BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00012011
         (3834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1301   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1254   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1245   0.0  
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...  1239   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1238   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1301 bits (3368), Expect = 0.0
 Identities = 639/835 (76%), Positives = 723/835 (86%), Gaps = 3/835 (0%)
 Frame = -1

Query: 2715 FMLQKLFSLVDQTSAPDNPDALQNQEVLLPGHLITIYLKEKIQEWLLKAAKELRDVINSD 2536
            FM+QKLFSL+DQTS PDNPD LQNQEVLLPGHLITIYLKEK+QEWL KA + L+D IN  
Sbjct: 309  FMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINK- 367

Query: 2535 NKKFELMKINDVKKVMQTSSSKLIGTAIDNMLKTGRLVTRLGIDLPQSAGMTVQADRLNF 2356
             K FE   +  VKKVM  + S+ I  A++NMLKTGRLVT+ G+DL Q AGMTVQA+RLNF
Sbjct: 368  RKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNF 427

Query: 2355 LRFISHFRAVHRGASVAGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITS 2176
            LRF+SHFRAVHRGAS AGLRTTSVRKLLPE+WGF+CPVHTPDGEPCGLLNHM S CRITS
Sbjct: 428  LRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITS 487

Query: 2175 FYDSGRNLKDFFKMRKSILTILIGVGMIPSWPRLVKSGFPELFSVLLDGCVVGTISSNIV 1996
            ++DS  N +DFFK+R SIL++LIG+GM P+ P+LV++G PE+ SV+LDG VVG+I S+ V
Sbjct: 488  YFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEV 547

Query: 1995 EKAVAHLRRLKLSANSMIPDDLEIGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLLPPPTE 1816
            E AV HLRRLK+SA S+IPDDLE+GY+PLS+GG YPGLYLFT PSRFVRP +N+  P  E
Sbjct: 548  ETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEE 607

Query: 1815 SNNIELIGPFEQVYMEIRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSP 1636
             ++IELIGPFEQVYMEIRCPDG DGGR+++ PATHEEIHPTG+LS+VA+LTPWSDHNQSP
Sbjct: 608  GHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSP 667

Query: 1635 RNMYQCQMGKQTMGFASQALKCRADQKLYHLQTPQTPLVRTGTYEKYGIDEFPLGTNAIV 1456
            RNMYQCQMGKQTM F+SQA+ CRADQKLYHLQTPQTP+VRT  Y KY +DEFP GTNAIV
Sbjct: 668  RNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIV 727

Query: 1455 AVLAYSGYDMEDAMVLNKSSVDRGMCHGHIYQTESIDLAEE-KRSDRKNQMFRRDG--KS 1285
            AVLAYSGYDMEDAM+LNKSSVDRG+CHG IYQTE+IDL++E  +SDR  +MFRR    KS
Sbjct: 728  AVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKS 787

Query: 1284 SKSLIDSDGLPHVGQTIRPDEPYCNIYDADTSRTRSQKLKGTEPAIVDYVAVDVKNKKHL 1105
            + SLIDSDGLP+VGQ I P+EPYC+IY+  TS TR+ KLKG+EP IVDYVA+D KNKKH 
Sbjct: 788  ANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHP 847

Query: 1104 QKVNIRFRRQRNPVIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSR 925
            QKVNIRFRR RNP+IGDKFSSRHGQKGVCSQLW DIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 848  QKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 907

Query: 924  MTIAMLLESMAAKGGCLHGKFVDATPFSGSLKKTDEKKASESDTLVDELGSKLTALGFNY 745
            MTIAMLLES+AAKGG LHGKFVDATPFS SL+K + +  SES +LVDELGS LT+ GFNY
Sbjct: 908  MTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNY 967

Query: 744  HGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKLGG 565
            HGVEVLYSG YGTELTCEIFIGPVYYQRLRHMVSDK+QVRS+G VD +TRQP+KGRK GG
Sbjct: 968  HGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGG 1027

