BLASTX nr result

ID: Angelica23_contig00011599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011599
         (1888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU24484.1| unknown [Glycine max]                                  204   9e-50
ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin...   204   9e-50
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-48
gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   199   3e-48
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   198   5e-48

>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  204 bits (518), Expect = 9e-50
 Identities = 104/153 (67%), Positives = 112/153 (73%)
 Frame = -2

Query: 1407 MSGRFSRTIYVGSLPLDIKEREIDDLFYKYGRIVDIELKVPPRPPCYCFVEFESSXXXXX 1228
            MSGRFSRTIYVG+LP DI+E EI+DLFYKYGRI+DIELKVPPRPPCYCFVEF+++     
Sbjct: 1    MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 1227 XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRHSEFRVIV 1048
                  GYNFDGCRLRVELAH                           GISRHSEFRVIV
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120

Query: 1047 RGLPSSASWQDLKDHMRKAGDVCFAEVSTDSKG 949
            RGLPSSASWQDLKDHMRKAGDVCFAEVS DS+G
Sbjct: 121  RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 153


>ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
            gi|255636783|gb|ACU18725.1| unknown [Glycine max]
          Length = 267

 Score =  204 bits (518), Expect = 9e-50
 Identities = 104/153 (67%), Positives = 112/153 (73%)
 Frame = -2

Query: 1407 MSGRFSRTIYVGSLPLDIKEREIDDLFYKYGRIVDIELKVPPRPPCYCFVEFESSXXXXX 1228
            MSGRFSRTIYVG+LP DI+E EI+DLFYKYGRI+DIELKVPPRPPCYCFVEF+++     
Sbjct: 1    MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 1227 XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRHSEFRVIV 1048
                  GYNFDGCRLRVELAH                           GISRHSEFRVIV
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120

Query: 1047 RGLPSSASWQDLKDHMRKAGDVCFAEVSTDSKG 949
            RGLPSSASWQDLKDHMRKAGDVCFAEVS DS+G
Sbjct: 121  RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 153


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  199 bits (507), Expect = 2e-48
 Identities = 103/153 (67%), Positives = 111/153 (72%)
 Frame = -2

Query: 1407 MSGRFSRTIYVGSLPLDIKEREIDDLFYKYGRIVDIELKVPPRPPCYCFVEFESSXXXXX 1228
            MSGRFSRTIYVG+LP DI+E EI+DLFYKYGRI+D+ELK+PPRPPCYCFVEFE++     
Sbjct: 1    MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 1227 XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRHSEFRVIV 1048
                  GYNFDGCRLRVELAH                           GISRHSEFRVIV
Sbjct: 61   AIRGRDGYNFDGCRLRVELAH---GGRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIV 117

Query: 1047 RGLPSSASWQDLKDHMRKAGDVCFAEVSTDSKG 949
            RGLPSSASWQDLKDHMRKAGDVCFAEVS DS G
Sbjct: 118  RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDG 150


>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  199 bits (505), Expect = 3e-48
 Identities = 102/154 (66%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
 Frame = -2

Query: 1407 MSGRFSRTIYVGSLPLDIKEREIDDLFYKYGRIVDIELKVPPRPPCYCFVEFESSXXXXX 1228
            MSGRFSR+IYVG+LP DIKE E++DLFYKYGRI+DIELK+PPRPPCYCFVEFESS     
Sbjct: 1    MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60

Query: 1227 XXXXXXGYNFDGCRLRVELAH-XXXXXXXXXXXXXXXXXXXXXXXXXXXGISRHSEFRVI 1051
                  GYNFDGCRLRVELAH                            GISRHS++RVI
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120

Query: 1050 VRGLPSSASWQDLKDHMRKAGDVCFAEVSTDSKG 949
            +RGLPSSASWQDLKDHMRKAGDVCFAEVS DS+G
Sbjct: 121  IRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 154


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 264

 Score =  198 bits (503), Expect = 5e-48
 Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
 Frame = -2

Query: 1407 MSGRFSRTIYVGSLPLDIKEREIDDLFYKYGRIVDIELKVPPRPPCYCFVEFESSXXXXX 1228
            MSGRFSRTIYVG+LP DI+E E++DLFYKYGRI+DIELK+PPRPPCYCFVEFE++     
Sbjct: 1    MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 1227 XXXXXXGYNFDGCRLRVELAH-XXXXXXXXXXXXXXXXXXXXXXXXXXXGISRHSEFRVI 1051
                  GYNFDGCRLRVELAH                             ISRHSEFRVI
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120

Query: 1050 VRGLPSSASWQDLKDHMRKAGDVCFAEVSTDSKG 949
            VRGLPSSASWQDLKDHMRKAGDVCFAEVS DS G
Sbjct: 121  VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDG 154


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