BLASTX nr result

ID: Angelica23_contig00010939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010939
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              191   1e-46
ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|1...   191   1e-46
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   191   2e-46
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   190   2e-46
gb|AFK42989.1| unknown [Lotus japonicus]                              189   7e-46

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  191 bits (485), Expect = 1e-46
 Identities = 95/100 (95%), Positives = 97/100 (97%)
 Frame = -3

Query: 656 H*STMKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLD 477
           H   MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTL+GKNPVTLD
Sbjct: 27  HSPKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLD 86

Query: 476 HLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 357
           HLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 87  HLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 126


>ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|118482633|gb|ABK93236.1|
           unknown [Populus trichocarpa]
           gi|118488779|gb|ABK96200.1| unknown [Populus
           trichocarpa] gi|222843847|gb|EEE81394.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  191 bits (485), Expect = 1e-46
 Identities = 94/98 (95%), Positives = 98/98 (100%)
 Frame = -3

Query: 644 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSV 465
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLT++GKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV 60

Query: 464 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAV 351
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRA+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAL 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  191 bits (484), Expect = 2e-46
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = -3

Query: 644 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSV 465
           MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTL+GKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 464 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 357
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  190 bits (483), Expect = 2e-46
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = -3

Query: 644 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSV 465
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTL+GKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 464 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 357
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  189 bits (479), Expect = 7e-46
 Identities = 94/95 (98%), Positives = 95/95 (100%)
 Frame = -3

Query: 644 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSV 465
           MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTL+GKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 464 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 360
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95


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