BLASTX nr result

ID: Angelica23_contig00012089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012089
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79657.1|AC025416_31 F5O11.9 [Arabidopsis thaliana]               84   1e-24
ref|XP_003611237.1| CPD photolyase [Medicago truncatula] gi|3555...    86   4e-24
emb|CBI22143.3| unnamed protein product [Vitis vinifera]              104   8e-20
ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   104   8e-20
emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]   103   2e-19

>gb|AAF79657.1|AC025416_31 F5O11.9 [Arabidopsis thaliana]
          Length = 505

 Score = 84.3 bits (207), Expect(3) = 1e-24
 Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = +3

Query: 879  SGLSPYLHFGQITAQRCALEANNARKVHHQILVGHMKAVDSFLEELSVQELSVQRELATN 1058
            SGLSPYLHFGQ++AQRCALEA   R    Q       AVD+FLE     EL V+REL+ N
Sbjct: 270  SGLSPYLHFGQVSAQRCALEARKVRSTSPQ-------AVDTFLE-----ELIVRRELSDN 317

Query: 1059 FCFYHPKYDFYRNGIKVARKTMMDR-TQITENTYTRE 1166
            FC+Y P YD  +   + ARK++MD  +   E+ Y+ E
Sbjct: 318  FCYYQPHYDSLKGAWEWARKSLMDHASDKREHIYSLE 354



 Score = 42.7 bits (99), Expect(3) = 1e-24
 Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +2

Query: 710 KMFCKGAEVPDVGWCEL-EHAVLEVLKGTMIGFLTTRLKSFSS 835
           K+  +GAEVP++ WC   E A +EVL G   GFLT RLK++S+
Sbjct: 216 KVVREGAEVPEIEWCVPGEDAGIEVLMGNKDGFLTKRLKNYST 258



 Score = 34.7 bits (78), Expect(3) = 1e-24
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 823 KLFFTDRNNPLQPKGLSGFLVFLH 894
           K + TDRNNP++PK LSG   +LH
Sbjct: 254 KNYSTDRNNPIKPKALSGLSPYLH 277


>ref|XP_003611237.1| CPD photolyase [Medicago truncatula] gi|355512572|gb|AES94195.1| CPD
            photolyase [Medicago truncatula]
          Length = 517

 Score = 86.3 bits (212), Expect(3) = 4e-24
 Identities = 59/145 (40%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
 Frame = +3

Query: 879  SGLSPYLHFGQITAQRCALEANNARKVHHQILVGHM-----------KAVDSFLEELSVQ 1025
            SGLSPYLHFGQI+AQRCALEA   R  + Q+    +            AVD+FLEEL V+
Sbjct: 272  SGLSPYLHFGQISAQRCALEARKLRASYPQVCFTMLFMLLHFVFPKKVAVDTFLEELIVR 331

Query: 1026 ELSVQRELATNFCFYHPKYDFYRNGIKVARKTMMDR-TQITENTYTREGDCCII*FLHQL 1202
                 RELA NFC+Y P YD  +   + ARKT++D  +   ++ YTRE            
Sbjct: 332  -----RELADNFCYYQPHYDSIQGAWEWARKTLLDHASDKRQHVYTRE------------ 374

Query: 1203 LGIDCLLCCTSPHMRQQLEKAQTAD 1277
                            QLEKA+TAD
Sbjct: 375  ----------------QLEKAKTAD 383



 Score = 43.5 bits (101), Expect(3) = 4e-24
 Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +2

Query: 725 GAEVPDVGWCEL-EHAVLEVLKGTMIGFLTTRLKSFSS 835
           G+EVP+V WCE  E A +EVL G+  GFLT RL+++S+
Sbjct: 223 GSEVPEVDWCEPGEIAAMEVLMGSKNGFLTKRLRNYST 260



 Score = 30.0 bits (66), Expect(3) = 4e-24
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 22/81 (27%)
 Frame = +3

Query: 450 SMLTFTLGLFKRGRSWKEEICKRVSDLI-------------WC*DYK---------GKDM 563
           S+L   +   +  +  K EIC+RVSDL+             W    K         GK  
Sbjct: 123 SLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSARTIRGKIN 182

Query: 564 KLLPLYSIDFPTVGLPNRNCV 626
           K L  Y +DFP V  PN   V
Sbjct: 183 KKLSDYLVDFPDVEPPNTKWV 203


>emb|CBI22143.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  104 bits (259), Expect = 8e-20
 Identities = 95/267 (35%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
 Frame = +3

Query: 450  SMLTFTLGLFKRGRSWKEEICKRVSDLI-------------WC*DYK---------GKDM 563
            S+L       +  + WKEEICKRV   +             W    K         GK  
Sbjct: 116  SLLVTDFSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKIN 175

