BLASTX nr result
ID: Angelica23_contig00012198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00012198
(2397 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana] 115 7e-23
ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]... 112 6e-22
gb|ABO21639.1| importin alpha-like protein [Brassica napus] gi|1... 111 8e-22
ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arab... 110 2e-21
ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thalia... 109 4e-21
>emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana]
Length = 528
Score = 115 bits (287), Expect = 7e-23
Identities = 92/326 (28%), Positives = 154/326 (47%), Gaps = 12/326 (3%)
Frame = +2
Query: 992 GVYTEEPMNFGMGLKDELSPYVGHMVHVCVERKRRRRDDYIKNMYSDDPDVQMNGTKHLA 1171
G+ ++ + G GL G VE++ ++ +YSDDP Q+ T
Sbjct: 43 GMMLQQQLPLGAGLD-------GPQTAAAVEKRLEGIPMMVQGVYSDDPQAQLEATTQFR 95
Query: 1172 RLLAEDQR--LGDLRSEDV--RFLIGLLKHQENPKLQFDAAFALTNVDSNGGQ----IMK 1327
+LL+ ++ + ++ V RF+ L +H ++P+LQF+AA+ALTNV S +++
Sbjct: 96 KLLSIERSPPIDEVIKAGVIPRFVEFLGRH-DHPQLQFEAAWALTNVASGTSDHTRVVIE 154
Query: 1328 SEAIPLLVDLMISKHRHTRMRGLITLMRITYDFPESIRDLHEIGVLQLLEDVVISDRSDS 1507
A+P+ V L+ S R + + L + D P + G L+ L +++ S
Sbjct: 155 QGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLL-AQLNENSKL 213
Query: 1508 KVLLSCATFLAIVCRGKLYLPTCEIRIALATVKVLLQYGDDKVRRQALSALSYLSHGN-- 1681
+L + L+ CRGK P +++ AL ++ L+ D++V A ALSYLS G
Sbjct: 214 SMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTDACWALSYLSDGPND 273
Query: 1682 --YVAFEGKACKNLLGLISHVDPLIVIPTLQVVGNILAWGNYHQIQFILRKGXXXXXXXX 1855
E C L+ L+ H P ++IP L+ VGNI+ G+ Q QFI+ G
Sbjct: 274 KIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESGVLPHLYNC 332
Query: 1856 XXXXYKIVRYEACRIIQSIDFQKEIQ 1933
K ++ EAC I +I ++Q
Sbjct: 333 DANHKKSIKKEACWTISNITAGNKLQ 358
>ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]
gi|30681049|ref|NP_849623.1| importin alpha isoform 4
[Arabidopsis thaliana] gi|3249096|gb|AAC24079.1| Match to
mRNA for importin alpha-like protein 4 (impa4) gb|Y14616
from A. thaliana. ESTs gb|N96440, gb|N37503, gb|N37498
and gb|T42198 come from this gene [Arabidopsis thaliana]
gi|20259334|gb|AAM13992.1| putative importin alpha
protein [Arabidopsis thaliana] gi|21436201|gb|AAM51388.1|
putative importin alpha protein [Arabidopsis thaliana]
gi|222422859|dbj|BAH19416.1| AT1G09270 [Arabidopsis
thaliana] gi|332190300|gb|AEE28421.1| importin alpha
isoform 4 [Arabidopsis thaliana]
gi|332190301|gb|AEE28422.1| importin alpha isoform 4
[Arabidopsis thaliana]
Length = 538
Score = 112 bits (279), Expect = 6e-22
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 13/327 (3%)
Frame = +2
Query: 992 GVYTEEPMNFGMGLKDELSPYVGHMVHVCVERKRRRRDDYIKNMYSDDPDVQMNGTKHLA 1171
G+ ++ + G GL G VE++ ++ +YSDDP Q+ T
Sbjct: 52 GMMLQQQLPLGAGLD-------GPQTAAAVEKRLEGIPMMVQGVYSDDPQAQLEATTQFR 104
Query: 1172 RLLAEDQR--LGDLRSEDV--RFLIGLLKHQENPKLQFDAAFALTNVDSNGGQ----IMK 1327
+LL+ ++ + ++ V RF+ L +H ++P+LQF+AA+ALTNV S +++
Sbjct: 105 KLLSIERSPPIDEVIKAGVIPRFVEFLGRH-DHPQLQFEAAWALTNVASGTSDHTRVVIE 163
Query: 1328 SEAIPLLVDLMISKHRHTRMRGLITLMRITYDFPESIRDLHEIGVLQLLEDVVISDRSDS 1507
A+P+ V L+ S R + + L + D P + G L+ L +++ S
Sbjct: 164 QGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLL-AQLNENSKL 222
Query: 1508 KVLLSCATFLAIVCRGKLYLPTCEIRIALATVKVLLQYGDDKVRRQALSALSYLSHGN-- 1681
+L + L+ CRGK P +++ AL ++ L+ D++V A ALSYLS G
Sbjct: 223 SMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTDACWALSYLSDGPND 282
Query: 1682 --YVAFEGKACKNLLGLISHVDPLIVIPTLQVVGNILAWGNYHQIQFILRKGXXXXXXXX 1855
E C L+ L+ H P ++IP L+ VGNI+ G+ Q QFI+ G
Sbjct: 283 KIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESGVLPHLYNL 341
Query: 1856 XXXXY-KIVRYEACRIIQSIDFQKEIQ 1933
+ K ++ EAC I +I ++Q
Sbjct: 342 LTQNHKKSIKKEACWTISNITAGNKLQ 368
>gb|ABO21639.1| importin alpha-like protein [Brassica napus]
