BLASTX nr result

ID: Angelica23_contig00012255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012255
         (3112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34308.1| WD domain containing protein, putative [Solanum d...   520   e-145
ref|XP_002532257.1| WD-repeat protein, putative [Ricinus communi...   504   e-140
ref|XP_002284848.1| PREDICTED: DDB1- and CUL4-associated factor ...   495   e-137
ref|XP_003547044.1| PREDICTED: DDB1- and CUL4-associated factor ...   493   e-136
ref|XP_003542007.1| PREDICTED: DDB1- and CUL4-associated factor ...   483   e-133

>gb|ABI34308.1| WD domain containing protein, putative [Solanum demissum]
          Length = 454

 Score =  520 bits (1340), Expect = e-145
 Identities = 254/368 (69%), Positives = 308/368 (83%), Gaps = 5/368 (1%)
 Frame = +1

Query: 1777 PALQVRLGEVLENGCVETKRIGKHRGRVHNLAVEPGSPHTFYSCAEDGFVHHFDLRSNRA 1956
            PA+ VRLG VLENG VETK++GKH+GRVH LAVEPGSP+  YSC EDGFV H+DLRSN +
Sbjct: 97   PAM-VRLGLVLENGRVETKKVGKHQGRVHKLAVEPGSPYILYSCGEDGFVQHYDLRSNSS 155

Query: 1957 TKLFCCSFLTENNQQSLGNIRLNAIVIDPRNPNFFALGGSDEYARVYDIRRYQLDASSFV 2136
            +KLF CS  TENN+QS G+IRLN IVIDPRNPN+FA+GGSDEYARVYDIR YQLDA +  
Sbjct: 156  SKLFRCSSFTENNKQS-GSIRLNGIVIDPRNPNYFAVGGSDEYARVYDIRMYQLDARTSS 214

Query: 2137 DRPVDTFCPPHLIKSHQVHITALSYSSTSELLISYSDELIYLFNKNMGLGPSPSSVQNED 2316
            DR +DTFCP HLIK+H VHITAL+YS+TSELL+SY+DELIYLF KNMGLGP P S+Q ED
Sbjct: 215  DRSIDTFCPHHLIKTHDVHITALAYSNTSELLVSYNDELIYLFQKNMGLGPVPLSLQGED 274

Query: 2317 LQRLEKPEMYSGHRNSQTIKGVSFFGSNDEYVMSGSDCGRIYIWKKKGAELVRVMIGDRH 2496
            L +LEKP++YSGHRNSQT+KGVSFFG  DEYV++GSDCG I+IWKKK A+LVRVM+GDRH
Sbjct: 275  LNKLEKPQVYSGHRNSQTVKGVSFFGPTDEYVLTGSDCGHIFIWKKKDAKLVRVMVGDRH 334

Query: 2497 IVNQLESHPRIPVIATCGIEKTVKIWAPSSKEFPPLPHDVEEILESNRQSRENNSRVTLS 2676
            IVNQL+ HP IPV+ATCGIEKT+K+WAP+SK+  PLP DV+EI+E+NR+ RE++SRVTL+
Sbjct: 335  IVNQLKPHPCIPVLATCGIEKTIKLWAPTSKDVTPLPPDVQEIMEANRRGREDHSRVTLT 394

Query: 2677 PDVIMHVLRLHRRQALAYIERRYTRADVESDEEDIEA-----LFGFPGGDASSEDGSATG 2841
            PD+IMHVLRLHRRQALAYIERR     V+SD++D +      + GF  G+         G
Sbjct: 395  PDMIMHVLRLHRRQALAYIERRENLGYVDSDDDDDDIGGGAYVLGFSDGE--------EG 446

Query: 2842 DSTDCNIS 2865
            ++++C+IS
Sbjct: 447  ENSECSIS 454


>ref|XP_002532257.1| WD-repeat protein, putative [Ricinus communis]
            gi|223528045|gb|EEF30123.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  504 bits (1299), Expect = e-140
 Identities = 243/361 (67%), Positives = 302/361 (83%), Gaps = 1/361 (0%)
 Frame = +1

