BLASTX nr result

ID: Angelica23_contig00011563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011563
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33876.3| unnamed protein product [Vitis vinifera]              273   9e-71
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   273   9e-71
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   268   2e-69
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   264   3e-68
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   264   3e-68

>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  273 bits (697), Expect = 9e-71
 Identities = 149/236 (63%), Positives = 177/236 (75%), Gaps = 4/236 (1%)
 Frame = +2

Query: 245 NISRKSRFEVFATVQEEIQVDEKAENVQIA-QKRKLFVLNLPWSLTVADIKKLFGECGVV 421
           N + K  FE+ ++VQE I+V+ K E  Q   QKRKLFVLNLPWSL+V DIK LFGECG V
Sbjct: 27  NPTTKFSFELCSSVQE-IEVEAKPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTV 85

Query: 422 TDIEIIKQKSGKSRGFAFVTMASAEEAQAVIDKFNSYELSGRVITVEFAKRLKR---XXX 592
           TD+EIIKQK G+SRG+AFVTM S EEAQAV++KF+SYELSGR+I VEFAKR K+      
Sbjct: 86  TDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPP 145

Query: 593 XXXXXXXXGETRYKLYVSNLAWKVRANDLREFFAAKFKPVSARVVFNNPSGNSAGYGFVS 772
                   GETR+KLYVSNLAWKVR+  LREFF++ F PVS RVVF++PSG S GYGF S
Sbjct: 146 PPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFAS 205

Query: 773 FATKEEAETAISELNGKELLGRPITLKFSEKSIDGSESKEEHTPEVRTPEGQAGES 940
           FATKEEAE AIS L+GKEL+GRP+ LKFS K+ID S  ++E   E    EGQ  E+
Sbjct: 206 FATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDEKE---EGDISEGQPEEA 258


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  273 bits (697), Expect = 9e-71
 Identities = 149/236 (63%), Positives = 177/236 (75%), Gaps = 4/236 (1%)
 Frame = +2

Query: 245 NISRKSRFEVFATVQEEIQVDEKAENVQIA-QKRKLFVLNLPWSLTVADIKKLFGECGVV 421
           N + K  FE+ ++VQE I+V+ K E  Q   QKRKLFVLNLPWSL+V DIK LFGECG V
Sbjct: 57  NPTTKFSFELCSSVQE-IEVEAKPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTV 115

Query: 422 TDIEIIKQKSGKSRGFAFVTMASAEEAQAVIDKFNSYELSGRVITVEFAKRLKR---XXX 592
           TD+EIIKQK G+SRG+AFVTM S EEAQAV++KF+SYELSGR+I VEFAKR K+      
Sbjct: 116 TDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPP 175

Query: 593 XXXXXXXXGETRYKLYVSNLAWKVRANDLREFFAAKFKPVSARVVFNNPSGNSAGYGFVS 772
                   GETR+KLYVSNLAWKVR+  LREFF++ F PVS RVVF++PSG S GYGF S
Sbjct: 176 PPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFAS 235

Query: 773 FATKEEAETAISELNGKELLGRPITLKFSEKSIDGSESKEEHTPEVRTPEGQAGES 940
           FATKEEAE AIS L+GKEL+GRP+ LKFS K+ID S  ++E   E    EGQ  E+
Sbjct: 236 FATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDEKE---EGDISEGQPEEA 288


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  268 bits (686), Expect = 2e-69
 Identities = 137/226 (60%), Positives = 171/226 (75%)
 Frame = +2

Query: 251 SRKSRFEVFATVQEEIQVDEKAENVQIAQKRKLFVLNLPWSLTVADIKKLFGECGVVTDI 430
           +RK  FE F+T QE I + E+ +  +  QKRKL+V NLPWSL+V DIK LFG+CG VTD+
Sbjct: 56  ARKLSFERFSTAQE-IMIPEETQ--ETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDV 112

