BLASTX nr result

ID: Angelica23_contig00011515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00011515
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   125   3e-26
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...   117   6e-24
ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|3554...   111   4e-22
ref|XP_003615322.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   110   9e-22
ref|XP_002300080.1| f-box family protein [Populus trichocarpa] g...   106   1e-20

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
            gi|357476013|ref|XP_003608292.1| F-box family protein
            [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
            family protein [Medicago truncatula]
            gi|355509347|gb|AES90489.1| F-box family protein
            [Medicago truncatula]
          Length = 489

 Score =  125 bits (314), Expect = 3e-26
 Identities = 115/396 (29%), Positives = 185/396 (46%), Gaps = 44/396 (11%)
 Frame = -1

Query: 1363 RKMGEVIQGEEEDRISRLPDELLSHVLTYVDSDLAVRTSVLSKRWVNLWTTLPCLNFKIA 1184
            RK  ++ QG EED +S LPD ++ H+L+++++  AVRT +LS RW N+W  +P L   + 
Sbjct: 17   RKTKKLKQGNEEDNLSDLPDCVILHILSFLNAKEAVRTCILSNRWKNVWKCVPTL---VL 73

Query: 1183 TPSDHDKYDFSCKFVTNFLKFRNQDSVMKTIKVNCIGSQDKYISTMCLDYSIAHNVEHLG 1004
              SD   +    KFV+  L  R+    ++ +    +GS + ++    ++Y+ +HNV+ LG
Sbjct: 74   HSSDFSTFKNFTKFVSKILSHRDGTIALQELDFERVGSIEPHLLKRIVNYAFSHNVQRLG 133

Query: 1003 MR-DGDYSH-APCLNSA-SIKTLHLS--------WCRYLQPMDDWVLPSLTSLYLRHVWF 857
            +   GD  H  PC++S  ++ +L LS        + R L P     LP+LTSL+L +  F
Sbjct: 134  ISVKGDICHILPCVSSCRTLTSLKLSVSPKGRHNYGRTLFP-KSLDLPALTSLHLGNFVF 192

Query: 856  -------GDHISGFENLKELTLSGCSECFWDFEEDFTINCPNLERLALAPDFSHCDMV-- 704
                    +  SGF  L  L +  C+       +D  I C   E L      +H   V  
Sbjct: 193  CASDKGRTEPFSGFNKLNSLVIDNCT------VKDAQILCILSETLVNLTMRNHSSDVYK 246

Query: 703  --VHARKLTYFEFRSGHVPQFSAGNGFPCIKEVDIDIELRDNDWGGLPVDDEWRMASAMS 530
              + A  L+ F F +G   Q   G+    +K+V+ID E+  N      V   W +  A  
Sbjct: 247  IELSAPSLSTFAF-TGTPYQKLCGSNLSSVKQVNIDAEMLSNYTEPPLVLLSWLLELA-- 303

Query: 529  NFIFMLDAVRETPVLKLSSETIQFLRRVPDLLEYQSSPLCNLKLLYLQ------GLN--- 377
                          L +S+ T+Q L  +PDLL+ + + LCNLK L +Q      GL+   
Sbjct: 304  ----------NIKSLTVSASTLQVLSLIPDLLKDKLTSLCNLKSLRVQLKPLSYGLSMTL 353

Query: 376  -------------ELPTRSTDYVINYLLSNSPGAEI 308
                         E  +   D ++++L+ NSP AE+
Sbjct: 354  RTAKLQKEVKAGQEPSSPIPDGIVDFLIQNSPSAEV 389


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
            F-box family-1 [Medicago truncatula]
          Length = 384

 Score =  117 bits (294), Expect = 6e-24
 Identities = 119/390 (30%), Positives = 174/390 (44%), Gaps = 46/390 (11%)
 Frame = -1

Query: 1336 EEEDRISRLPDELLSHVLTYVDSDLAVRTSVLSKRWVNLWTTLPCLNFKIATPSDHDKYD 1157
            ++EDRIS LPD L+ H+L+ +     V+TS+LSKRW NLW  LP L     T S      
Sbjct: 12   KKEDRISDLPDGLILHILSSLKVKQTVQTSILSKRWKNLWKHLPTLTL---TSSHFKTLK 68

Query: 1156 FSCKFVTNFLKFRNQDSVMKTIKVNCIGSQDKYISTMCLDYSIAHNVEHLGMRDG-DYSH 980
               KFVT  L  RN  + + T+K    G+ D  +    L+Y+++HNV  L ++   D   
Sbjct: 69   AFTKFVTPLLSLRNVPTSLHTLKFIYNGTIDPRLFEKILNYAVSHNVNELQLKGTCDIQQ 128

Query: 979  AP-------CLNSASIKTLHLSWCRYLQPMDDWVLPSLTSLYLRHVWF---GDHISGFEN 830
             P        L S   K    +  + +   +   LPS+TSLYL  V F    D  SGF  
Sbjct: 129  LPSCFFSCNTLTSLRFKVSPKTLSKRILFPNSLNLPSVTSLYLWLVSFRGGDDPFSGFTK 188

