BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012156
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   390   e-106
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   390   e-106
ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l...   386   e-105
ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago ...   386   e-105

>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  390 bits (1002), Expect = e-106
 Identities = 197/277 (71%), Positives = 222/277 (80%)
 Frame = +2

Query: 41  MVGLSIGEKHFIEGGIADNIRTDGRGRLIYRPIQIETGVIPQANGSARVKMGGTEVIASV 220
           MVGLS+GE HFI+GGIA ++R DGR RL YRPI +ETGVIPQ NGSARV+MG T+VIASV
Sbjct: 1   MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 221 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXXQICLLGGKSGAGA 400
           KAELG+PS LQPDKGKV I VDCS TA P FEGR             Q CLLGGKSGAGA
Sbjct: 61  KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 401 GIDFSSLSIVGGKICWDLYIDGLVVCXXXXXXXXXXXXIKAALSNTGIPKVNVAAGASSD 580
           GID SSL +V GKICWDLYIDGLVV             IKAALSNTGIP+V VAAG S+D
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 581 EQPEVDISDEEFLQFDTSAVPVIITLTEVRRHYIVDATPEEESHMNSAISMSVNRQGNLC 760
           E PEVD+SDEEFLQFDTS VPVI+TLT+V RHYIVDAT EEES M+SA+S+SVNRQG++C
Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 761 GLTKRGSAGLDPSVLLDMVSVGKHVGEQLMNQLDSEI 871
           G+TKRG  GLDPS++LDM+SV KHV EQL+N+LDSEI
Sbjct: 241 GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEI 277


>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
           gi|296082105|emb|CBI21110.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  390 bits (1002), Expect = e-106
 Identities = 198/277 (71%), Positives = 223/277 (80%)
 Frame = +2

Query: 41  MVGLSIGEKHFIEGGIADNIRTDGRGRLIYRPIQIETGVIPQANGSARVKMGGTEVIASV 220
           MVGLS+GEKHFI+GGIA ++RTDGR RL YRP  +ETGVIPQANGSARV++GGT+VIASV
Sbjct: 1   MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60

Query: 221 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXXQICLLGGKSGAGA 400
           KAELG+PS  QPDKGKV I VDCSPTAAP+FEGR             Q CLLGGKSGAGA
Sbjct: 61  KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120

Query: 401 GIDFSSLSIVGGKICWDLYIDGLVVCXXXXXXXXXXXXIKAALSNTGIPKVNVAAGASSD 580
           GID SSL +V GK+CWDLYIDGLVV             IKAAL+NTGIPKV VA GAS D
Sbjct: 121 GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180

Query: 581 EQPEVDISDEEFLQFDTSAVPVIITLTEVRRHYIVDATPEEESHMNSAISMSVNRQGNLC 760
             PEVDISD+E+LQFDTS VPVI+TLT+V RHYIVDAT EEES M+SA+S+SV+ QG +C
Sbjct: 181 GLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVSGQGRIC 240

Query: 761 GLTKRGSAGLDPSVLLDMVSVGKHVGEQLMNQLDSEI 871
           GL KRG AGLDPSV+LDM+SV KHV EQLMN+LDSEI
Sbjct: 241 GLIKRGGAGLDPSVILDMISVAKHVSEQLMNKLDSEI 277


>ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  389 bits (1000), Expect = e-106
 Identities = 195/277 (70%), Positives = 225/277 (81%)
 Frame = +2

Query: 41  MVGLSIGEKHFIEGGIADNIRTDGRGRLIYRPIQIETGVIPQANGSARVKMGGTEVIASV 220
           MVGLS+GEKHFI+GGI  N+R+DGR R  YRPI IETGVIPQANGSAR+++G TEVIASV
Sbjct: 1   MVGLSLGEKHFIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASV 60

Query: 221 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXXQICLLGGKSGAGA 400
           KAELGRP++LQPDKGKV I VDCSP A P+FEGR             Q CLLGGKSGAGA
Sbjct: 61  KAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLLGGKSGAGA 120

