BLASTX nr result

ID: Angelica23_contig00010924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010924
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   285   8e-75
emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]   272   5e-71
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...   258   1e-66
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   254   1e-65
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...   253   3e-65

>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  285 bits (729), Expect = 8e-75
 Identities = 140/244 (57%), Positives = 174/244 (71%)
 Frame = -1

Query: 733 SMAEKTSDPEQALIPNLPNDISLQCIARIPRPHHPPLSLISKTFHSTLHSPEFFATRSLL 554
           S +  +S     LIPNLP+D++LQCIAR+PR  HP L L+ K++ S L+SP+FF+TRSLL
Sbjct: 10  SSSSSSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLL 69

Query: 553 NSTQQSLYLNIRVNSSFKWYTLNQQPHLAKNPNFLTPLNNIKVQPVGSCFAVLGFKIYVI 374
           N  Q SLYL +RVN + KW+ LNQ      NP  L  L       +GS FA +G KI+V+
Sbjct: 70  NCMQHSLYLIVRVNCTLKWFVLNQ------NPRILASLPPNPSPAIGSAFAAIGSKIFVL 123

Query: 373 GGSVNEIATNDVWVFDCRFGKWEIGAKMRVCREFAAAGVVNGSIYVLGGCVGDNFVKSSN 194
           GGSVN++A+  V VFDCRFG WE+G +MRV REFAAAGVV   IYV+GGC+ D + KS+N
Sbjct: 124 GGSVNDVASPTVQVFDCRFGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLVDTWAKSAN 183

Query: 193 WAEVYDPGVGVWKAVESPVEVRDKWMHASCVLNGRIYAMADRGGVVYDVGNGEWGRSVPK 14
           WAEV+DP  G W  VESPVEVR+KWMHAS V+  +IYAMADRGGVV++ G  EWG  V  
Sbjct: 184 WAEVFDPAAGRWAGVESPVEVREKWMHASAVVEEKIYAMADRGGVVFEPGTAEWG-GVST 242

Query: 13  RLDL 2
            LDL
Sbjct: 243 ELDL 246


>emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]
          Length = 285

 Score =  272 bits (696), Expect = 5e-71
 Identities = 133/226 (58%), Positives = 164/226 (72%)
 Frame = -1

Query: 679 NDISLQCIARIPRPHHPPLSLISKTFHSTLHSPEFFATRSLLNSTQQSLYLNIRVNSSFK 500
           ND++LQCIAR+PR  HP L L+ K++ S L+SP+FF+TRSLLN  Q SLYL +RVN + K
Sbjct: 41  NDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLK 100

Query: 499 WYTLNQQPHLAKNPNFLTPLNNIKVQPVGSCFAVLGFKIYVIGGSVNEIATNDVWVFDCR 320
           W+ LNQ      NP  L  L       +GS FA +G KI+V+GGSVN++A+  V VFDCR
Sbjct: 101 WFVLNQ------NPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVASPTVQVFDCR 154

Query: 319 FGKWEIGAKMRVCREFAAAGVVNGSIYVLGGCVGDNFVKSSNWAEVYDPGVGVWKAVESP 140
           FG WE+G +MRV REFAAAGVV   IYV+GGC+ D + KS+NWAEV+DP  G W  VESP
Sbjct: 155 FGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLVDTWAKSANWAEVFDPAAGRWAGVESP 214

Query: 139 VEVRDKWMHASCVLNGRIYAMADRGGVVYDVGNGEWGRSVPKRLDL 2
           VEVR+KWMHAS V+  +IYAMADRGGVV++ G  EWG  V   LDL
Sbjct: 215 VEVREKWMHASAVVEEKIYAMADRGGVVFEPGTAEWG-GVSTELDL 259


>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score =  258 bits (659), Expect = 1e-66
 Identities = 137/246 (55%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
 Frame = -1

Query: 727 AEKTSDPEQALIPNLPNDISLQCIARIPRPHHPPLSLISKTFHSTLHSPEFFATRSLLNS 548
           A  TS     LIP LP+DISL  +ARIPR HHP LSL+SK+FHS   SP F+ATRSLLN 
Sbjct: 9   ATTTSSNLPLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNF 68

Query: 547 TQQSLYLNIR--VNSSFKWYTLNQQPHLAKNP-NFLTPLNNIKVQPVGSCFAVLGFKIYV 377
           +Q  LYL+IR  + SS +W+TL Q     KNP NFL  L       VGS    LG KIYV
Sbjct: 69  SQPFLYLSIRFAITSSLRWFTLYQNSPNPKNPPNFLVQLLPTPSPLVGSATVSLGHKIYV 128

