BLASTX nr result

ID: Angelica23_contig00011939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011939
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    74   1e-11
emb|CBI32131.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    74   2e-11
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    73   3e-11
ref|XP_003557630.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    72   4e-11

>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = -2

Query: 310 FTPVQGIELSNPQALANQLGSGTQSTYFCETGTFSKIKR 194
           FTPVQGIELSNPQA A+QLGSGTQSTYF ETGTFSKIKR
Sbjct: 447 FTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSKIKR 485


>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = -2

Query: 310 FTPVQGIELSNPQALANQLGSGTQSTYFCETGTFSKIKR 194
           FTPVQGIELSNPQA ANQLGSGTQSTYF E GTFSKIKR
Sbjct: 484 FTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKR 522


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = -2

Query: 310 FTPVQGIELSNPQALANQLGSGTQSTYFCETGTFSKIKR 194
           FTPVQGIELSNPQA ANQLGSGTQSTYF E GTFSKIKR
Sbjct: 450 FTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKR 488


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -2

Query: 310 FTPVQGIELSNPQALANQLGSGTQSTYFCETGTFSKIKR 194
           FTPVQGIEL+NPQA A+QLGSGTQSTYF ETGTFSKIKR
Sbjct: 447 FTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFSKIKR 485


>ref|XP_003557630.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Brachypodium distachyon]
          Length = 454

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/39 (89%), Positives = 35/39 (89%)
 Frame = -2

Query: 310 FTPVQGIELSNPQALANQLGSGTQSTYFCETGTFSKIKR 194
           FTPVQGIELSNPQA  N LGSGTQSTYF ETGTFSKIKR
Sbjct: 415 FTPVQGIELSNPQAHGNHLGSGTQSTYFSETGTFSKIKR 453


Top