Query: 401 GIDFSSLSIVGGKICWDLYIDGLVVCXXXXXXXXXXXXIKAALSNTGIPKVNVAAGASSD 580
           GID SSL +  GKICWDLYIDGLV+             IKAALSNTGIP+V VAAGAS D
Sbjct: 121 GIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 581 EQPEVDISDEEFLQFDTSAVPVIITLTEVRRHYIVDATPEEESHMNSAISMSVNRQGNLC 760
           EQPEVDISDEEF+QFDTS VPVI+TLT+V RHYIVDAT EEES M+SA+S+S++R+G +C
Sbjct: 181 EQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSISRKGQIC 240

Query: 761 GLTKRGSAGLDPSVLLDMVSVGKHVGEQLMNQLDSEI 871
           GL+KRGSAGLDPSV+ DM+SV +H+ EQL+N+LDSEI
Sbjct: 241 GLSKRGSAGLDPSVISDMISVARHISEQLINKLDSEI 277


>ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  386 bits (992), Expect = e-105
 Identities = 194/277 (70%), Positives = 220/277 (79%)
 Frame = +2

Query: 41  MVGLSIGEKHFIEGGIADNIRTDGRGRLIYRPIQIETGVIPQANGSARVKMGGTEVIASV 220
           MVGLS+GE HFI+GGIA ++R DGR RL YRPI +ETGVIPQ NGSARV+MG T+VIASV
Sbjct: 1   MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 221 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXXQICLLGGKSGAGA 400
           KAELG+PS LQPDKGKV I +DCS TA P FEGR             Q CLLGGKSG GA
Sbjct: 61  KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA 120

Query: 401 GIDFSSLSIVGGKICWDLYIDGLVVCXXXXXXXXXXXXIKAALSNTGIPKVNVAAGASSD 580
           GID SSL +V GKICWDLYIDGLVV             IKAALSNTGIP+V VAAG S+D
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND 180

Query: 581 EQPEVDISDEEFLQFDTSAVPVIITLTEVRRHYIVDATPEEESHMNSAISMSVNRQGNLC 760
           E PEVD+SDEEFLQFDTS VPVI+TLT+V RHYIVDAT EEES M+S +S+SVNRQG++C
Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240

Query: 761 GLTKRGSAGLDPSVLLDMVSVGKHVGEQLMNQLDSEI 871
           G+TKRG  GLDPS++LDM+SV KHV EQL+N+LDSEI
Sbjct: 241 GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEI 277


>ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago truncatula]
           gi|355523454|gb|AET03908.1| Exosome complex exonuclease
           RRP42 [Medicago truncatula]
          Length = 286

 Score =  386 bits (992), Expect = e-105
 Identities = 195/277 (70%), Positives = 224/277 (80%)
 Frame = +2

Query: 41  MVGLSIGEKHFIEGGIADNIRTDGRGRLIYRPIQIETGVIPQANGSARVKMGGTEVIASV 220
           MVGLS+GE+ FIEGGIA ++R DGR RL YRPI +ETGVIPQANGSARV++G TEVIASV
Sbjct: 1   MVGLSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASV 60

Query: 221 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXXQICLLGGKSGAGA 400
           KAELG+PS +QPDKGKV I +DCS TA P FEGR             Q CLLG KSGAGA
Sbjct: 61  KAELGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGA 120

Query: 401 GIDFSSLSIVGGKICWDLYIDGLVVCXXXXXXXXXXXXIKAALSNTGIPKVNVAAGASSD 580
            ID SSL +V GKICWDLYIDGLVV             IK ALSNTGIPKV +AAGASSD
Sbjct: 121 AIDRSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD 180

Query: 581 EQPEVDISDEEFLQFDTSAVPVIITLTEVRRHYIVDATPEEESHMNSAISMSVNRQGNLC 760
           EQPEVD+SDE+F+QFDTS +PVI+TLT+V +HYIVDATPEEES M+SA+S+S+NRQG++C
Sbjct: 181 EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGKHYIVDATPEEESQMSSAVSISINRQGHIC 240

Query: 761 GLTKRGSAGLDPSVLLDMVSVGKHVGEQLMNQLDSEI 871
           G+TKRG AGLDPSV+LDMVSV KHV EQL+N+LDSEI
Sbjct: 241 GVTKRGGAGLDPSVILDMVSVAKHVSEQLINKLDSEI 277