BLASTX nr result

ID: Angelica23_contig00011750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011750
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]           129   2e-27
ref|XP_002311164.1| f-box family protein [Populus trichocarpa] g...   117   7e-24
ref|XP_002299879.1| f-box family protein [Populus trichocarpa] g...   113   1e-22
ref|XP_002314189.1| f-box family protein [Populus trichocarpa] g...   106   1e-20
ref|XP_002876297.1| obf-binding protein 3 [Arabidopsis lyrata su...   100   6e-19

>emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]
          Length = 324

 Score =  129 bits (323), Expect = 2e-27
 Identities = 92/252 (36%), Positives = 121/252 (48%), Gaps = 13/252 (5%)
 Frame = +1

Query: 1   SLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXXXITNNNNQKGXXXXX 180
           +L+QPRHFCKTCRRYWTRGGALRSVPVGGGC                T  +N        
Sbjct: 90  NLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKSNNNNNSSKTAGSNVNTNTIAS 149

Query: 181 XXXXXXXXXXADQMVTNHNNPFSSQ-----VPLMAALQNLNSHYGAAAGSTYGGFQMGNG 345
                         + N  + FS +      PLMAA QNLN HYG            GNG
Sbjct: 150 GTSTSASPSSCSTEIMNGRHHFSHEQPPQLTPLMAAFQNLNHHYGGFQPPPLVSTHHGNG 209

Query: 346 SSG---QSDMGFQLGHN-NTSNVTNNILTSGGAQGTWRLPILTGFEQPSASNLFSYQ--- 504
           +       +MGFQ+G + NT+N+   +   GG+   WRLP L      + +NL+ +Q   
Sbjct: 210 TGALGHHHEMGFQIGSSTNTNNLP--VPPGGGSDHQWRLPSLA-----ANTNLYPFQHGT 262

Query: 505 GEGI-EAASAGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXXXXQYWGTGGGNSWTTD 681
            +GI E++S     +      GLN ++QFLG  +            QYW   GGN+WT  
Sbjct: 263 DQGIHESSSVNNNNINAHDDQGLNSTKQFLGTMEN--------NTNQYW---GGNAWTG- 310

Query: 682 FTSHINNTSSAS 717
             S +N++SSAS
Sbjct: 311 -FSGLNSSSSAS 321


>ref|XP_002311164.1| f-box family protein [Populus trichocarpa]
           gi|222850984|gb|EEE88531.1| f-box family protein
           [Populus trichocarpa]
          Length = 334

 Score =  117 bits (292), Expect = 7e-24
 Identities = 88/264 (33%), Positives = 120/264 (45%), Gaps = 32/264 (12%)
 Frame = +1

Query: 1   SLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXXXITNNNNQKGXXXXX 180
           SL+QPRHFCKTCRRYWT GGALR+VPVGGGC               I   ++  G     
Sbjct: 93  SLSQPRHFCKTCRRYWTSGGALRNVPVGGGCRRNKRSKGSGRSKFPIKAVSSSSG----- 147

Query: 181 XXXXXXXXXXADQMVTNHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGGFQ--MGNGSSG 354
                     AD  +  H  P   Q+P++  L +L  +  A  G  +GG Q  +G  + G
Sbjct: 148 --GLASNCCTAD--ILGHMPPPPPQLPILPPLHHLGDYNSADIGLDFGGIQHSIGVTAGG 203

Query: 355 QSDMGFQLGHNNTSNVTNNILTSGGAQGTWRL----------PILTGFEQPSASNLFSYQ 504
              + FQ+G + +SN     L S G    WRL          P  +  E P  S LFS++
Sbjct: 204 GDGVEFQIGSSTSSNGVAGSLLSSGLVEQWRLQQVQQQVQQFPFFSNMEPP--SGLFSFE 261

Query: 505 GEGIEAAS-AGPVK--------------VEETRGGGLNLSRQFLGVSDQXXXXXXXXXXX 639
           G GIE+++ AG ++              V+      LNLS++ LG+S             
Sbjct: 262 GGGIESSNYAGQIRSKPLDTTGVTHLATVKTEENQRLNLSKKVLGIS----------GID 311

Query: 640 QYWGTGGGNSWT-----TDFTSHI 696
           Q+W  GG N+WT     T  TSH+
Sbjct: 312 QHW--GGNNAWTDLPGFTSSTSHL 333


>ref|XP_002299879.1| f-box family protein [Populus trichocarpa]
           gi|222847137|gb|EEE84684.1| f-box family protein
           [Populus trichocarpa]
          Length = 332

 Score =  113 bits (282), Expect = 1e-22
 Identities = 86/261 (32%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
 Frame = +1

Query: 1   SLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXXXITNNNNQKGXXXXX 180
           +L+QPRHFCKTCRRYWTRGGALRSVPVGGGC               +++           
Sbjct: 100 NLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKRKVQSSSKSPVSSERQ-------- 151