Query: 1786 QVRLGEVLENGCVETKRIGKHRGRVHNLAVEPGSPHTFYSCAEDGFVHHFDLRSNRATKL 1965
            QVR+G+VLENG V+TK++GKH+GRV+ LAVEPGSPH  YSC EDGFV HFDLRS  ATKL
Sbjct: 120  QVRVGQVLENGQVDTKKLGKHQGRVYKLAVEPGSPHILYSCGEDGFVQHFDLRSWSATKL 179

Query: 1966 FCCSFLTENNQQSLGNIRLNAIVIDPRNPNFFALGGSDEYARVYDIRRYQLDASSFVDRP 2145
            FCCS  +EN+++    IRLNAIVIDPRNP++FA+GGSDEYARVYDIR+ + DASS  D  
Sbjct: 180  FCCSSFSENSRRPSNWIRLNAIVIDPRNPHYFAVGGSDEYARVYDIRKCRWDASSNSDIA 239

Query: 2146 VDTFCPPHLIKSHQVHITALSYSSTSELLISYSDELIYLFNKNMGLGPSPSSVQNEDLQR 2325
            V+TFCP HLI +  VHIT L+YSSTSELL SY+DELIYLF K+MG+GP P S+ +EDLQ+
Sbjct: 240  VNTFCPRHLIGTKNVHITGLAYSSTSELLASYNDELIYLFQKSMGMGPYPLSISSEDLQK 299

Query: 2326 LEKPEMYSGHRNSQTIKGVSFFGSNDEYVMSGSDCGRIYIWKKKGAELVRVMIGDRHIVN 2505
            LE+P++Y GHRNS+T+KGVSFFG NDEYV+SGSDCG I+IWKK+G +LVR+M GDR +VN
Sbjct: 300  LEEPQVYLGHRNSKTVKGVSFFGPNDEYVLSGSDCGNIFIWKKQGGKLVRLMFGDRQVVN 359

Query: 2506 QLESHPRIPVIATCGIEKTVKIWAPSSKEFPPLPHDVEEILESNRQSRENNSRVTLSPDV 2685
            Q + HP +P+ ATCGIEK+VK+W P + E   +P +VE+I+ESNRQ RE++S+V+L+PDV
Sbjct: 360  QFDPHPHMPMFATCGIEKSVKLWIPMASEDSSIPDNVEKIMESNRQGREDHSQVSLTPDV 419

Query: 2686 IMHVLRLHRRQALAYIERRYTRADVESDEEDIEA-LFGFPGGDASSEDGSATGDSTDCNI 2862
            IMHVLRL RRQ LAYIERRY+R DVESDE++ +A + GF  GDASSE+GS  G+S +CNI
Sbjct: 420  IMHVLRLQRRQTLAYIERRYSRGDVESDEDEGDAYVLGFSAGDASSEEGS-EGNSRECNI 478

Query: 2863 S 2865
            S
Sbjct: 479  S 479


>ref|XP_002284848.1| PREDICTED: DDB1- and CUL4-associated factor 8 [Vitis vinifera]
            gi|297746195|emb|CBI16251.3| unnamed protein product
            [Vitis vinifera]
          Length = 479

 Score =  495 bits (1275), Expect = e-137
 Identities = 242/362 (66%), Positives = 298/362 (82%), Gaps = 2/362 (0%)
 Frame = +1

Query: 1786 QVRLGEVLENGCVETKRIGKHRGRVHNLAVEPGSPHTFYSCAEDGFVHHFDLRSNRATKL 1965
            QVRLG VLENG V+T+R+GKH+GRV+ L +EPGSPH FYSC EDG V HFDLRSN ATKL
Sbjct: 120  QVRLGLVLENGQVDTRRLGKHQGRVYKLDIEPGSPHIFYSCGEDGVVQHFDLRSNSATKL 179

Query: 1966 FCCSFLTENNQQSLGNIRLNAIVIDPRNPNFFALGGSDEYARVYDIRRYQLDASSFVDRP 2145
            F CS  TE N+QS  NI LNAIVIDPRNPN+FA+GGSDEYARVYDIR++Q D+S+ +D P
Sbjct: 180  FYCSSFTELNRQSRNNISLNAIVIDPRNPNYFAVGGSDEYARVYDIRKHQCDSSNNLDGP 239