Query: 829  LKELTLSGCSECFWDF----EEDFTINCPNLERLALAPDF---SHCDMVVHARKLTYFEF 671
            L  L LS       DF    E++ +I+   L++L +   F   ++  + +    L+ F F
Sbjct: 189  LNSLMLS-------DFKILGEQNLSISSTTLDKLEIEMMFLFENYYKIELSTPNLSTFAF 241

Query: 670  --RSGHVPQFSAGNGFPCIKEVDIDIELRDNDWGGLPVDDEWRMASAMSNFIFMLDAVRE 497
                 H      G+    IK V ID       +  + ++ E    + +S     L  + +
Sbjct: 242  IGTPFHNKLLPCGSHLCSIKCVYID------TYADMCMNLEMDSPAILS----WLMELTD 291

Query: 496  TPVLKLSSETIQFLRRVPDLLEYQSSPLCNLKLL--------YLQGLNELPTRS------ 359
               L +SS T+Q L  VPDLL+ +   LCNLK L        Y     +LPTRS      
Sbjct: 292  IESLAISSTTLQVLSLVPDLLKVKLPSLCNLKSLRVKMKRISYSLFKEQLPTRSKEEFAK 351

Query: 358  ------------TDYVINYLLSNSPGAEIL 305
                         D ++++LL NSP AE+L
Sbjct: 352  LKESFKKGSSSIPDGIVDFLLQNSPSAEVL 381


>ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|355487963|gb|AES69166.1|
            F-box family-9 [Medicago truncatula]
          Length = 383

 Score =  111 bits (278), Expect = 4e-22
 Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 19/364 (5%)
 Frame = -1

Query: 1342 QGEEEDRISRLPDELLSHVLTYVDSDLAVRTSVLSKRWVNLWTTLPCLNFKIATPSDHDK 1163
            Q + EDR+S LP+ +L H+L+++D   AV+T +LSK W NLW  LP L         + K
Sbjct: 10   QEKNEDRLSVLPECILLHILSFLDPKEAVQTCILSKSWKNLWKYLPILKLTFRHFKKNPK 69

Query: 1162 YDFSCKFVTNFLKFRNQDSVMKTIKVNCIGSQDKYISTMCLDYSIAHNVEHLG------M 1001
              F+ KFV+  L  RN  + + T+  +C G  + +I    L Y+ +HNV+ LG      +
Sbjct: 70   -GFT-KFVSQILSLRNDSTALHTLDFHCRGRLELHILERILKYAFSHNVQRLGVDLSCNI 127

Query: 1000 RDGDYSHAPCLNSASIK-TLHLSWCRYLQPMDDWVLPSLTSLYLRHVWF--GD--HISGF 836
                 S   C    S+   +H      L P D   LP+LT+L L+   F  GD    + F
Sbjct: 128  PQFPLSFFSCHTLTSLDLRIHFFTLTNLFP-DSLDLPALTNLSLQGFLFCVGDDGRANPF 186

Query: 835  ENLKELTLSGCSECFWDFEEDFTINCPNLERLALAPDF--SHCDMVVHARKLTYFEFRSG 662
              L +L     + C    +++  I+   L  L L  DF  S     +    L  F +R G
Sbjct: 187  STLNKLNSLIINRCAVRDKQNLYISSATLANLKLINDFSSSRIKFQLSTPSLCTFAYR-G 245

Query: 661  HV---PQFSAGNGFPCIKEVDIDIELRDNDWGGLPVDDEWRMASAMSNFIFMLDAVRE-- 497
            HV     F++ +    IK V++D+ +      G  +      +++  N + +LD + E  
Sbjct: 246  HVGFQKLFTSNSNLSSIKHVNLDVSI------GFEM-----QSNSADNPLLLLDLLVELA 294

Query: 496  -TPVLKLSSETIQFLRRVPDLLEYQSSPLCNLKLLYLQGLNELPTRSTDYVINYLLSNSP 320
                L +SS T++ L  V DL + + + L NLK L    +N       D ++N+LL N+P
Sbjct: 295  NVESLTISSFTLEVLSLVHDLSKVEFNFLHNLKSL---KVNTYQQSIPDGILNFLLQNAP 351

Query: 319  GAEI 308
              ++
Sbjct: 352  STKL 355


>ref|XP_003615322.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355516657|gb|AES98280.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 359

 Score =  110 bits (275), Expect = 9e-22
 Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 19/364 (5%)
 Frame = -1

Query: 1342 QGEEEDRISRLPDELLSHVLTYVDSDLAVRTSVLSKRWVNLWTTLPCLNFKIATPSDHDK 1163
            Q  E+DR+S LPD L+  +L+++ +  AV+T +LSKR+ NLW  LP L  ++ + S    
Sbjct: 4    QRMEKDRLSELPDHLILQILSFLFAKQAVQTCILSKRFDNLWKRLPTL--RLTSSSFKHL 61