Query: 431 EIIKQKSGKSRGFAFVTMASAEEAQAVIDKFNSYELSGRVITVEFAKRLKRXXXXXXXXX 610
           EIIKQK+G+SRGFAFVT+AS EEAQA IDK +S+E+SGR+I VEFAKRLK          
Sbjct: 113 EIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGT 172

Query: 611 XXGETRYKLYVSNLAWKVRANDLREFFAAKFKPVSARVVFNNPSGNSAGYGFVSFATKEE 790
              ETR+K+YVSNLAWKVR+  LREFF+  F PVS+RVVF++P+G S+GYGFVSFAT+EE
Sbjct: 173 SARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREE 232

Query: 791 AETAISELNGKELLGRPITLKFSEKSIDGSESKEEHTPEVRTPEGQ 928
           AE AIS L+GKEL+GRP+ LKFS++  D SES+ +    V     Q
Sbjct: 233 AEAAISALDGKELMGRPLRLKFSDRKTDESESENQEEENVEDQSEQ 278


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  264 bits (675), Expect = 3e-68
 Identities = 133/229 (58%), Positives = 173/229 (75%), Gaps = 2/229 (0%)
 Frame = +2

Query: 242 FNISRK--SRFEVFATVQEEIQVDEKAENVQIAQKRKLFVLNLPWSLTVADIKKLFGECG 415
           FN SR       + + +QE    +   EN  + QKRKL++ NLPWSL+V DIK+LFG+CG
Sbjct: 59  FNSSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCG 118

Query: 416 VVTDIEIIKQKSGKSRGFAFVTMASAEEAQAVIDKFNSYELSGRVITVEFAKRLKRXXXX 595
            V+D+EIIKQK+G+SRGFAFVTMAS +EAQA I KF+S E+SGRVI VEFAKRLK+    
Sbjct: 119 TVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPP 178

Query: 596 XXXXXXXGETRYKLYVSNLAWKVRANDLREFFAAKFKPVSARVVFNNPSGNSAGYGFVSF 775
                  GET  KLYVSNLAWKVR+N+LR+FF+  F P++ARVVF++P+G SAGYGFVSF
Sbjct: 179 KPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSF 238

Query: 776 ATKEEAETAISELNGKELLGRPITLKFSEKSIDGSESKEEHTPEVRTPE 922
           AT+EEA+TA+S L GKEL+GRP+ LKFSE++++ +E+ +E   E +  E
Sbjct: 239 ATREEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEE 287


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  264 bits (675), Expect = 3e-68
 Identities = 133/229 (58%), Positives = 173/229 (75%), Gaps = 2/229 (0%)
 Frame = +2

Query: 242 FNISRK--SRFEVFATVQEEIQVDEKAENVQIAQKRKLFVLNLPWSLTVADIKKLFGECG 415
           FN SR       + + +QE    +   EN  + QKRKL++ NLPWSL+V DIK+LFG+CG
Sbjct: 53  FNSSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCG 112

Query: 416 VVTDIEIIKQKSGKSRGFAFVTMASAEEAQAVIDKFNSYELSGRVITVEFAKRLKRXXXX 595
            V+D+EIIKQK+G+SRGFAFVTMAS +EAQA I KF+S E+SGRVI VEFAKRLK+    
Sbjct: 113 TVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPP 172

Query: 596 XXXXXXXGETRYKLYVSNLAWKVRANDLREFFAAKFKPVSARVVFNNPSGNSAGYGFVSF 775
                  GET  KLYVSNLAWKVR+N+LR+FF+  F P++ARVVF++P+G SAGYGFVSF
Sbjct: 173 KPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSF 232

Query: 776 ATKEEAETAISELNGKELLGRPITLKFSEKSIDGSESKEEHTPEVRTPE 922
           AT+EEA+TA+S L GKEL+GRP+ LKFSE++++ +E+ +E   E +  E
Sbjct: 233 ATREEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEE 281


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