BLASTX nr result
ID: Angelica23_contig00012183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00012183
(244 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana] 97 1e-18
gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana] 97 1e-18
ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana] ... 97 1e-18
ref|NP_176447.1| pentatricopeptide repeat-containing protein [Ar... 97 2e-18
gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidop... 97 2e-18
>gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 97.1 bits (240), Expect = 1e-18
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + +D AL+L +EM KG+ PNV+TY+SLI LC++ RW D ++LLS+M++R I+P+V
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 181 YTFSILVDAYGKEGMIKDAE 240
+TFS L+DA+ KEG + +AE
Sbjct: 122 FTFSALIDAFVKEGKLVEAE 141
Score = 62.8 bits (151), Expect = 3e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V++ +++ REM+++G+ N +TYN LIQGL ++ EMV + PN+
Sbjct: 202 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 261
Query: 181 YTFSILVDAYGKEGMIKDA 237
T++ L+D K G ++ A
Sbjct: 262 MTYNTLLDGLCKNGKLEKA 280
Score = 58.2 bits (139), Expect = 7e-07
Identities = 22/75 (29%), Positives = 44/75 (58%)
Frame = +1
Query: 19 DQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNVYTFSIL 198
D A ++ +EM G+ PN++TYN+L+ GLC + + + + + + P +YT++I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302
Query: 199 VDAYGKEGMIKDAED 243
++ K G ++D D
Sbjct: 303 IEGMCKAGKVEDGWD 317
>gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 97.1 bits (240), Expect = 1e-18
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + +D AL+L +EM KG+ PNV+TY+SLI LC++ RW D ++LLS+M++R I+P+V
Sbjct: 881 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940
Query: 181 YTFSILVDAYGKEGMIKDAE 240
+TFS L+DA+ KEG + +AE
Sbjct: 941 FTFSALIDAFVKEGKLVEAE 960
Score = 90.9 bits (224), Expect = 1e-16
Identities = 37/81 (45%), Positives = 60/81 (74%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V+ A D +E+ +KG+ PNV+TY +L+ GLC+ +RW D +LLS+M+K+ I+PNV
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363
Query: 181 YTFSILVDAYGKEGMIKDAED 243
T+S L+DA+ K G + +A++
Sbjct: 364 ITYSALLDAFVKNGKVLEAKE 384
Score = 62.8 bits (151), Expect = 3e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V++ +++ REM+++G+ N +TYN LIQGL ++ EMV + PN+
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080
Query: 181 YTFSILVDAYGKEGMIKDA 237
T++ L+D K G ++ A
Sbjct: 1081 MTYNTLLDGLCKNGKLEKA 1099
Score = 58.2 bits (139), Expect = 7e-07
Identities = 22/75 (29%), Positives = 44/75 (58%)
Frame = +1
Query: 19 DQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNVYTFSIL 198
D A ++ +EM G+ PN++TYN+L+ GLC + + + + + + P +YT++I+
Sbjct: 1062 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 1121
Query: 199 VDAYGKEGMIKDAED 243
++ K G ++D D
Sbjct: 1122 IEGMCKAGKVEDGWD 1136
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V+ + L REM+++G+ N +TYN+LIQG + S+M ISP++
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Query: 181 YTFSILVDAYGKEGMIKDA 237
+T++IL+ G ++ A
Sbjct: 504 WTYNILLGGLCDNGELEKA 522
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
C C V AL +L +M K G P+ +T SL+ G C NR D L+ +MV+ P++
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 181 YTFSILVDAYGKEGMIKDAED 243
++ ++D+ K + DA D
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFD 314
>ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2
[Arabidopsis thaliana]
Length = 630
Score = 97.1 bits (240), Expect = 1e-18
Identities = 42/80 (52%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + +D AL+L +EM KG+ PNV+TY+SLI LC++ RW D ++LLS+M++R I+P+V
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 181 YTFSILVDAYGKEGMIKDAE 240
+TFS L+DA+ KEG + +AE
Sbjct: 327 FTFSALIDAFVKEGKLVEAE 346
Score = 62.8 bits (151), Expect = 3e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V++ +++ REM+++G+ N +TYN LIQGL ++ EMV + PN+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 181 YTFSILVDAYGKEGMIKDA 237
T++ L+D K G ++ A
Sbjct: 467 MTYNTLLDGLCKNGKLEKA 485
Score = 58.2 bits (139), Expect = 7e-07
Identities = 22/75 (29%), Positives = 44/75 (58%)
Frame = +1
Query: 19 DQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNVYTFSIL 198
D A ++ +EM G+ PN++TYN+L+ GLC + + + + + + P +YT++I+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 199 VDAYGKEGMIKDAED 243
++ K G ++D D
Sbjct: 508 IEGMCKAGKVEDGWD 522
>ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62590 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15
[Arabidopsis thaliana] gi|332195860|gb|AEE33981.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 634
Score = 96.7 bits (239), Expect = 2e-18
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK R VD AL+L +EM KG+ PNV+TY+SLI LC + RW D +QLLS+M+++ I+PN+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 181 YTFSILVDAYGKEGMIKDAE 240
TF+ L+DA+ KEG +AE
Sbjct: 331 VTFNALIDAFVKEGKFVEAE 350
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK VD DL ++ KG+ PNV+TYN++I GLC Q+ LL +M + PN
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 181 YTFSILVDAYGKEG 222
T++ L+ A+ ++G
Sbjct: 576 GTYNTLIRAHLRDG 589
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V+ +L REM+ +G+ + +TY +LIQGL + ++ +MV + P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 181 YTFSILVDAYGKEGMIKDA 237
T+SIL+D G ++ A
Sbjct: 471 MTYSILLDGLCNNGKLEKA 489
>gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 96.7 bits (239), Expect = 2e-18
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK R VD AL+L +EM KG+ PNV+TY+SLI LC + RW D +QLLS+M+++ I+PN+
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254
Query: 181 YTFSILVDAYGKEGMIKDAE 240
TF+ L+DA+ KEG +AE
Sbjct: 255 VTFNALIDAFVKEGKFVEAE 274
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK + V+ +L REM+ +G+ + +TY +LIQGL + ++ +MV + P++
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394
Query: 181 YTFSILVDAYGKEGMIKDA 237
T+SIL+D G ++ A
Sbjct: 395 MTYSILLDGLCNNGKLEKA 413
Score = 55.5 bits (132), Expect = 4e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +1
Query: 1 CKCRLVDQALDLLREMTKKGMAPNVITYNSLIQGLCDFNRWQDVNQLLSEMVKRNISPNV 180
CK VD DL ++ KG+ PNV+TYN++I GLC Q+ LL +M + P+
Sbjct: 440 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 499
Query: 181 YTFSILVDAYGKEG 222
T++ L+ A+ ++G
Sbjct: 500 GTYNTLIRAHLRDG 513