BLASTX nr result

ID: Angelica23_contig00010814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010814
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   209   4e-52
ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...   205   7e-51
ref|XP_002531336.1| RNA binding protein, putative [Ricinus commu...   198   9e-49
ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...   196   5e-48
ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein ...   195   1e-47

>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  209 bits (533), Expect = 4e-52
 Identities = 107/143 (74%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
 Frame = -1

Query: 726 MAYTFGAFRRILGSSSTNLPSPHLSLLARLNSTLTTPKLFISGLSRLTTDEKLKEAFAPF 547
           MA+ FG F R+L  S + L S H + + RLNSTLT+PKLFISGLSRLTTDEKL EAF+PF
Sbjct: 1   MAFFFG-FHRLLRHSQSPLVSSHFTSI-RLNSTLTSPKLFISGLSRLTTDEKLTEAFSPF 58

Query: 546 GNLVEAKVIVDRACGRSKGFGFVTYDTIEEAEKAREGMNAKFLDGWVIFVDPAKPRENKP 367
           G L+EAKVI DR  GRSKGF FV+Y TIEEAEKAREGMNAKFLDGWVIFVDPAKPRE +P
Sbjct: 59  GQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRP 118

Query: 366 PQQEQ-QPSNTGYTTNKTIGWCG 301
           PQQ Q QPS TG+T NKT+GWCG
Sbjct: 119 PQQSQSQPSQTGFTVNKTVGWCG 141


>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  205 bits (522), Expect = 7e-51
 Identities = 104/137 (75%), Positives = 115/137 (83%), Gaps = 1/137 (0%)
 Frame = -1

Query: 708 AFRRILGSSSTNLPSPHLSLLARLNSTLTTPKLFISGLSRLTTDEKLKEAFAPFGNLVEA 529
           +FRR+L  SST L S      AR NST+T+PKLF+SGLSRLTTDEKLKEAF+PFG L+EA
Sbjct: 6   SFRRVLTGSSTILQSQFSP--ARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQLLEA 63

Query: 528 KVIVDRACGRSKGFGFVTYDTIEEAEKAREGMNAKFLDGWVIFVDPAKPRENK-PPQQEQ 352
           KVI DR  GRSKGFGFVTY T+EEAEKAREGMNAKFLDGWVIFVDPAKPRE + PPQQE 
Sbjct: 64  KVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQQEP 123

Query: 351 QPSNTGYTTNKTIGWCG 301
           + S TG+ TNKTIGWCG
Sbjct: 124 ESSETGFRTNKTIGWCG 140


>ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
           gi|223529058|gb|EEF31043.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 144

 Score =  198 bits (504), Expect = 9e-49
 Identities = 98/137 (71%), Positives = 112/137 (81%), Gaps = 3/137 (2%)
 Frame = -1

Query: 702 RRILGSSSTNLPSPHLSLLARLNSTLTTPKLFISGLSRLTTDEKLKEAFAPFGNLVEAKV 523
           RR L  SS++LP+     L R +STLT P+LF+SGLSRLTTDEKLKEAF+PFG LV+AKV
Sbjct: 8   RRGLFGSSSSLPASPALFLTRFHSTLTCPRLFVSGLSRLTTDEKLKEAFSPFGQLVDAKV 67

Query: 522 IVDRACGRSKGFGFVTYDTIEEAEKAREGMNAKFLDGWVIFVDPAKPRENK---PPQQEQ 352
           I+DRA GRSKGFGF+TY TIEEAEKAREGMNAKFLDGWVIFVDPAKPRE +   PP  + 
Sbjct: 68  IIDRASGRSKGFGFITYATIEEAEKAREGMNAKFLDGWVIFVDPAKPREQRLPPPPPPQP 127

Query: 351 QPSNTGYTTNKTIGWCG 301
           + S TGY  N+TIGWCG
Sbjct: 128 ETSETGYKINRTIGWCG 144


>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score =  196 bits (498), Expect = 5e-48
 Identities = 95/115 (82%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = -1

Query: 642 RLNSTLTTPKLFISGLSRLTTDEKLKEAFAPFGNLVEAKVIVDRACGRSKGFGFVTYDTI 463
           RL+STLT+PKLF+SGL RLT DEKLKEAF+ FG LVEAKVI+DRA GRSKGF FVTY TI
Sbjct: 25  RLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTI 84

Query: 462 EEAEKAREGMNAKFLDGWVIFVDPAKPRENKPPQQEQ-QPSNTGYTTNKTIGWCG 301
           EEAEKAREGMNAKFLDGWVIFVDPAKPRE +PPQQ Q QPS TG+T NKT+GWCG
Sbjct: 85  EEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSETGFTVNKTVGWCG 139


>ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 139

 Score =  195 bits (495), Expect = 1e-47
 Identities = 101/143 (70%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
 Frame = -1

Query: 726 MAYTFGAFRRILGSSSTNLPSPHLSLLARLNSTLTTPKLFISGLSRLTTDEKLKEAFAPF 547
           MA+ +GA R +     T L   H + + RL+STLT+PKLF+SGLSRLT DE LKEAF+ F
Sbjct: 1   MAFLYGAQRLL---RHTPLVHSHYASI-RLSSTLTSPKLFVSGLSRLTKDENLKEAFSSF 56

Query: 546 GNLVEAKVIVDRACGRSKGFGFVTYDTIEEAEKAREGMNAKFLDGWVIFVDPAKPRENKP 367
           G LVEAKVI DRA GRSKGF FVTY TIEEAE+AREGMNAKFLDGWVIFVDPAKPRE +P
Sbjct: 57  GQLVEAKVITDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIFVDPAKPREPRP 116

Query: 366 PQQEQ-QPSNTGYTTNKTIGWCG 301
           PQQ Q QPS  G+T NKT+GWCG
Sbjct: 117 PQQSQSQPSEIGFTVNKTVGWCG 139


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