BLASTX nr result

ID: Angelica23_contig00011785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011785
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   177   2e-42
ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   166   4e-39
ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...   164   1e-38
ref|XP_002305996.1| high mobility group family [Populus trichoca...   164   1e-38
gb|AFK38905.1| unknown [Medicago truncatula]                          163   3e-38

>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  177 bits (449), Expect = 2e-42
 Identities = 102/173 (58%), Positives = 118/173 (68%), Gaps = 25/173 (14%)
 Frame = -1

Query: 644 MVKKAKN-SPAS---------PSTETSRKM----------VLRVRPPQKMKQ--VEDDII 531
           MVKKAK  SPAS         P+T T  KM          VLRVR  +K+K+  +E  + 
Sbjct: 1   MVKKAKKRSPASSSVSSPATNPNTMTKEKMALRVTSTERMVLRVRSTEKIKRAVMESRVS 60

Query: 530 EEXXXXXXXXXXXXXXXXK---IDSDKPKKPPTAFFYFLEDFRKGFQEENPKVKSMRDVG 360
           E+                +   +DS KPKKPPTAFFYFLEDFRK FQE+NP VKSMRD+G
Sbjct: 61  EKEKKPRSGNKAKAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIG 120

Query: 359 KACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIKRKESGEDTKSKDSDS 201
           KACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIKR+ESGED + +DS++
Sbjct: 121 KACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIKRQESGEDEEIEDSEA 173


>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  166 bits (420), Expect = 4e-39
 Identities = 89/156 (57%), Positives = 109/156 (69%), Gaps = 2/156 (1%)
 Frame = -1

Query: 650 KVMVKKAKNSPA--SPSTETSRKMVLRVRPPQKMKQVEDDIIEEXXXXXXXXXXXXXXXX 477
           K M K+A NS    S S+ TS K + ++    K K+ +   I +                
Sbjct: 56  KKMAKRASNSKKHRSSSSSTSTKSITKISNGVKDKRAKPKRISKRQIAK----------- 104

Query: 476 KIDSDKPKKPPTAFFYFLEDFRKGFQEENPKVKSMRDVGKACGEKWKTMTYEEKVQYYDI 297
            +DS KPKKPPTAFFYFLEDFRK FQ++NP VKSMR++GKACGEKWK MTYEEKV+YYDI
Sbjct: 105 -LDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDI 163

Query: 296 ATEKRAEFDRAMADYIKRKESGEDTKSKDSDSEYDE 189
           ATEKRAEFD+AMA+YIK+KESGE  + +D DSE+DE
Sbjct: 164 ATEKRAEFDKAMAEYIKKKESGEFEEVED-DSEFDE 198


>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score =  164 bits (415), Expect = 1e-38
 Identities = 86/153 (56%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = -1

Query: 644 MVKKAKNS-PASPSTETSRKMVLRVRPPQKMKQVEDDIIEEXXXXXXXXXXXXXXXXKID 468
           M KKAK S  AS ++ +SRK+VLR++  + +K+     + +                  D
Sbjct: 1   MAKKAKGSHSASSASASSRKLVLRIKSNEGIKRS----VRQTNSRKKPKAKQKKNKQMFD 56

Query: 467 SDKPKKPPTAFFYFLEDFRKGFQEENPKVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE 288
           + KPKKPPTAFFYFLEDFRK FQE+NP VKSMRD+GKACGEKWKTMTYEEKVQYYDIAT+
Sbjct: 57  AMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATK 116

Query: 287 KRAEFDRAMADYIKRKESGEDTKSKDSDSEYDE 189
           KR EFD AMA++ K+ E+GE  ++ D +SE+DE
Sbjct: 117 KREEFDNAMAEFNKKMENGEFDET-DDESEFDE 148


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  164 bits (415), Expect = 1e-38
 Identities = 89/155 (57%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
 Frame = -1

Query: 638 KKAKNSPASPSTETSR-----KMVLRVRPPQKMKQVEDDIIEEXXXXXXXXXXXXXXXXK 474
           + + +S  + ST + R     KMVLR+R  +  K+                        K
Sbjct: 12  RSSSSSSLASSTSSKRVSKEGKMVLRIRSNEITKRSTRQQRVVRSENERRPKSKTKKNKK 71

Query: 473 IDSDKPKKPPTAFFYFLEDFRKGFQEENPKVKSMRDVGKACGEKWKTMTYEEKVQYYDIA 294
            D+ KPKKPPTAFFYFLEDFRK FQE+NP VKSMR+VGKACGEKWKTMTYEEKV+YYDIA
Sbjct: 72  FDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIA 131

Query: 293 TEKRAEFDRAMADYIKRKESGEDTKSKDSDSEYDE 189
           TEKRAEFDRA ++YIKRKESGED   +D+ SE+DE
Sbjct: 132 TEKRAEFDRATSEYIKRKESGEDEDPEDA-SEFDE 165


>gb|AFK38905.1| unknown [Medicago truncatula]
          Length = 152

 Score =  163 bits (413), Expect = 3e-38
 Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
 Frame = -1

Query: 644 MVKKAKNS-----PASPSTETSRKMVLRVRPPQKMKQVEDDIIEEXXXXXXXXXXXXXXX 480
           M KKAK S      +S S  TS K+VL ++  + MK+     + +               
Sbjct: 1   MAKKAKASNSLKNASSSSASTSGKLVLAIKSNEGMKRS----LRQTKSRDITKAVQKKNK 56

Query: 479 XKIDSDKPKKPPTAFFYFLEDFRKGFQEENPKVKSMRDVGKACGEKWKTMTYEEKVQYYD 300
            KID+ KPKKPPTAFFYFLEDFRK F+++NP VKSMRD+GKACGEKWKTMT+EEKVQYYD
Sbjct: 57  QKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYYD 116

Query: 299 IATEKRAEFDRAMADYIKRKESGEDTKSKDSDSEYDE 189
           IATEKRAEFDRA  +Y K+ ESGE  +  D +SEYDE
Sbjct: 117 IATEKRAEFDRATTEYNKKMESGE-YEETDEESEYDE 152


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