BLASTX nr result

ID: Angelica23_contig00010596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010596
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...   125   7e-27
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   117   1e-24
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   111   1e-22
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   110   3e-22
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...   105   8e-21

>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  125 bits (314), Expect = 7e-27
 Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 11/107 (10%)
 Frame = +3

Query: 84  YMSERTVRFEVFKLDKSGEKWIKVENLGDRIIFLGDNCAFSALASDFVGCKGNCILFTN- 260
           YMSERTVRF+VFKLDK  + WI+V++LGDR++FLGD+  FSA  SD  GCKGNCI F + 
Sbjct: 222 YMSERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDN 281

Query: 261 ----------SNKVEDGVLKSRGISVFDLESGSIGPLGNYPGISELF 371
                     +N  +DGVL  R I VFDLE+G IGPLGNYP  +++F
Sbjct: 282 FFYSRDENLRANGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMF 328


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  117 bits (294), Expect = 1e-24
 Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
 Frame = +3

Query: 3   ELFMVDKFLSXXXXXXXXXXXXXXFDC--YMSERTVRFEVFKLDKSGEKWIKVENLGDRI 176
           +L +VD +LS               D   YMSERTVRF+VFKL++ G+ WI+V+NL DR+
Sbjct: 254 DLLLVDMYLSIDTDEGLSIGNDVVQDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRV 313

Query: 177 IFLGDNCAFSALASDFVGCKGNCILFTNS-----NKVEDGVLKSRGISVFDLESGSIGPL 341
           +FLGD+  FSA AS+  GCKGNCI F ++      + +DG +  R I VF+LESG IGPL
Sbjct: 314 LFLGDDSTFSASASELSGCKGNCIFFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPL 373

Query: 342 GNYPGISELF 371
            N+P  S++F
Sbjct: 374 RNFPDYSKMF 383


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  111 bits (277), Expect = 1e-22
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
 Frame = +3

Query: 3   ELFMVDKFLSXXXXXXXXXXXXXXFDC--YMSERTVRFEVFKLDKSGEKWIKVENLGDRI 176
           +L +VD +LS               D   YMSERTV F+VFKL++ G+ WI+V +L DR+
Sbjct: 254 DLLLVDMYLSIDSDEGLSIGHDVVQDLVQYMSERTVWFKVFKLNEEGKCWIEVNDLEDRV 313

Query: 177 IFLGDNCAFSALASDFVGCKGNCILFTNS-----NKVEDGVLKSRGISVFDLESGSIGPL 341
           +FLGD+  FSA AS+  GCKGNCI F +       + +DG L  R I VF+LESG IGPL
Sbjct: 314 LFLGDDLTFSASASELSGCKGNCIFFNDDFFYSRGEGDDGSLFGRDIGVFELESGCIGPL 373

Query: 342 GNYPGISELF 371
            N+P  S++F
Sbjct: 374 RNFPDNSKMF 383


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/98 (54%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = +3

Query: 84  YMSERTVRFEVFKLDKSGEKWIKVENLGDRIIFLGDNCAFSALASDFVGCKGNCILFTN- 260
           +M ER + F+VF+LD+  +KW+++E+LGDR++FLGD+ +FSA ASDF GCKGN I FTN 
Sbjct: 274 WMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNI 333

Query: 261 ---SNKVEDGVLKSRGISVFDLESGSIGPLGNYPGISE 365
              S+  ED   +S  I VFDL+SGSIGPL +Y   S+
Sbjct: 334 SFFSDAEEDDASRSGTIGVFDLDSGSIGPLSSYANYSK 371


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score =  105 bits (262), Expect = 8e-21
 Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
 Frame = +3

Query: 96  RTVRFEVFKLDKSGEKWIKVENLGDRIIFLGDNCAFSALASDFVGCKGNCILFTNS---- 263
           R VRF+VFKL++ G  W++VENLGDRI+FLG+   FSA+AS+F GC+GNCI +TNS    
Sbjct: 267 RAVRFKVFKLNQIGHMWVEVENLGDRILFLGEKSTFSAVASEFCGCEGNCIYYTNSFFFP 326

Query: 264 NKVEDGVLKSRGISVFDLESGSIGPLGNYPGISEL 368
           N  ED      GI +F+LE+G++GPL ++P  S++
Sbjct: 327 NDQEDDAY--TGIGIFNLENGNLGPLSSFPNYSKV 359


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