BLASTX nr result

ID: Angelica23_contig00012036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012036
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   287   2e-75
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   287   2e-75
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   284   2e-74
ref|XP_002328175.1| predicted protein [Populus trichocarpa] gi|2...   278   8e-73
ref|XP_002312895.1| predicted protein [Populus trichocarpa] gi|1...   277   2e-72

>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  287 bits (734), Expect = 2e-75
 Identities = 139/167 (83%), Positives = 150/167 (89%), Gaps = 1/167 (0%)
 Frame = -3

Query: 721 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 542
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 541 KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIVKVRADRESKHIKNRMKGNKSAER 362
           KDMTQD+TFEFERKRNRPERYDRN+AENTLKAIKKI KVR DRE++H   RMKG K+ E+
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 361 KRDAKELEQSIHMVKAPSALQKDPSRTLPKVAVKVS-QHSEENRMKE 224
           +  AKELEQSIHMVKAP+ LQ++PS TLPK+ VKVS Q SEEN   E
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAME 167


>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  287 bits (734), Expect = 2e-75
 Identities = 139/167 (83%), Positives = 150/167 (89%), Gaps = 1/167 (0%)
 Frame = -3

Query: 721 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 542
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 541 KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIVKVRADRESKHIKNRMKGNKSAER 362
           KDMTQD+TFEFERKRNRPERYDRN+AENTLKAIKKI KVR DRE++H   RMKG K+ E+
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 176

Query: 361 KRDAKELEQSIHMVKAPSALQKDPSRTLPKVAVKVS-QHSEENRMKE 224
           +  AKELEQSIHMVKAP+ LQ++PS TLPK+ VKVS Q SEEN   E
Sbjct: 177 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAME 223


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  284 bits (726), Expect = 2e-74
 Identities = 137/167 (82%), Positives = 149/167 (89%), Gaps = 1/167 (0%)
 Frame = -3

Query: 721 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 542
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 541 KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIVKVRADRESKHIKNRMKGNKSAER 362
           KDMTQD+TFEFERKRNRPERYDRNLAENTLKAIKKI KVR DRE++H   RMKG K+ E+
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 361 KRDAKELEQSIHMVKAPSALQKDPSRTLPKVAVKVSQ-HSEENRMKE 224
           +  AKELEQ IHMVKAP+ L+K+PS TLPK+ VKVS+  +EEN   E
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPME 167


>ref|XP_002328175.1| predicted protein [Populus trichocarpa] gi|222837690|gb|EEE76055.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  278 bits (712), Expect = 8e-73
 Identities = 135/167 (80%), Positives = 147/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 721 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 542
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 541 KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIVKVRADRESKHIKNRMKGNKSAER 362
           KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKI KVR+DR + HI+ R+K  K  ER
Sbjct: 61  KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRSDRAASHIEKRLKVRKGKER 120

Query: 361 KRDAKELEQSIHMVKAPSALQKDPSRTLPKVAVKVSQ-HSEENRMKE 224
           +   KELEQSIH+VKAP  L++D S TLPK+ V+VSQ  SE+N+  E
Sbjct: 121 REAQKELEQSIHLVKAPQVLRQDQSLTLPKIKVEVSQPKSEKNQAME 167


>ref|XP_002312895.1| predicted protein [Populus trichocarpa] gi|118482826|gb|ABK93329.1|
           unknown [Populus trichocarpa]
           gi|222849303|gb|EEE86850.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  277 bits (709), Expect = 2e-72
 Identities = 134/167 (80%), Positives = 147/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 721 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 542
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 541 KDMTQDTTFEFERKRNRPERYDRNLAENTLKAIKKIVKVRADRESKHIKNRMKGNKSAER 362
           KDMTQD+TFEFERKRNRPERYDRNLAENTLKAIKKI KVR+DR + HI+ R+K  K  ER
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRSDRAANHIEKRLKVRKGKER 120

Query: 361 KRDAKELEQSIHMVKAPSALQKDPSRTLPKVAVKVSQ-HSEENRMKE 224
           +   KELEQSIH+VKAP  L++D S TLPK+ V+VSQ  SE+N+  E
Sbjct: 121 REAQKELEQSIHLVKAPQVLRQDQSLTLPKIKVQVSQPKSEQNQAME 167


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