BLASTX nr result

ID: Angelica23_contig00010917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010917
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kD...   123   2e-26
ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ...   116   2e-24
ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002864762.1| hypothetical protein ARALYDRAFT_496370 [Arab...   108   6e-22
ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22

>ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kDa protein [Vitis
           vinifera] gi|147791928|emb|CAN67894.1| hypothetical
           protein VITISV_040392 [Vitis vinifera]
           gi|297734504|emb|CBI15751.3| unnamed protein product
           [Vitis vinifera]
          Length = 595

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = +3

Query: 3   DRKPEEVAFAEECEIKSAIFRAERCFYLAKSYSLAGKRTEAYSLYRRACSLADTALKRLQ 182
           DRKPEEV+F EEC +KS  FRAERCFYLAKSYSLAGKRTEAY+LY  A SLAD AL++LQ
Sbjct: 406 DRKPEEVSFTEECALKSLAFRAERCFYLAKSYSLAGKRTEAYALYSHARSLADDALQKLQ 465

Query: 183 SSTTADQEVLKDLKVLYNESRSNS 254
           +S+  DQ ++K LK+LYN+ RSNS
Sbjct: 466 ASSNNDQTLIKGLKMLYNDCRSNS 489


>ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
           communis] gi|223550210|gb|EEF51697.1| Signal recognition
           particle 68 kDa protein, putative [Ricinus communis]
          Length = 594

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/84 (66%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   DRKPEEVAFAEECEIKSAIFRAERCFYLAKSYSLAGKRTEAYSLYRRACSLADTALKRLQ 182
           D KPEEVAF+E+C ++S  FRA+RCFYLAKSYSLAGKRTEAYSLY RA SL++ AL++ Q
Sbjct: 405 DTKPEEVAFSEDCALRSLAFRAQRCFYLAKSYSLAGKRTEAYSLYCRARSLSENALQKFQ 464

Query: 183 SSTTADQEVLKDLKVLYNESRSNS 254
           S    D+ ++K+LK LYNE RSNS
Sbjct: 465 SLNNTDEIMVKELKTLYNECRSNS 488


>ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|222859441|gb|EEE96988.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   DRKPEEVAFAEECEIKSAIFRAERCFYLAKSYSLAGKRTEAYSLYRRACSLADTALKRLQ 182
           DRKPEEVAF+E+C ++S  FRA+RCFYLAKSYS AGKRTEAY+LY  A SLA+ ALK+ Q
Sbjct: 413 DRKPEEVAFSEDCVLRSMAFRAQRCFYLAKSYSSAGKRTEAYALYCHARSLAENALKKFQ 472

Query: 183 SSTTADQEVLKDLKVLYNESRSNS 254
           +    D+ + K+LK LYNE R+NS
Sbjct: 473 TMMDTDEAMTKELKTLYNECRANS 496


>ref|XP_002864762.1| hypothetical protein ARALYDRAFT_496370 [Arabidopsis lyrata subsp.
           lyrata] gi|297310597|gb|EFH41021.1| hypothetical protein
           ARALYDRAFT_496370 [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   DRKPEEVAFAEECEIKSAIFRAERCFYLAKSYSLAGKRTEAYSLYRRACSLADTALKRLQ 182
           DRKPEE+AF EEC+ KS  FRAERCFYLAKSYSLAGKR EA++LY RA SLA+ AL + Q
Sbjct: 413 DRKPEEIAFEEECQRKSLAFRAERCFYLAKSYSLAGKRAEAFALYSRARSLAEDALNKFQ 472

Query: 183 SSTTADQEVLKDLKVLYNESRSNS 254
           S    D+  +++LK L  E R+NS
Sbjct: 473 SIAKKDEGTIQELKTLIKECRANS 496


>ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|222869298|gb|EEF06429.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   DRKPEEVAFAEECEIKSAIFRAERCFYLAKSYSLAGKRTEAYSLYRRACSLADTALKRLQ 182
           DRKPEEV F E+C+++S  FRA+RCFYLAKSYS AGKR EAY LY  A SLA+ ALK+ Q
Sbjct: 412 DRKPEEVEFTEDCDLRSTAFRAQRCFYLAKSYSSAGKRAEAYVLYCHARSLAENALKKFQ 471

Query: 183 SSTTADQEVLKDLKVLYNESRSNS 254
           + T+ D+  +K+L+ L NE R+NS
Sbjct: 472 TVTSTDEVTIKELRTLNNECRANS 495


Top