFRNTGPVHPLTRQPVADRK
Sbjct: 997  FSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRK 1056

Query: 184  RFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKI 5
            RFGGIKFGEMERDCLIAHGASANLHERLFTLSD S+MHIC+KCK+ ANVIQR V GGRKI
Sbjct: 1057 RFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKI 1116

Query: 4    R 2
            R
Sbjct: 1117 R 1117