Query: 564  GIRFGEMERDSLLAHGAAYXXXXXXXXXXXXHIADVCSICGSILTTSVAQPQKRIVREIA 385
            GIRFGEMERDS+LAHGAAY            HIADVCS+CGSILTTS+ QPQKR VREI 
Sbjct: 1028 GIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIG 1087

Query: 384  GIPPGRDPKKVACVACKTSKGMETVAMPYIFRYLAAELAAMNIKLTLQLKNEAGA 220
            G+PPGR PKKV C AC+TSKGMETV+MPYIFR+LAAELAAMNIK+TLQL N AGA
Sbjct: 1088 GLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1142



 Score =  448 bits (1153), Expect = e-123
 Identities = 223/331 (67%), Positives = 259/331 (78%)
 Frame = -2

Query: 3764 TTNPDFSALKEMVRHHIESFDHMLDFGLDTMAKKLKPVEVFDPVSKMKLRIWVGSPEVYP 3585
            T  PD+  L+E+ +HHI+SFDH+++FGL+T+   +KP                       
Sbjct: 3    TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP----------------------- 39

Query: 3584 PQKDNGKTLAATLYPFECRQARMSYDGKFMMDVYFQYDNGTPIREKFHFGQLPIMLMSNK 3405
                + +T+   LYPFECRQA++SY GK + DV FQY NG  IREKF+ GQ PIML S  
Sbjct: 40   ---RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKL 96

Query: 3404 CTLRNADPKKLVSLKEEASEAGGYFILNGLERVVRLLILQKRNYPMSMVRSSFRDRREGH 3225
            C LR ADP+KLVS KEE+SE GGYFILNGLERVVRLLIL KRNYPMSMVR+SFRDRREG+
Sbjct: 97   CHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGY 156

Query: 3224 TDKAVVIRCVREDQSALTVKLYYLSNGSARLGFWAQGKEYMLPVGLVLKALADTTDQEIY 3045
            TDKAVVIRCVREDQSA+TVKLYYL NGSARLGFW QG+EY+LPVG+VLKAL DTTD EIY
Sbjct: 157  TDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIY 216

Query: 3044 VSLTCCYNEKYERVKGSVGTQLVGERVKIILDEVRDLSLITHKQCLQHIGKHFQHIMPGM 2865
             SLTCCY+EKYE  KG+VGTQLVGERVKIILDEVRDLSL T  QCLQHIG+HFQ +M G+
Sbjct: 217  ESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGL 276

Query: 2864 DNESRSMVGDAVLKDYILVHLDDNRDKFNLL 2772
            +NES S+V DAVL++YI VHLD+N DKFNLL
Sbjct: 277  ENESYSIVADAVLREYIFVHLDNNYDKFNLL 307


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1254 bits (3245), Expect = 0.0
 Identities = 623/835 (74%), Positives = 705/835 (84%), Gaps = 3/835 (0%)
 Frame = -1

Query: 2715 FMLQKLFSLVDQTSAPDNPDALQNQEVLLPGHLITIYLKEKIQEWLLKAAKELRDVINSD 2536
            FM+QKLFSL+DQTS PDNPD LQNQEVLLPGHLITIYLKEK+QEWL KA + L+D IN  
Sbjct: 302  FMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINK- 360

Query: 2535 NKKFELMKINDVKKVMQTSSSKLIGTAIDNMLKTGRLVTRLGIDLPQSAGMTVQADRLNF 2356
             K FE   +  VKKVM  + S+ I  A++NMLKTGRLVT+ G+DL Q AGMTVQA+RLNF
Sbjct: 361  RKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNF 420

Query: 2355 LRFISHFRAVHRGASVAGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITS 2176
            LRF+SHFRAVHRGAS AGLRTTSVRKLLPE+WGF+CPVHTPDGEPCGLLNHM S CRITS
Sbjct: 421  LRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITS 480

Query: 2175 FYDSGRNLKDFFKMRKSILTILIGVGMIPSWPRLVKSGFPELFSVLLDGCVVGTISSNIV 1996
            ++DS  N +DFFK+R SIL++LIG+GM P+ P+LV++G PE+ SV+LDG VVG+I S+ V
Sbjct: 481  YFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEV 540