Query: 2146 VDTFCPPHLIKSHQVHITALSYSSTSELLISYSDELIYLFNKNMGLGPSPSSVQNEDLQR 2325
            V+TFCP HL+ +  V+IT L+YS+TSELL+SY+DELIYLF KNMG+GP+P SV  E+LQ+
Sbjct: 240  VNTFCPHHLVGA-DVYITGLAYSNTSELLVSYNDELIYLFQKNMGMGPTPLSVPPEELQK 298

Query: 2326 LEKPEMYSGHRNSQTIKGVSFFGSNDEYVMSGSDCGRIYIWKKKGAELVRVMIGDRHIVN 2505
            LEKP++Y GHRNSQT+K VSFFG  D+YV+SGSDCG I++WKKKGA+LVR+  GD+ IVN
Sbjct: 299  LEKPQVYLGHRNSQTVKSVSFFGPTDDYVLSGSDCGHIFVWKKKGAKLVRLTAGDQQIVN 358

Query: 2506 QLESHPRIPVIATCGIEKTVKIWAPSSKEFPPLPHDVEEILESNRQSRENNSRVTLSPDV 2685
             LE HP +P+ A+CGIE ++K+W P +    PLP D E+I+ESNRQ RE++S +TL+PDV
Sbjct: 359  HLEPHPYMPIFASCGIENSIKLWIPMADGSLPLPDDAEKIMESNRQGREDHSLITLTPDV 418

Query: 2686 IMHVLRLHRRQALAYIERRYTRADVESDEEDI-EA-LFGFPGGDASSEDGSATGDSTDCN 2859
            IMHVLRL RRQ  AYIERRY RAD+E+DEED  EA L GF  G+ASSE+G  TG++ +CN
Sbjct: 419  IMHVLRLQRRQNAAYIERRYDRADIENDEEDEGEAYLLGFSDGEASSEEG-FTGNTAECN 477

Query: 2860 IS 2865
            IS
Sbjct: 478  IS 479


>ref|XP_003547044.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 488

 Score =  493 bits (1269), Expect = e-136
 Identities = 241/361 (66%), Positives = 291/361 (80%), Gaps = 1/361 (0%)
 Frame = +1

Query: 1786 QVRLGEVLENGCVETKRIGKHRGRVHNLAVEPGSPHTFYSCAEDGFVHHFDLRSNRATKL 1965
            QVRLG + E+G V+T  +GKH G V+ LAVEPGS H FYS  EDGF+ HFDLRSN ATKL
Sbjct: 129  QVRLGLLWEDGRVDTTMLGKHHGCVYKLAVEPGSAHIFYSSGEDGFIQHFDLRSNSATKL 188

Query: 1966 FCCSFLTENNQQSLGNIRLNAIVIDPRNPNFFALGGSDEYARVYDIRRYQLDASSFVDRP 2145
            FCCS    NN+Q+L  + LN+IVIDPRNP +FA+GGSDEYARVYDIR+ Q  ++   DRP
Sbjct: 189  FCCSSSIGNNKQTLSKVGLNSIVIDPRNPYYFAIGGSDEYARVYDIRKCQWGSARNSDRP 248

Query: 2146 VDTFCPPHLIKSHQVHITALSYSSTSELLISYSDELIYLFNKNMGLGPSPSSVQNEDLQR 2325
            V+TFCP HLI S+ VHIT L+YSS SELL+SY+DELIYLF KN+    SPSS  +ED + 
Sbjct: 249  VNTFCPCHLIGSNNVHITGLAYSSFSELLVSYNDELIYLFEKNVHSDSSPSSATSEDPKN 308

Query: 2326 LEKPEMYSGHRNSQTIKGVSFFGSNDEYVMSGSDCGRIYIWKKKGAELVRVMIGDRHIVN 2505
            + + ++YSGHRN+QTIKGV+FFG NDEY+MSGSDCG I+IWKKK A+LVR+M+GD+H+VN
Sbjct: 309  IHEAQVYSGHRNAQTIKGVNFFGPNDEYIMSGSDCGHIFIWKKKEAKLVRLMVGDQHVVN 368