Query: 1162 YDFSCKFVTNFLKFRNQDSVMKTIKVNCIGSQDKYISTMCLDYSIAHNVEHLGMR-DGDY 986
             DF+ KFV+  L  R+  + + ++  +     + ++    L Y+++HNVE + +R   D 
Sbjct: 62   KDFT-KFVSKILSLRDHSTSLHSLTFHRHSLVEPHLLKRVLKYAVSHNVEQIYVRVKCDI 120

Query: 985  SHAP--CLNSASIKTLHLSWC-------RYLQPMDDWVLPSLTSLYLRHVWFGDHISG-- 839
             H P    +S ++ +L L+         R L P +   LPSLT+L L    F  +  G  
Sbjct: 121  QHFPPTLFSSHTLTSLKLALVHPKIYAKRALFPTNSINLPSLTTLCLHLFAFSVNNDGCA 180

Query: 838  --FENLKELTLSGCSECFWDFEEDFTINCPNLERLALA----PDFSHCDMVVHARKLTYF 677
              F    +L      +C  +  ++  I+   L +L +     P     ++ +    L  F
Sbjct: 181  EPFSIFNKLNTLVIDKCEVEDSQNLWISSATLVKLTIVTRDYPPDDCIEIELSTPNLCTF 240

Query: 676  EF-RSGHVPQFSAGNGFPCIKEVDIDIELRDNDWGGLPVDDEWRMASAMSNFIFMLDAVR 500
             F  S     + +      IK VDID+ L         +      +S + N++  L  ++
Sbjct: 241  TFIGSPFHKLYGSKTNLASIKHVDIDVNL---------MASSAEYSSFLLNWLIQLTNIK 291

Query: 499  ETPVLKLSSETIQFLRRVPDLLEYQSSPLCNLKLLYLQGLNELPTRSTDYVINYLLSNSP 320
                L LSS T+Q L  V DLL+ + S L NLK L +  + + P+   D ++++L+ NSP
Sbjct: 292  S---LTLSSPTLQVLFLVSDLLKVELSSLSNLKSLKV--MRKKPSSIPDGIVDFLIQNSP 346

Query: 319  GAEI 308
             A++
Sbjct: 347  SAKV 350


>ref|XP_002300080.1| f-box family protein [Populus trichocarpa]
            gi|222847338|gb|EEE84885.1| f-box family protein [Populus
            trichocarpa]
          Length = 351

 Score =  106 bits (265), Expect = 1e-20
 Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 17/341 (4%)
 Frame = -1

Query: 1369 IHRKMGEVIQGEEEDRISRLPDELLSHVLTYVDSDLAVRTSVLSKRWVNLWTTLPCLNFK 1190
            + ++  +V   + EDR+S LP+ ++ H+L+++D+  AV+TSVL+K W NLWT++  L+  
Sbjct: 1    MRKRSPKVCSSQHEDRLSNLPNHIIHHILSFLDAKYAVQTSVLAKGWRNLWTSVHVLHLN 60

Query: 1189 IATPSDHDKYDFSCKFVTNFLKFRNQDSVMKTIKVNCIGSQDKYISTMCLDYSIAHNVEH 1010
              +     ++    KFV   L   N +S   T      G  D Y+    + ++  H V H
Sbjct: 61   SNSFRRLGRFK---KFVVAVLNKLNHNSTAGTFLFTYRGRIDDYLKKRVIYFASFHGVGH 117

Query: 1009 ----LGMRDGDYSHAPCLNSASIKTLHLSWCRYLQPMDDWVLPSLTSLYLRHVWFG---- 854
                LG +    S A  LN  + KT+ L    +      +    LT+L+L+H  F     
Sbjct: 118  LVLDLGCKRPPVSQA-LLNCQTFKTIKLKNATF---TTSFGFSKLTTLHLKHCLFSLVSN 173

Query: 853  --DHISGFENLKELTLSGCSECFWDFEEDFTINCPNLERLALAPDF-------SHCDMVV 701
              D      NL  L+L GC   F  F+    I+ P L  + +   +         C + +
Sbjct: 174  CFDFSDCLPNLSSLSLLGCD--FTRFKV-LKISGPQLLNVTIRSMWYSYGGLSKGCKVEI 230

Query: 700  HARKLTYFEFRSGHVPQFSAGNGFPCIKEVDIDIELRDNDWGGLPVDDEWRMASAMSNFI 521
             A KLT+F ++  HV  FS  N  P ++  D+D+         L  ++E +    +  F 
Sbjct: 231  SAPKLTFFSYKESHVVDFSVIN-LPSLQHADVDV--------FLSYEEENKDIQCLLKFF 281

Query: 520  FMLDAVRETPVLKLSSETIQFLRRVPDLLEYQSSPLCNLKL 398
              L  V+      LS  TIQ L  VP  LE+Q SP   L L
Sbjct: 282  QGLYNVQSA---TLSYSTIQALNGVPG-LEHQQSPFSTLSL 318


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