Query: 1995 EKAVAHLRRLKLSANSMIPDDLEIGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLLPPPTE 1816
            E AV HLRRLK+SA S+IPDDLE+GY+PLS+GG YPGLYLFT PSRFVRP +N+  P  E
Sbjct: 541  ETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEE 600

Query: 1815 SNNIELIGPFEQVYMEIRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSP 1636
             ++IELIGPFEQVYMEIRCPDG DGGR+++ PATHEEIHPTG+LS+VA+LTPWSDHNQSP
Sbjct: 601  GHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSP 660

Query: 1635 RNMYQCQMGKQTMGFASQALKCRADQKLYHLQTPQTPLVRTGTYEKYGIDEFPLGTNAIV 1456
            RNMYQCQMGKQTM F+SQA+ CRADQKLYHLQTPQTP+VRT  Y KY +DEFP GTNAIV
Sbjct: 661  RNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIV 720

Query: 1455 AVLAYSGYDMEDAMVLNKSSVDRGMCHGHIYQTESIDLAEE-KRSDRKNQMFRRDG--KS 1285
            AVLAYSGYDMEDAM+LNKSSVDRG+CHG IYQTE+IDL++E  +SDR  +MFRR    KS
Sbjct: 721  AVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKS 780

Query: 1284 SKSLIDSDGLPHVGQTIRPDEPYCNIYDADTSRTRSQKLKGTEPAIVDYVAVDVKNKKHL 1105
            + SLIDSDGLP+VGQ I P+EPYC+IY+  TS TR+ KLKG+EP IVDYVA+D KNKKH 
Sbjct: 781  ANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHP 840

Query: 1104 QKVNIRFRRQRNPVIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSR 925
            QKVNIRFRR RNP+IGDKFSSRHGQKGVCSQLW DIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 841  QKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 900

Query: 924  MTIAMLLESMAAKGGCLHGKFVDATPFSGSLKKTDEKKASESDTLVDELGSKLTALGFNY 745
            MTIAMLLES+AAKGG LHGKFVDATPFS SL+K + +  SES +LVDELGS LT+ GFNY
Sbjct: 901  MTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNY 960

Query: 744  HGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKLGG 565
            HGVEVLYSG YGTELTCEIFIGPVYYQRLRHMVSDK+QVRS+G VD +TRQP+KGRK GG
Sbjct: 961  HGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGG 1020

Query: 564  GIRFGEMERDSLLAHGAAYXXXXXXXXXXXXHIADVCSICGSILTTSVAQPQKRIVREIA 385
            GIRFGEMERDS+LAHGAAY            HIADVCS+CGSILTTS+ QPQKR      
Sbjct: 1021 GIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKR------ 1074

Query: 384  GIPPGRDPKKVACVACKTSKGMETVAMPYIFRYLAAELAAMNIKLTLQLKNEAGA 220
                             TSKGMETV+MPYIFR+LAAELAAMNIK+TLQL N AGA
Sbjct: 1075 ----------------ATSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1113



 Score =  438 bits (1127), Expect = e-120
 Identities = 214/285 (75%), Positives = 244/285 (85%), Gaps = 1/285 (0%)
 Frame = -2

Query: 3623 KLRIWVGSPEVYPPQKD-NGKTLAATLYPFECRQARMSYDGKFMMDVYFQYDNGTPIREK 3447
            ++ +W G PE+YPPQK+ + +T+   LYPFECRQA++SY GK + DV FQY NG  IREK
Sbjct: 16   RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREK 75

Query: 3446 FHFGQLPIMLMSNKCTLRNADPKKLVSLKEEASEAGGYFILNGLERVVRLLILQKRNYPM 3267
            F+ GQ PIML S  C LR ADP+KLVS KEE+SE GGYFILNGLERVVRLLIL KRNYPM
Sbjct: 76   FNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPM 135

Query: 3266 SMVRSSFRDRREGHTDKAVVIRCVREDQSALTVKLYYLSNGSARLGFWAQGKEYMLPVGL 3087
            SMVR+SFRDRREG+TDKAVVIRCVREDQSA+TVKLYYL NGSARLGFW QG+EY+LPVG+
Sbjct: 136  SMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGV 195

