BLASTX nr result

ID: Angelica23_contig00010887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010887
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34998.1| unknown [Lotus japonicus]                              193   4e-47
dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|...   193   4e-47
gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana t...   191   1e-46
ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform...   191   2e-46
ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [C...   190   3e-46

>gb|AFK34998.1| unknown [Lotus japonicus]
          Length = 116

 Score =  193 bits (490), Expect = 4e-47
 Identities = 92/106 (86%), Positives = 100/106 (94%)
 Frame = +3

Query: 96  LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 275
           +NAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 10  MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 69

Query: 276 MLQQVKRLVVIETEEMYKARKQKIGDHQAIRPPIVVNHFPTPASGS 413
           MLQQVKRLVVIETEEMYKARKQK   H+A+RPP+V+NH P+ A+G+
Sbjct: 70  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGT 115


>dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|AFK47535.1| unknown
           [Lotus japonicus]
          Length = 107

 Score =  193 bits (490), Expect = 4e-47
 Identities = 92/106 (86%), Positives = 100/106 (94%)
 Frame = +3

Query: 96  LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 275
           +NAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60

Query: 276 MLQQVKRLVVIETEEMYKARKQKIGDHQAIRPPIVVNHFPTPASGS 413
           MLQQVKRLVVIETEEMYKARKQK   H+A+RPP+V+NH P+ A+G+
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGT 106


>gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana tabacum]
          Length = 108

 Score =  191 bits (486), Expect = 1e-46
 Identities = 89/108 (82%), Positives = 100/108 (92%)
 Frame = +3

Query: 96  LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 275
           ++A+ A+KAC PI+WSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MSAYNAFKACAPISWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 276 MLQQVKRLVVIETEEMYKARKQKIGDHQAIRPPIVVNHFPTPASGSSQ 419
           MLQQVKRLVVIETEEMYKARK+K+ DH+A+RPP+VVNH   PA+ S Q
Sbjct: 61  MLQQVKRLVVIETEEMYKARKEKLSDHKALRPPLVVNHHAAPAADSVQ 108


>ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera]
           gi|359474731|ref|XP_003631524.1| PREDICTED: 50S
           ribosomal protein L30 isoform 2 [Vitis vinifera]
           gi|359474733|ref|XP_003631525.1| PREDICTED: 50S
           ribosomal protein L30 isoform 3 [Vitis vinifera]
           gi|296085477|emb|CBI29209.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  191 bits (485), Expect = 2e-46
 Identities = 92/108 (85%), Positives = 101/108 (93%), Gaps = 1/108 (0%)
 Frame = +3

Query: 96  LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 275
           +NAFKA+KACVP+AWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 276 MLQQVKRLVVIETEEMYKARKQKIGDHQAIRPPIVVNH-FPTPASGSS 416
           MLQQVKRLVVIETEEMYKARK K  +H+A+RPP+V+NH  P PA+ SS
Sbjct: 61  MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDSS 108


>ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus]
           gi|449522520|ref|XP_004168274.1| PREDICTED: 50S
           ribosomal protein L30-like [Cucumis sativus]
          Length = 108

 Score =  190 bits (483), Expect = 3e-46
 Identities = 88/107 (82%), Positives = 100/107 (93%)
 Frame = +3

Query: 96  LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 275
           +NAFKA+KA VPIAWS NLYITLVRG+PGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 276 MLQQVKRLVVIETEEMYKARKQKIGDHQAIRPPIVVNHFPTPASGSS 416
           M+QQVKRLVV+ETEEMYKARKQK+  H+A+RPP+V+NH P P+S S+
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASA 107


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