Query: 376 IGGSVNEIATNDVWVFDCRFGKWEIGAKMRVCREFAAAGVVNGSIYVLGGCVGDNFVKSS 197
           IGG +N+I ++ VW  DCRF  WE+  KM + REFAAAGVVN  IYV+GGCV D F +S 
Sbjct: 129 IGGCLNDIPSSHVWTLDCRFHMWELSPKMSISREFAAAGVVNDKIYVIGGCVVDTFARSK 188

Query: 196 NWAEVYDPGVGVWKAVESPVE--VRDKWMHASCVLNGRIYAMADRGGVVYDVGNGEWGRS 23
            WAEV+DP +  W+A++S  E  +R+KWMHAS V+N ++YAMADR GVVYD  N +W  S
Sbjct: 189 YWAEVFDPNIETWEAIDSVREHLLREKWMHASAVINEKVYAMADRNGVVYDPRNRKW-ES 247

Query: 22  VPKRLD 5
           V   LD
Sbjct: 248 VGVELD 253


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score =  254 bits (650), Expect = 1e-65
 Identities = 132/243 (54%), Positives = 167/243 (68%), Gaps = 2/243 (0%)
 Frame = -1

Query: 727 AEKTSDPEQALIPNLPNDISLQCIARIPRPHHPPLSLISKTFHSTLHSPEFFATRSLLNS 548
           +E++  P   LIP LPND++L C+ARIPR HHP LSL+SK   S L+SP  F TRSLL  
Sbjct: 8   SEESESPNN-LIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQC 66

Query: 547 TQQSLYLNIRV-NSSFKWYTLNQQPHLAKNPN-FLTPLNNIKVQPVGSCFAVLGFKIYVI 374
           TQ  LYL +R  +SS +W+TL++      NPN  L PL  I    VGS +AVLG  IYV+
Sbjct: 67  TQPLLYLTLRSRDSSLQWFTLHRT-----NPNPLLAPLPPIPSPAVGSAYAVLGPTIYVL 121

Query: 373 GGSVNEIATNDVWVFDCRFGKWEIGAKMRVCREFAAAGVVNGSIYVLGGCVGDNFVKSSN 194
           GGS+ ++ ++ VW+ DCRF +W  G  MRV REFAAAGV++G IYVLGGCV D + +S+N
Sbjct: 122 GGSIQDVPSSHVWLLDCRFHRWLRGPPMRVAREFAAAGVLHGKIYVLGGCVADTWSRSAN 181

Query: 193 WAEVYDPGVGVWKAVESPVEVRDKWMHASCVLNGRIYAMADRGGVVYDVGNGEWGRSVPK 14
           WAEV DP  G W+ V SP EVR+KWMHAS V+  RIYAMADRGG+ ++  +  W  SV  
Sbjct: 182 WAEVLDPASGRWERVASPTEVREKWMHASAVVGDRIYAMADRGGIAFEPRSCAW-ESVGG 240

Query: 13  RLD 5
            LD
Sbjct: 241 ELD 243


>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
           gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
           SKIP6 [Medicago truncatula]
          Length = 356

 Score =  253 bits (647), Expect = 3e-65
 Identities = 123/240 (51%), Positives = 169/240 (70%), Gaps = 1/240 (0%)
 Frame = -1

Query: 718 TSDPEQALIPNLPNDISLQCIARIPRPHHPPLSLISKTFHSTLHSPEFFATRSLLNSTQQ 539
           T +    LIP+LP+D+++ C+AR+PR HH  L+L+SK  HS L S  FF  RSL+ STQ 
Sbjct: 2   TKNQNSNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQH 61

Query: 538 SLYLNIRVNS-SFKWYTLNQQPHLAKNPNFLTPLNNIKVQPVGSCFAVLGFKIYVIGGSV 362
            LYL++R  S S +++TL+       N + L PL  +    +GS +AV+  KIY+IGGSV
Sbjct: 62  ILYLSLRTRSTSLQFFTLH-------NNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSV 114

Query: 361 NEIATNDVWVFDCRFGKWEIGAKMRVCREFAAAGVVNGSIYVLGGCVGDNFVKSSNWAEV 182
           N++ +  VW+ DCRF +W  G  MRV REFAAAGV++G IYV+GGCV DNF +S+NW+EV
Sbjct: 115 NDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEV 174

Query: 181 YDPGVGVWKAVESPVEVRDKWMHASCVLNGRIYAMADRGGVVYDVGNGEWGRSVPKRLDL 2
           +DP    W++V SP E+R+KWMHAS V++G++YAMADRGGV +D  NG W  SV + LD+
Sbjct: 175 FDPVNNRWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVSFDPYNGAW-ESVGRELDI 233


Top