Query: 3086 VLKALADTTDQEIYVSLTCCYNEKYERVKGSVGTQLVGERVKIILDEVRDLSLITHKQCL 2907
            VLKAL DTTD EIY SLTCCY+EKYE  KG+VGTQLVGERVKIILDEVRDLSL T  QCL
Sbjct: 196  VLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCL 255

Query: 2906 QHIGKHFQHIMPGMDNESRSMVGDAVLKDYILVHLDDNRDKFNLL 2772
            QHIG+HFQ +M G++NES S+V DAVL++YI VHLD+N DKFNLL
Sbjct: 256  QHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLL 300


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 608/834 (72%), Positives = 705/834 (84%), Gaps = 4/834 (0%)
 Frame = -1

Query: 2715 FMLQKLFSLVDQTSAPDNPDALQNQEVLLPGHLITIYLKEKIQEWLLKAAKELRDVINSD 2536
            FM QKLFSL+DQTS PDNPD+LQNQ+VLLPG LIT+YLKEK+++WL K  K L D I++ 
Sbjct: 339  FMAQKLFSLIDQTSVPDNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKVKKLLEDEISNP 398

Query: 2535 NKKFELMKINDVKKVMQTSSSKLIGTAIDNMLKTGRLVTRLGIDLPQSAGMTVQADRLNF 2356
            +K FE   +  VKKVM  + SK + +A++NMLKTGRLVT+ G+DL Q AG TVQA+RLNF
Sbjct: 399  SKNFEFCSLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNF 458

Query: 2355 LRFISHFRAVHRGASVAGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITS 2176
            LRF+SHFRAVHRGAS AGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNH+TS CRITS
Sbjct: 459  LRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS 518

Query: 2175 FYDSGRNLKDFFKMRKSILTILIGVGMIPSWPRLVKSGFPELFSVLLDGCVVGTISSNIV 1996
             ++S   ++DF+K+R SIL++LI VGMIPS P+LV+ G P+  +VLLDG +VG ISSN V
Sbjct: 519  HFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEV 578

Query: 1995 EKAVAHLRRLKLSANSMIPDDLEIGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLLPPPTE 1816
            EK VAHLRRLK+ +  +IPDDLE+GYVPLSI G YPGLYLFT PSRFVRP KNL   P +
Sbjct: 579  EKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPED 638

Query: 1815 SNNIELIGPFEQVYMEIRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSP 1636
            ++NIELIGPFEQV+MEIRCPDGGDGGRKD  PATHEEIHPTG+LS+VANLTPWSDHNQSP
Sbjct: 639  NHNIELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP 698

Query: 1635 RNMYQCQMGKQTMGFASQALKCRADQKLYHLQTPQTPLVRTGTYEKYGIDEFPLGTNAIV 1456
            RNMYQCQM KQTM F+ QA++ RADQKLYHLQTPQTP+VRT TY KY IDE+P GTNAIV
Sbjct: 699  RNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 758

Query: 1455 AVLAYSGYDMEDAMVLNKSSVDRGMCHGHIYQTESIDLAEE-KRSDRKNQMFRRDG--KS 1285
            AVLAY+GYDMEDAM+LNKSSV+RGM HG IYQTE+IDL+++  RS R  +MFRR     S
Sbjct: 759  AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTS 818

Query: 1284 SKSLIDSDGLPHVGQTIRPDEPYCNIYDADTSRTRSQKLKGTEPAIVDYVAVDVKNKKHL 1105
             +S+ID+DGLP+VGQ I+PDEPYC+IYD     TR+ KLKG+E  IVDYV+VDVKNK + 
Sbjct: 819  VRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNP 878

Query: 1104 QKVNIRFRRQRNPVIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSR 925
            QKVNIRFRR RNP+IGDKFSSRHGQKGVCSQLW D+DMPF G TGMRPDLIINPHAFPSR
Sbjct: 879  QKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSR 938

