BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010948
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     166   7e-39
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   157   2e-36
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   155   1e-35
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   155   1e-35
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   154   3e-35

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  166 bits (419), Expect = 7e-39
 Identities = 84/145 (57%), Positives = 105/145 (72%)
 Frame = -1

Query: 674 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 495
           M+   F+DI  + R+D DGKK+DKVSRIEARSEQ +M +QLDVN+E+ P+ VGD F MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 494 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVARLSFGGLQL 315
           A TL+ DG+  +    +G+ KSLADKFEYVMHG LYKIS+E SG N++     SFGGL +
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 314 MLKGDAIKMERFELHEKYFLCMRKV 240
           MLKGD      FEL ++ FL MRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  157 bits (397), Expect = 2e-36
 Identities = 77/145 (53%), Positives = 108/145 (74%)
 Frame = -1

Query: 674 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 495
           M+  +FDDI  VD  D  GKK+DKVSRIEA SEQ +M +QLDVN E  P++ G+ FRMVL
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 494 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVARLSFGGLQL 315
           A TL+ DG+ VT    +G++KSLADKF+YVM+G++YK+S+E SG +++ V   SFGGL +
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLM 120

Query: 314 MLKGDAIKMERFELHEKYFLCMRKV 240
           +LKGD   + + E++++ FL M+KV
Sbjct: 121 ILKGDPSNLNKLEVNKRLFLLMKKV 145


>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  155 bits (391), Expect = 1e-35
 Identities = 79/145 (54%), Positives = 104/145 (71%)
 Frame = -1

Query: 674 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 495
           M    F+DI KV  ++ DGKKYDKVSRIEARSE+L+M + LDVN+E+ P+  G+   MVL
Sbjct: 1   MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVL 60

Query: 494 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVARLSFGGLQL 315
           + TLN DGS VTS   +  +KSLADKFEY+MHG  YK+SDE SG++L+     SFGGLQ+
Sbjct: 61  SPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGSGSDLKVEVYASFGGLQM 120

Query: 314 MLKGDAIKMERFELHEKYFLCMRKV 240
           +LKGD I   +F + +  FL +RK+
Sbjct: 121 LLKGDPIHCAKFRVDQNMFLLLRKL 145


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  155 bits (391), Expect = 1e-35
 Identities = 80/145 (55%), Positives = 103/145 (71%)
 Frame = -1

Query: 674 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 495
           M N  F DI KV ++D DGKK+DKVSRIEA+SEQL+M +QLDVN+E+ P+  G+ F M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 494 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVARLSFGGLQL 315
           A TL+ DG+  T    +   KSLADKFEYVMHG LYKIS+E SG N++ V  +SFGGL +
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 314 MLKGDAIKMERFELHEKYFLCMRKV 240
           ML GD     + +L ++ FL +RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  154 bits (388), Expect = 3e-35
 Identities = 81/147 (55%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
 Frame = -1

Query: 677 RMINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMV 498
           +M+   F+DI  V RLD DGKK+D+VSRIEARSEQ +M +QLDV +E+ P+R GD F MV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 497 LADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKV-ARLSFGGL 321
           LA TLN DG+  T    +   K+LADKF+YVMHG LYKIS++ S     KV    SFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 320 QLMLKGDAIKMERFELHEKYFLCMRKV 240
            +MLKGD      FEL ++ FL +RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396