Query: 564  KLLPLYSIDFPTVGLPNRNCVGPTRSINWVTLFQMGFGRCYFNAFYPVSKCSVKGPKFLM 743
            KLLP Y IDFPT+  P+    G  +SI+W  L           A  P  K    G    +
Sbjct: 176  KLLPEYLIDFPTLQPPSIKWAGTNQSIDWDDLITEVLRE---GAEVPEIKWCESGENAAV 232

Query: 744  WDGVN*NMLFWKY*RVP*LGS*RPD*KAFLHRSQ*PFTTQRTL-----WFSGLSPYLHFG 908
                   +L         +GS       FL +    ++T R         SGLSPYLHFG
Sbjct: 233  ------EIL---------MGSKN----GFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFG 273

Query: 909  QITAQRCALEANNARKVHHQILVGHMKAVDSFLEELSVQELSVQRELATNFCFYHPKYDF 1088
            QI+AQRCALEA   RK   Q       AVD FLE     EL V+RELA NFCFY P+Y+ 
Sbjct: 274  QISAQRCALEAKKNRKNCPQ-------AVDVFLE-----ELIVRRELADNFCFYQPRYNS 321

Query: 1089 YRNGIKVARKTMMDR-TQITENTYTRE 1166
             +   + ARKT+MD  +   E+ YT+E
Sbjct: 322  LQGAWEWARKTLMDHASDKREHIYTKE 348


>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
          Length = 485

 Score =  104 bits (259), Expect = 8e-20
 Identities = 95/267 (35%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
 Frame = +3

Query: 450  SMLTFTLGLFKRGRSWKEEICKRVSDLI-------------WC*DYK---------GKDM 563
            S+L       +  + WKEEICKRV   +             W    K         GK  
Sbjct: 115  SLLVTDFSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKIN 174

Query: 564  KLLPLYSIDFPTVGLPNRNCVGPTRSINWVTLFQMGFGRCYFNAFYPVSKCSVKGPKFLM 743
            KLLP Y IDFPT+  P+    G  +SI+W  L           A  P  K    G    +
Sbjct: 175  KLLPEYLIDFPTLQPPSIKWAGTNQSIDWDDLITEVLRE---GAEVPEIKWCESGENAAV 231

Query: 744  WDGVN*NMLFWKY*RVP*LGS*RPD*KAFLHRSQ*PFTTQRTL-----WFSGLSPYLHFG 908
                   +L         +GS       FL +    ++T R         SGLSPYLHFG
Sbjct: 232  ------EIL---------MGSKN----GFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFG 272

Query: 909  QITAQRCALEANNARKVHHQILVGHMKAVDSFLEELSVQELSVQRELATNFCFYHPKYDF 1088
            QI+AQRCALEA   RK   Q       AVD FLE     EL V+RELA NFCFY P+Y+ 
Sbjct: 273  QISAQRCALEAKKNRKNCPQ-------AVDVFLE-----ELIVRRELADNFCFYQPRYNS 320

Query: 1089 YRNGIKVARKTMMDR-TQITENTYTRE 1166
             +   + ARKT+MD  +   E+ YT+E
Sbjct: 321  LQGAWEWARKTLMDHASDKREHIYTKE 347


>emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]
          Length = 514

 Score =  103 bits (256), Expect = 2e-19
 Identities = 94/267 (35%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
 Frame = +3

Query: 450  SMLTFTLGLFKRGRSWKEEICKRVSDLI-------------WC*DYK---------GKDM 563
            S+L       +  + WKEEICKRV   +             W    K         GK  
Sbjct: 132  SLLVTDFSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKIN 191

Query: 564  KLLPLYSIDFPTVGLPNRNCVGPTRSINWVTLFQMGFGRCYFNAFYPVSKCSVKGPKFLM 743
            KLLP Y IDFPT+  P+    G  +SI+W  L           A  P  K    G    +
Sbjct: 192  KLLPEYLIDFPTLQPPSIKWAGTNQSIDWDDLITEVLRE---GAEVPEIKWCESGENAAV 248

Query: 744  WDGVN*NMLFWKY*RVP*LGS*RPD*KAFLHRSQ*PFTTQRTL-----WFSGLSPYLHFG 908
                   +L         +GS       FL +    ++T R         SGLSPYLHFG
Sbjct: 249  ------EIL---------MGSKN----GFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFG 289

Query: 909  QITAQRCALEANNARKVHHQILVGHMKAVDSFLEELSVQELSVQRELATNFCFYHPKYDF 1088
            QI+AQRCALEA   +K   Q       AVD FLE     EL V+RELA NFCFY P+Y+ 
Sbjct: 290  QISAQRCALEAKKIQKNCPQ-------AVDVFLE-----ELIVRRELADNFCFYQPRYNS 337

Query: 1089 YRNGIKVARKTMMDR-TQITENTYTRE 1166
             +   + ARKT+MD  +   E+ YT+E
Sbjct: 338  LQGAWEWARKTLMDHASDKREHIYTKE 364


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