Query: 924  MTIAMLLESMAAKGGCLHGKFVDATPFSGSLKKTDE-KKASESDTLVDELGSKLTALGFN 748
            MTIAML+ES+AAKGGCL+G+FV+ATPF  S+ KT+   + +  +TLVDELGS L   GFN
Sbjct: 939  MTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFN 998

Query: 747  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKLG 568
            YHG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRS+G VD +TRQP+KGRK G
Sbjct: 999  YHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKG 1058

Query: 567  GGIRFGEMERDSLLAHGAAYXXXXXXXXXXXXHIADVCSICGSILTTSVAQPQKRIVREI 388
            GGIRFGEMERDS+LAHGA+Y            HIADVCS+CGS+LT+S  QP KR VREI
Sbjct: 1059 GGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREI 1118

Query: 387  AGIPPGRDPKKVACVACKTSKGMETVAMPYIFRYLAAELAAMNIKLTLQLKNEA 226
             G+PPG+ PK+V C ACKTSKGMETVAMPY+F+YLAAELAAMNIK+TLQL + A
Sbjct: 1119 GGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSSGA 1172



 Score =  476 bits (1225), Expect = e-131
 Identities = 229/330 (69%), Positives = 269/330 (81%), Gaps = 1/330 (0%)
 Frame = -2

Query: 3758 NPDFSALKEMVRHHIESFDHMLDFGLDTMAKKLKPVEVFDPVSKMKLRIWVGSPEVYPPQ 3579
            N D+ AL+E+ RHHIESFDH++D GL+T+   +KPVE++D  +  KLRIW+G PE+YPPQ
Sbjct: 8    NEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQ 67

Query: 3578 KD-NGKTLAATLYPFECRQARMSYDGKFMMDVYFQYDNGTPIREKFHFGQLPIMLMSNKC 3402
            K+ N +T+   L P+ECRQA++SY GKFM DV FQYD    IREKF+FGQ PIML S  C
Sbjct: 68   KERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLC 127

Query: 3401 TLRNADPKKLVSLKEEASEAGGYFILNGLERVVRLLILQKRNYPMSMVRSSFRDRREGHT 3222
             LR  DPKKLVS  EEASE GGYF++NGLERVVRLLI  KRNYP SMVR+SF DRREG+T
Sbjct: 128  HLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYT 187

Query: 3221 DKAVVIRCVREDQSALTVKLYYLSNGSARLGFWAQGKEYMLPVGLVLKALADTTDQEIYV 3042
            DKAVVIRCVREDQS++TVKLYYL NGSARLGFW QGKEY+LP+G+VLKAL DTTD EIY 
Sbjct: 188  DKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYA 247

Query: 3041 SLTCCYNEKYERVKGSVGTQLVGERVKIILDEVRDLSLITHKQCLQHIGKHFQHIMPGMD 2862
            SLT CY++K+ + KG+VGTQLVGER KIILDEVRDL+L  H+QCL HIG+HFQ +M G+ 
Sbjct: 248  SLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLG 307

Query: 2861 NESRSMVGDAVLKDYILVHLDDNRDKFNLL 2772
             E  S V DAVLKDYI VHLD+N DKFNLL
Sbjct: 308  KEKFSTVADAVLKDYIFVHLDNNYDKFNLL 337


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score = 1239 bits (3205), Expect = 0.0
 Identities = 611/835 (73%), Positives = 696/835 (83%), Gaps = 3/835 (0%)
 Frame = -1

Query: 2715 FMLQKLFSLVDQTSAPDNPDALQNQEVLLPGHLITIYLKEKIQEWLLKAAKELRDVINSD 2536
            FMLQKLFSL+DQTS PDNPD+LQN EVLLPGHLIT+YLKEK+++WL K  + L D I+  
Sbjct: 339  FMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKK 398

Query: 2535 NKKFELMKINDVKKVMQTSSSKLIGTAIDNMLKTGRLVTRLGIDLPQSAGMTVQADRLNF 2356
            +KKF+   I  VKKVM  +S K + TA++NMLKTGRLVT+ G+DL Q AG TVQA+RLNF
Sbjct: 399  SKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNF 458

