BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010876
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   102   2e-19
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
gb|ABK92467.1| unknown [Populus trichocarpa]                           86   2e-14
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...    80   9e-13
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi...    79   3e-12

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score =  102 bits (253), Expect = 2e-19
 Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +3

Query: 690 LGILGHPRVCCQ*MCLSLSMNVP*SFIHASCETQISD-----KKVKTQFRNKVLVNDDCI 854
           L +L HP    +    +L M VP S  H  C+T+ SD       +KT FR KV++NDDCI
Sbjct: 452 LHLLSHPTWHSRTSSWTLLMKVPESSFHPGCQTRTSDIHNVKNIIKTHFRTKVVINDDCI 511

Query: 855 KVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 974
            VEG+GAPNVVGLFKG+SE +CS+N+Y   +AD+P++LLQQ A
Sbjct: 512 NVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLADIPVILLQQVA 554



 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 322 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVFISLL 456
           + ++VFD VNREAFN S GVNVTG  ENYL+LN  QGASVF+SL+
Sbjct: 286 FDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASVFMSLV 330


>ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|222838847|gb|EEE77198.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
 Frame = +3

Query: 690 LGILGHPRVCCQ*MCLSLSMNVP*SFIHASCETQISDKK-----VKTQFRNKVLVNDDCI 854
           L ++ HP    +    ++ M +P S +HAS +T+  D +     VK++F  KV+V+DDCI
Sbjct: 460 LHLISHPTWHSRSSAWTIFMKIPPSILHASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCI 519

Query: 855 KVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 974
            +E EGAPNVVGLFK +S+  CS NKY   + DLP+++LQQ A
Sbjct: 520 NIEAEGAPNVVGLFKDSSDDKCSTNKYDCNLDDLPVIILQQVA 562


>gb|ABK92467.1| unknown [Populus trichocarpa]
          Length = 366

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
 Frame = +3

Query: 690 LGILGHPRVCCQ*MCLSLSMNVP*SFIHASCETQISDKK-----VKTQFRNKVLVNDDCI 854
           L ++ HP    +    ++ M +P S +HAS +T+  D +     VK++F  KV+V+DDCI
Sbjct: 159 LHLISHPTWHSRSSAWTIFMKIPPSILHASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCI 218

Query: 855 KVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 974
            +E EGAPNVVGLFK +S+  CS NKY   + DLP+++LQQ A
Sbjct: 219 NIEAEGAPNVVGLFKDSSDDKCSTNKYDCNLDDLPVIILQQVA 261


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Cucumis sativus]
           gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like [Cucumis
           sativus]
          Length = 662

 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
 Frame = +3

Query: 690 LGILGHPRVCCQ*MCLSLSMNVP*SFIHA-SCETQISD-----KKVKTQFRNKVLVNDDC 851
           L ++ HP    +    +  M VP S +H  S + + SD        KTQF  KV+VNDDC
Sbjct: 452 LQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDC 511

Query: 852 IKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 974
           I +EGEGAPNVVGLF G S+ I S N+Y   +ADLP+++L Q A
Sbjct: 512 ITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVA 555



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +1

Query: 322 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVFISLL 456
           + ++VFD VN+EAFNPS+G+NVTG  ENYL+L+  QG SVFISL+
Sbjct: 288 FSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLV 332


>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
           gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           17 gi|332005425|gb|AED92808.1| RNA polymerase II
           transcription mediator [Arabidopsis thaliana]
          Length = 653

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
 Frame = +3

Query: 690 LGILGHPRVCCQ*MCLSLSMNVP*SFI-HASCETQISDKK--VKTQFRNKVLVNDDCIKV 860
           L ++ HP    +    ++ M VP S I     ETQ  D K  +KTQFR KV+V DDCI V
Sbjct: 450 LHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKRNLKTQFRTKVVVKDDCISV 509

Query: 861 EGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 974
           E E  PNVVGL K +S  + SINKY   VADLP+++LQQ A
Sbjct: 510 EAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQQVA 550