Query: 2506 QLESHPRIPVIATCGIEKTVKIWAPSSKEFPPLPHDVEEILESNRQSRENNSRVTLSPDV 2685
            QLE+HP IP++ATCGIEK VKIWAP   + PPLP +V+EI+E+NRQ RE+ SRVTL+PDV
Sbjct: 369  QLEAHPHIPILATCGIEKNVKIWAPLGNDIPPLPANVKEIMETNRQGREDRSRVTLTPDV 428

Query: 2686 IMHVLRLHRRQALAYIERRYTRADVESDEEDIEA-LFGFPGGDASSEDGSATGDSTDCNI 2862
            IMHVLRL RRQ LAYIERR+ RAD+ SDEED E  L GF  GDASSE+ S  G+S DCNI
Sbjct: 429  IMHVLRLQRRQTLAYIERRHNRADIVSDEEDAEGYLLGFSDGDASSEEDS-PGNSRDCNI 487

Query: 2863 S 2865
            S
Sbjct: 488  S 488


>ref|XP_003542007.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 488

 Score =  483 bits (1244), Expect = e-133
 Identities = 236/361 (65%), Positives = 288/361 (79%), Gaps = 1/361 (0%)
 Frame = +1

Query: 1786 QVRLGEVLENGCVETKRIGKHRGRVHNLAVEPGSPHTFYSCAEDGFVHHFDLRSNRATKL 1965
            Q+RLG + E+G V+T  +GKH G V+ LAVEPGS H FYS  EDGF+ HFDLRSN ATKL
Sbjct: 129  QIRLGLLWEDGRVDTTMLGKHHGCVYKLAVEPGSAHIFYSSGEDGFIQHFDLRSNSATKL 188

Query: 1966 FCCSFLTENNQQSLGNIRLNAIVIDPRNPNFFALGGSDEYARVYDIRRYQLDASSFVDRP 2145
            FCCS    NN+Q+L  + LN+IVID RNP +FA+GGSDEYARVYD+R+ Q D++   DRP
Sbjct: 189  FCCSSSIGNNKQTLSKVGLNSIVIDCRNPYYFAIGGSDEYARVYDMRKCQWDSARNSDRP 248

Query: 2146 VDTFCPPHLIKSHQVHITALSYSSTSELLISYSDELIYLFNKNMGLGPSPSSVQNEDLQR 2325
            V+TFCP HLI S+ VHIT L+YSS  ELL+SY+DELIYLF KNM    SPSS  +ED + 
Sbjct: 249  VNTFCPRHLIGSNNVHITGLAYSSFGELLVSYNDELIYLFEKNMHSDSSPSSATSEDSKN 308

Query: 2326 LEKPEMYSGHRNSQTIKGVSFFGSNDEYVMSGSDCGRIYIWKKKGAELVRVMIGDRHIVN 2505
            + + ++YSGHRN+QTIKGV+FFG NDEYV+SGSDCG I+IWKKK A+LVR+M+GD+H+VN
Sbjct: 309  IHEAQVYSGHRNAQTIKGVNFFGPNDEYVLSGSDCGHIFIWKKKEAKLVRLMVGDQHVVN 368

Query: 2506 QLESHPRIPVIATCGIEKTVKIWAPSSKEFPPLPHDVEEILESNRQSRENNSRVTLSPDV 2685
            Q E+HP IP++ATCGIEK VKIWAP   + PPLP +V+EI+E+NRQ RE+ S+VTL+PDV
Sbjct: 369  QHEAHPHIPILATCGIEKNVKIWAPLGNDIPPLPGNVKEIMETNRQGREDRSQVTLTPDV 428

Query: 2686 IMHVLRLHRRQALAYIERRYTRADVESDEEDIEA-LFGFPGGDASSEDGSATGDSTDCNI 2862
            IMHVLRL RRQ LAYIERR+ RAD+ SDEED E  L GF  GDASSE+    G+S DCNI
Sbjct: 429  IMHVLRLQRRQTLAYIERRHNRADIVSDEEDAEGYLLGFLDGDASSEE-DYPGNSRDCNI 487

Query: 2863 S 2865
            S
Sbjct: 488  S 488


Top