Query: 2355 LRFISHFRAVHRGASVAGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITS 2176
            LRF+SHFRAVHRGAS AGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT   RITS
Sbjct: 459  LRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITS 518

Query: 2175 FYDSGRNLKDFFKMRKSILTILIGVGMIPSWPRLVKSGFPELFSVLLDGCVVGTISSNIV 1996
            F+DS  N+KD+FK++ SIL +L+ VGM PS P++   G PE  +VLLDGCVVG I+S+  
Sbjct: 519  FFDSQGNVKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEA 578

Query: 1995 EKAVAHLRRLKLSANSMIPDDLEIGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLLPPPTE 1816
            EK VAH+R LK+S+ ++IPDD+E+GYVPLS+GG YPGLYL T PSRFVRP +N+  P   
Sbjct: 579  EKVVAHIRELKVSSAAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNG 638

Query: 1815 SNNIELIGPFEQVYMEIRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSP 1636
            S NIE IGPFEQV+MEIRCPDGGDGGRK   PATHEEIHPT +LS+VANLTPWSDHNQSP
Sbjct: 639  SENIEFIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSP 698

Query: 1635 RNMYQCQMGKQTMGFASQALKCRADQKLYHLQTPQTPLVRTGTYEKYGIDEFPLGTNAIV 1456
            RNMYQCQM KQTM F+SQ ++ RADQKLYHLQTPQTP+VRT TY KY IDEFP GTNAIV
Sbjct: 699  RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIV 758

Query: 1455 AVLAYSGYDMEDAMVLNKSSVDRGMCHGHIYQTESIDLAEE-KRSDRKNQMFRRDG--KS 1285
            AVLAY+GYDMEDAM+LNKSSV+RGM HG IYQTE+IDL E+  R DR ++MFR+    KS
Sbjct: 759  AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKS 818

Query: 1284 SKSLIDSDGLPHVGQTIRPDEPYCNIYDADTSRTRSQKLKGTEPAIVDYVAVDVKNKKHL 1105
            +   IDSDGLPHVGQ IRPDEPYC+IY+  TS   + K KG+E   VDYVAVDVKNKKHL
Sbjct: 819  ACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHL 878

Query: 1104 QKVNIRFRRQRNPVIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSR 925
            QKVNIRFR  RNPVIGDKFSSRHGQKGVCSQLW D+DMPFSG TGMRPDLIINPHAFPSR
Sbjct: 879  QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSR 938

Query: 924  MTIAMLLESMAAKGGCLHGKFVDATPFSGSLKKTDEKKASESDTLVDELGSKLTALGFNY 745
            MTIAMLLES+AAKGG L G+FVDATPF  S+KK   +  S S ++VD+LG  L   GFNY
Sbjct: 939  MTIAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNY 998

Query: 744  HGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKLGG 565
            HG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVRS+G +D +TRQP+KGRK GG
Sbjct: 999  HGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGG 1058

Query: 564  GIRFGEMERDSLLAHGAAYXXXXXXXXXXXXHIADVCSICGSILTTSVAQPQKRIVREIA 385
            GIRFGEMERDSLLAHGAAY            HIADVCS+CGS+LTT+  QPQKR VREI 
Sbjct: 1059 GIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIG 1118

Query: 384  GIPPGRDPKKVACVACKTSKGMETVAMPYIFRYLAAELAAMNIKLTLQLKNEAGA 220
            G+PPGR PKKV C AC+TSKGMETVAMPY+FRYLAAELAAMNIK+TL+L + AGA
Sbjct: 1119 GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGA 1173



 Score =  461 bits (1187), Expect = e-127
 Identities = 222/329 (67%), Positives = 273/329 (82%), Gaps = 1/329 (0%)
 Frame = -2