gi|126572504|gb|ABO21640.1| importin alpha-like protein
[Brassica napus]
Length = 542
Score = 111 bits (278), Expect = 8e-22
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 12/297 (4%)
Frame = +2
Query: 1079 VERKRRRRDDYIKNMYSDDPDVQMNGTKHLARLLAEDQRLGD---LRSEDVRFLIGLLKH 1249
VE++ ++ +YS+DP Q+ T +LL+ ++ +++ + + L+
Sbjct: 76 VEKRLEGIPMMVQGVYSEDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLRR 135
Query: 1250 QENPKLQFDAAFALTNVDSNGGQ----IMKSEAIPLLVDLMISKHRHTRMRGLITLMRIT 1417
Q++P+LQF+AA+ALTNV S +++ A+P+ V+L+ S R + + L +
Sbjct: 136 QDHPQLQFEAAWALTNVASGTSDHTRVVIEHGAVPIFVELLSSASDDVREQAVWALGNVA 195
Query: 1418 YDFPESIRDLHEIGVLQLLEDVVISDRSDSKVLLSCATFLAIVCRGKLYLPTCEIRIALA 1597
D P + G L L +++ S +L + L+ CRGK P E++ AL
Sbjct: 196 GDSPNCRNLVLSCGALAPLLSQ-LNENSKLSMLRNATWTLSNFCRGKPPTPFEEVKPALP 254
Query: 1598 TVKVLLQYGDDKVRRQALSALSYLSHGN----YVAFEGKACKNLLGLISHVDPLIVIPTL 1765
++ L+ D++V A ALSYLS G + C L+ L+SH P ++IP L
Sbjct: 255 VLRQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIQAGVCPRLVELLSHPSPTVLIPAL 314
Query: 1766 QVVGNILAWGNYHQIQFILRKGXXXXXXXXXXXXY-KIVRYEACRIIQSIDFQKEIQ 1933
+ VGNI+ G+ Q QFI+ G + K ++ EAC I +I ++Q
Sbjct: 315 RTVGNIVT-GDDSQTQFIIDSGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKVQ 370
>ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arabidopsis lyrata subsp.
lyrata] gi|297335582|gb|EFH65999.1| hypothetical protein
ARALYDRAFT_888168 [Arabidopsis lyrata subsp. lyrata]
Length = 538
Score = 110 bits (274), Expect = 2e-21
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Frame = +2
Query: 1079 VERKRRRRDDYIKNMYSDDPDVQMNGTKHLARLLAEDQRLGD---LRSEDVRFLIGLLKH 1249
VE++ ++ +YSDDP Q+ T +LL+ ++ +++ V + L
Sbjct: 73 VEKRLEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGR 132
Query: 1250 QENPKLQFDAAFALTNVDSNGGQ----IMKSEAIPLLVDLMISKHRHTRMRGLITLMRIT 1417
Q++P+LQF+AA+ALTNV S +++ A+P+ V L+ S R + + L +
Sbjct: 133 QDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVQLLSSASDDVREQAVWALGNVA 192
Query: 1418 YDFPESIRDLHEIGVLQLLEDVVISDRSDSKVLLSCATFLAIVCRGKLYLPTCEIRIALA 1597
D P + G L+ L +++ S +L + L+ CRGK P +++ AL
Sbjct: 193 GDSPNCRNLVLNYGALEPLL-AQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALP 251
Query: 1598 TVKVLLQYGDDKVRRQALSALSYLSHGN----YVAFEGKACKNLLGLISHVDPLIVIPTL 1765
++ L+ D++V A ALSYLS G + C L+ L+ H P ++IP L
Sbjct: 252 VLRQLIYLNDEEVLTDACWALSYLSDGPNNKIQAVIQAGVCPRLVELLGHQSPTVLIPAL 311
Query: 1766 QVVGNILAWGNYHQIQFILRKGXXXXXXXXXXXXY-KIVRYEACRIIQSIDFQKEIQ 1933
+ VGNI+ G+ Q QFI+ G + K ++ EAC I +I ++Q
Sbjct: 312 RTVGNIVT-GDDSQTQFIIDSGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKVQ 367
>ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thaliana]
gi|332190302|gb|AEE28423.1| importin alpha isoform 4
[Arabidopsis thaliana]
Length = 456
Score = 109 bits (272), Expect = 4e-21
Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)
Frame = +2
Query: 1112 IKNMYSDDPDVQMNGTKHLARLLAEDQR--LGDLRSEDV--RFLIGLLKHQENPKLQFDA 1279
++ +YSDDP Q+ T +LL+ ++ + ++ V RF+ L +H ++P+LQF+A
Sbjct: 3 VQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRH-DHPQLQFEA 61
Query: 1280 AFALTNVDSNGGQ----IMKSEAIPLLVDLMISKHRHTRMRGLITLMRITYDFPESIRDL 1447
A+ALTNV S +++ A+P+ V L+ S R + + L + D P +
Sbjct: 62 AWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLV 121
Query: 1448 HEIGVLQLLEDVVISDRSDSKVLLSCATFLAIVCRGKLYLPTCEIRIALATVKVLLQYGD 1627
G L+ L +++ S +L + L+ CRGK P +++ AL ++ L+ D
Sbjct: 122 LNYGALEPLL-AQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLND 180
Query: 1628 DKVRRQALSALSYLSHGN----YVAFEGKACKNLLGLISHVDPLIVIPTLQVVGNILAWG 1795
++V A ALSYLS G E C L+ L+ H P ++IP L+ VGNI+ G
Sbjct: 181 EEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT-G 239
Query: 1796 NYHQIQFILRKGXXXXXXXXXXXXY-KIVRYEACRIIQSIDFQKEIQ 1933
+ Q QFI+ G + K ++ EAC I +I ++Q
Sbjct: 240 DDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQ 286