BLASTX nr result

ID: Angelica23_contig00011551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011551
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...   179   7e-43
ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...   179   7e-43
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]         177   3e-42
gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]         177   3e-42
ref|XP_002523537.1| structural constituent of ribosome, putative...   172   1e-40

>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  179 bits (455), Expect = 7e-43
 Identities = 83/120 (69%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
 Frame = -2

Query: 863 MPLYDCMLLLKRHITRPDVMDLVSRVGRHVYQRNGVLTELKSFGTRKLGYGIKKLDGRQY 684
           MPLYDCML+LK H+ +  +MDLV+RVG+HVY RNGV+T++KSFGT +LGYGIKKLDGR Y
Sbjct: 1   MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60

Query: 683 EGQLFQMTMMAPPSMNKELHYLNKEDRLLRWLMVKHRDIKIGLDYHIEED-TGKMELSKF 507
           +GQL Q+TMMA P++NKELHYLNKEDRLLRWL+VKHRDIK GL++  E+D  G+ + S+F
Sbjct: 61  QGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHRDIKFGLEFMDEDDEDGEFDFSEF 120


>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score =  179 bits (455), Expect = 7e-43
 Identities = 87/125 (69%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
 Frame = -2

Query: 863 MPLYDCMLLLKRHITRPDVMDLVSRVGRHVYQRNGVLTELKSFGTRKLGYGIKKLDGRQY 684
           MP YDCMLLLK H+ +  +MDLV+RVG+HVY+RNGVLT++KSFG  +LGYGIKKLDGR Y
Sbjct: 1   MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60

Query: 683 EGQLFQMTMMAPPSMNKELHYLNKEDRLLRWLMVKHRDIKIGLDYHIEEDTGKMELSKF- 507
           +GQL QM+MMA P+ NKELHYLNKEDRLLRWL+VKHR+ K GL++ + ED  + ELSKF 
Sbjct: 61  QGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEF-LNEDDVRSELSKFP 119

Query: 506 RSRLF 492
           RS LF
Sbjct: 120 RSTLF 124


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score =  177 bits (450), Expect = 3e-42
 Identities = 85/116 (73%), Positives = 100/116 (86%)
 Frame = -2

Query: 863 MPLYDCMLLLKRHITRPDVMDLVSRVGRHVYQRNGVLTELKSFGTRKLGYGIKKLDGRQY 684
           MPLYDCMLLLK H+ +  +MDLV+RVG+HVY RNGVLT++KSFGT +LGYGIKKLDGR Y
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 683 EGQLFQMTMMAPPSMNKELHYLNKEDRLLRWLMVKHRDIKIGLDYHIEEDTGKMEL 516
           +GQL QMTMMA P++NKELHYLNKEDRLLRWL+VKHRD   GL++ +EED  K EL
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTDGLEF-LEEDNDKEEL 115


>gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]
          Length = 163

 Score =  177 bits (449), Expect = 3e-42
 Identities = 85/116 (73%), Positives = 100/116 (86%)
 Frame = -2

Query: 863 MPLYDCMLLLKRHITRPDVMDLVSRVGRHVYQRNGVLTELKSFGTRKLGYGIKKLDGRQY 684
           MPLYDCMLLLK H+ +  +MDLV+RVG+HVY RNGVLT++KSFGT +LGYGIKKLDGR Y
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYGRNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 683 EGQLFQMTMMAPPSMNKELHYLNKEDRLLRWLMVKHRDIKIGLDYHIEEDTGKMEL 516
           +GQL QMTMMA P++NKELHYLNKEDRLLRWL+VKHRD   GL++ +EED  K EL
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTNGLEF-LEEDNDKEEL 115


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score =  172 bits (436), Expect = 1e-40
 Identities = 83/118 (70%), Positives = 101/118 (85%)
 Frame = -2

Query: 863 MPLYDCMLLLKRHITRPDVMDLVSRVGRHVYQRNGVLTELKSFGTRKLGYGIKKLDGRQY 684
           MPLYDCMLLLK HI +  V+DLV+RVG+HV  RNGVLT++KSFGT +LGYGIKK + R +
Sbjct: 1   MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60

Query: 683 EGQLFQMTMMAPPSMNKELHYLNKEDRLLRWLMVKHRDIKIGLDYHIEEDTGKMELSK 510
           +GQL QMTMMA P++NKELHYLNKEDRLLRWL+VKHRD K GLD+ ++E+ GK EL+K
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTKYGLDF-MDENDGKGELNK 117


Top