Query: 3755 PDFSALKEMVRHHIESFDHMLDFGLDTMAKKLKPVEVFDPVSKMKLRIWVGSPEVYPPQK 3576
            PDF AL+E+ +HHIESFD+M D GL+TM + +KP+EVFD  +  KLRIW+ +P +YPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3575 DN-GKTLAATLYPFECRQARMSYDGKFMMDVYFQYDNGTPIREKFHFGQLPIMLMSNKCT 3399
            +   +T+   L PFECRQA++SY GK  +DV FQY++G  IRE  +FGQ PIML S  C 
Sbjct: 69   ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCN 128

Query: 3398 LRNADPKKLVSLKEEASEAGGYFILNGLERVVRLLILQKRNYPMSMVRSSFRDRREGHTD 3219
            LR ADP+KLVS +EEASE GGYFILNGLERV+RLLIL KRN+PMSMVR+SF DRREG+TD
Sbjct: 129  LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 3218 KAVVIRCVREDQSALTVKLYYLSNGSARLGFWAQGKEYMLPVGLVLKALADTTDQEIYVS 3039
            KA+VIRCVR DQS+L+V+LYYL NGSARLGFW +G+EY+LPVG++LKAL DTTD+EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3038 LTCCYNEKYERVKGSVGTQLVGERVKIILDEVRDLSLITHKQCLQHIGKHFQHIMPGMDN 2859
            LT CYNEKYE+ KG+VGTQLVGER KIILDE+RDLSL T  QCL++IG+HFQ ++  + N
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 2858 ESRSMVGDAVLKDYILVHLDDNRDKFNLL 2772
            +S  +V +AVLKD ILVHLD+N DKFNLL
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLL 337


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 612/834 (73%), Positives = 706/834 (84%), Gaps = 4/834 (0%)
 Frame = -1

Query: 2715 FMLQKLFSLVDQTSAPDNPDALQNQEVLLPGHLITIYLKEKIQEWLLKAAKELRDVINSD 2536
            FMLQKLFSLVDQTS  DNPD+LQNQEVLLPGHL+TIYLKEK++EWL KA K L++ I + 
Sbjct: 325  FMLQKLFSLVDQTSVVDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEI-AK 383

Query: 2535 NKKFELMKINDVKKVMQTSSSKLIGTAIDNMLKTGRLVTRLGIDLPQSAGMTVQADRLNF 2356
            N  F  + + DVKKV+  + S  I  A++NMLKTGRLVT+ G+DL Q AG TVQA+RLNF
Sbjct: 384  NNNFNFLSVLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNF 443

Query: 2355 LRFISHFRAVHRGASVAGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITS 2176
            LRF+S FRAVHRGAS AGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT  CRITS
Sbjct: 444  LRFLSFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITS 503

Query: 2175 FYDSGRNLKDFFKMRKSILTILIGVGMIPSWPRLVKSGFPELFSVLLDGCVVGTISSNIV 1996
            ++DS   +KDFF +RKSIL +L  +GM  S P+LV++G P++ SVLLDG VVG+I S+ V
Sbjct: 504  YFDSQGAVKDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQV 563

Query: 1995 EKAVAHLRRLKLSANSMIPDDLEIGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLLPPPTE 1816
            EK V HLRRLK++A+S+IPDDLE+GYVPLS+GG +PGLYLFT PSRF+RP KN+  P  E
Sbjct: 564  EKVVVHLRRLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGE 623

Query: 1815 SNNIELIGPFEQVYMEIRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSP 1636
              NIELIGPFEQV+MEIRCPDGG+GGR D  PATHEEIHPT +LS+VANLTPWSDHNQSP
Sbjct: 624  GENIELIGPFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSP 683

Query: 1635 RNMYQCQMGKQTMGFASQALKCRADQKLYHLQTPQTPLVRTGTYEKYGIDEFPLGTNAIV 1456
            RNMYQCQM KQTM F+ Q+L+ RADQKLYHLQTPQTP+VRT +Y KY +DE+P GTNAIV
Sbjct: 684  RNMYQCQMAKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIV 743

Query: 1455 AVLAYSGYDMEDAMVLNKSSVDRGMCHGHIYQTESIDLAEE-KRSDRKNQMFRRDG--KS 1285
            AVLAY+GYDMEDAM+LNKSSV+RGMCHG IYQTE+IDL+EE  RSDR  +MFRR    KS
Sbjct: 744  AVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKS 803