Query: 181 XXXXXXXXXXADQMVTNHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGGFQ----MGNGS 348
                         V  H     SQ+P M +L NL        G  +GG Q      +G+
Sbjct: 152 VGSTSSSTSALPSQVIGHLPQQQSQLPYMTSLHNLAQFGEGNIGLNFGGIQGQLGSTSGA 211

Query: 349 SGQSDMGFQLGHNNTSNVTNNILTSGGAQGTWRLPILTGFEQPSASNLFSYQGEGIE--- 519
           SGQ+DMGFQ+G N+  N ++ IL++GG     + P    F + S + L+  Q EG E   
Sbjct: 212 SGQTDMGFQIGSNSGMN-SSAILSAGGVH---QFP----FFEFSPAGLYPLQSEGAETPI 263

Query: 520 ----------------AASAGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXXXXQYWG 651
                            +   PVK E  +  GLNLS+ +LG                YW 
Sbjct: 264 SVHGDNQLQSMTSSSRVSQLAPVKTEGNQ--GLNLSKPYLGAPQN---------NQYYW- 311

Query: 652 TGGGNSWTTDFTSHINNTSSA 714
             GGN+W     S +N++S++
Sbjct: 312 --GGNTWAD--LSGLNSSSTS 328


>ref|XP_002314189.1| f-box family protein [Populus trichocarpa]
           gi|222850597|gb|EEE88144.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score =  106 bits (264), Expect = 1e-20
 Identities = 83/261 (31%), Positives = 120/261 (45%), Gaps = 23/261 (8%)
 Frame = +1

Query: 1   SLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXXXITNNNNQKGXXXXX 180
           SL+QPRHFCKTCRRYWTRGGALRSVPVGGGC               +++           
Sbjct: 92  SLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKTKSQSSSKSPVSSERQMGSTSSTS 151

Query: 181 XXXXXXXXXXADQMVTNHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGGFQ--MGN--GS 348
                         +  H     +Q P + +L NL        G  +GG Q  MG+  G+
Sbjct: 152 SSALP-------SQIIGHFPQQQTQFPFVTSLHNLTQFGVGNIGLNFGGIQGQMGSTSGA 204

Query: 349 SGQSDMGFQLGHNNTSNVTNNILTSGGAQGTWRLPILTGFEQPSASNLFSYQG-EGIEAA 525
           SGQ+ M FQ+G + +   +++I ++GG Q   + P    FE P A  L+ +Q  +G EA 
Sbjct: 205 SGQAGMEFQMG-SGSGMSSSSIFSAGGVQ---QFPF---FESPPA-GLYPFQSDQGAEAP 256

Query: 526 SAGPVKVEETR------------------GGGLNLSRQFLGVSDQXXXXXXXXXXXQYWG 651
           +  P +  + R                    GLNLS+ +LG+ +             YW 
Sbjct: 257 TGIPGESSQLRSMASSSRVSQLAPVKSEGNQGLNLSKPYLGIPEN---------NQYYW- 306

Query: 652 TGGGNSWTTDFTSHINNTSSA 714
             GGN+WT    S +N++S++
Sbjct: 307 --GGNTWTD--LSGLNSSSTS 323


>ref|XP_002876297.1| obf-binding protein 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297322135|gb|EFH52556.1| obf-binding protein 3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  100 bits (249), Expect = 6e-19
 Identities = 89/270 (32%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
 Frame = +1

Query: 1   SLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXXXITNNNNQKGXXXXX 180
           SLTQPRHFCKTCRRYWTRGGALR+VPVGGG                ++ +NN        
Sbjct: 94  SLTQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSKSRSKSTVVVSTDNN----TTTS 149

Query: 181 XXXXXXXXXXADQMVTNHNNP-FSSQVPLMAALQNLNSHYGAAAGSTYGGFQMGNGSSGQ 357
                       + ++    P FSS +P++  LQ+L  +  +  G  +GG Q+GN  SG 
Sbjct: 150 PLTSRPSYSNPSKFLSYGQVPGFSSNLPILPPLQSLGDYNSSNTGLDFGGIQIGNVISGM 209

Query: 358 SDMGFQL---------------------GHNNTSNVTNNILTSGGA--QGTWRLPILTGF 468
           S  G  L                     G   +SN    +L   G   QG  +       
Sbjct: 210 SSSGGILDPWRIPSSQQAQQFPFLINTTGLVQSSNALYPLLEGNGGVNQGDSQQKSSDYS 269

Query: 469 EQPSASNLFSYQGEGIEAASAGPVKVEET---RG----GGLNLSRQFLGVSDQXXXXXXX 627
            Q  +  L      G  AA A  VK EE    RG    GG NLSR FLG           
Sbjct: 270 NQLMSKPLMDLASGGDGAAQARNVKAEENDQDRGRDGDGGNNLSRNFLG-----NININS 324

Query: 628 XXXXQYWGTGGGNSWTTDFTSHINNTSSAS 717
               +Y   GG +SW T F+S+ N+T   S
Sbjct: 325 ARNDEYTSWGGNSSW-TGFSSN-NSTGHLS 352


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