BLASTX nr result

ID: Angelica23_contig00011715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011715
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGF80398.1| hypothetical protein BATDEDRAFT_35091 [Batrachoch...    68   4e-12
ref|XP_003593554.1| Splicing factor 3B subunit [Medicago truncat...    68   4e-12
ref|XP_003593555.1| Splicing factor 3B subunit [Medicago truncat...    68   4e-12
ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...    66   1e-11
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...    66   1e-11

>gb|EGF80398.1| hypothetical protein BATDEDRAFT_35091 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 658

 Score = 68.2 bits (165), Expect(2) = 4e-12
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 25  ICSSQSYGPPPSYLLQMKIPGLNTPIPHGALSGYHPGGWGKP 150
           + + Q YGPPPSY  Q+KIPGLN PIP GA  GYHPGGWGKP
Sbjct: 375 LINMQRYGPPPSYP-QLKIPGLNAPIPDGAQWGYHPGGWGKP 415



 Score = 27.7 bits (60), Expect(2) = 4e-12
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   APPPWLINMQ 32
           APPPWLINMQ
Sbjct: 370 APPPWLINMQ 379


>ref|XP_003593554.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355482602|gb|AES63805.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 578

 Score = 68.2 bits (165), Expect(2) = 4e-12
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 25  ICSSQSYGPPPSYLLQMKIPGLNTPIPHGALSGYHPGGWGKP 150
           + + Q YGPPPSY  Q+KIPGLN PIP GA  GYHPGGWGKP
Sbjct: 315 LINMQRYGPPPSYP-QLKIPGLNAPIPAGASFGYHPGGWGKP 355



 Score = 27.7 bits (60), Expect(2) = 4e-12
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   APPPWLINMQ 32
           APPPWLINMQ
Sbjct: 310 APPPWLINMQ 319


>ref|XP_003593555.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355482603|gb|AES63806.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 523

 Score = 68.2 bits (165), Expect(2) = 4e-12
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 25  ICSSQSYGPPPSYLLQMKIPGLNTPIPHGALSGYHPGGWGKP 150
           + + Q YGPPPSY  Q+KIPGLN PIP GA  GYHPGGWGKP
Sbjct: 260 LINMQRYGPPPSYP-QLKIPGLNAPIPAGASFGYHPGGWGKP 300



 Score = 27.7 bits (60), Expect(2) = 4e-12
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   APPPWLINMQ 32
           APPPWLINMQ
Sbjct: 255 APPPWLINMQ 264


>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 590

 Score = 66.2 bits (160), Expect(2) = 1e-11
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +1

Query: 25  ICSSQSYGPPPSYLLQMKIPGLNTPIPHGALSGYHPGGWGKP 150
           + + Q YGPPPSY   +KIPGLN PIP GA  GYHPGGWGKP
Sbjct: 341 LINMQRYGPPPSYP-HLKIPGLNAPIPPGASFGYHPGGWGKP 381



 Score = 27.7 bits (60), Expect(2) = 1e-11
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   APPPWLINMQ 32
           APPPWLINMQ
Sbjct: 336 APPPWLINMQ 345


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score = 66.2 bits (160), Expect(2) = 1e-11
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +1

Query: 25  ICSSQSYGPPPSYLLQMKIPGLNTPIPHGALSGYHPGGWGKP 150
           + + Q YGPPPSY   +KIPGLN PIP GA  GYHPGGWGKP
Sbjct: 330 LINMQRYGPPPSYP-DLKIPGLNAPIPPGASFGYHPGGWGKP 370



 Score = 27.7 bits (60), Expect(2) = 1e-11
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   APPPWLINMQ 32
           APPPWLINMQ
Sbjct: 325 APPPWLINMQ 334


Top