Query: 1284 SKSLIDSDGLPHVGQTIRPDEPYCNIYDADTSRTRSQKLKGTEPAIVDYVAVDVKNKKHL 1105
              S+IDSDGLP+VGQ I P+EPYC+IY+  T+ TR+   KG++P IVDYVA+D KNKKHL
Sbjct: 804  LHSVIDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHL 863

Query: 1104 QKVNIRFRRQRNPVIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSR 925
            QKVNIRFR  RNP+IGDKFSSRHGQKGVCSQLW DIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 864  QKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 923

Query: 924  MTIAMLLESMAAKGGCLHGKFVDATPFSGSLKKTDEKKA-SESDTLVDELGSKLTALGFN 748
            MTIAMLLES+AAKGG L+GKFVDATPF+ S+K  +  +A SES++LVD+LG+ L + GFN
Sbjct: 924  MTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFN 983

Query: 747  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKLG 568
            YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVRS+G VD +TRQP+KGRK G
Sbjct: 984  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRG 1043

Query: 567  GGIRFGEMERDSLLAHGAAYXXXXXXXXXXXXHIADVCSICGSILTTSVAQPQKRIVREI 388
            GGIRFGEMERD++LAHGAAY            HIADVCS+CGSILTTS  Q QKR+VR+I
Sbjct: 1044 GGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDI 1103

Query: 387  AGIPPGRDPKKVACVACKTSKGMETVAMPYIFRYLAAELAAMNIKLTLQLKNEA 226
             G+PP   PKKVAC +C+TSKGMETVAMPY+FRYLAAELAAMNIK+ +QL   A
Sbjct: 1104 GGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157



 Score =  400 bits (1028), Expect = e-108
 Identities = 206/350 (58%), Positives = 255/350 (72%), Gaps = 6/350 (1%)
 Frame = -2

Query: 3803 VATMSSKKVPPHRTTNPDFSALKEMVRHHIESFDHMLDFGLDTMAKKLKPVEVFDPVSKM 3624
            +++MS+KK  P      D+SAL+E+ RHHI+SFD+M++ GL+ M   +KP          
Sbjct: 1    MSSMSAKKENPSSAMG-DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP---------- 49

Query: 3623 KLRIWVGSPEVYPPQKDNGKTLAATLYPFECRQARMSYDGKFMMDVYFQYDNGTPIREKF 3444
                            ++ +T    L PFECRQA++SY GKF  DV F+Y     IREK+
Sbjct: 50   ----------------ESSRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKY 93

Query: 3443 HFGQLPIMLMSNKCTLRNADPKKLVSLKEEASEAGGYFILNGLERVVRLLILQKRNYPMS 3264
            +FGQLPIML S  C L   D ++LVS  EE++E GGYFILNGLERVVRLLI+ KRNYPMS
Sbjct: 94   NFGQLPIMLKSRLCHLYGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMS 153

Query: 3263 MVRSSFRDRREGHTDKAVVIRCVRE------DQSALTVKLYYLSNGSARLGFWAQGKEYM 3102
             VR SFRDRREG+TDKAVVIRCVRE      DQS+++VKLYYL +GSARLGFW QG+EY+
Sbjct: 154  TVRGSFRDRREGYTDKAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYL 213

Query: 3101 LPVGLVLKALADTTDQEIYVSLTCCYNEKYERVKGSVGTQLVGERVKIILDEVRDLSLIT 2922
            LP G+VLKALA+TTD+EIY  LTCCY+EKYE+ KG+VG+QLVGER KIILDEVRDLSL T
Sbjct: 214  LPAGIVLKALAETTDREIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFT 273

Query: 2921 HKQCLQHIGKHFQHIMPGMDNESRSMVGDAVLKDYILVHLDDNRDKFNLL 2772
              +CL+HIG+HFQ +M G++ E+ S V  AVLKDYI VHL++  DKFNLL
Sbjct: 274  QSECLRHIGEHFQPVMDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLL 323