BLASTX nr result

ID: Angelica23_contig00010552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010552
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...    93   2e-17
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AFK39402.1| unknown [Medicago truncatula]                           82   6e-14
ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arab...    81   8e-14
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...    81   8e-14

>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/57 (80%), Positives = 50/57 (87%)
 Frame = -1

Query: 469 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPRARFDDGGMPIARGPPEPAA 299
           GFGFVTFASE+EA KA TEM+GK+LNGR IFVD+AKPRA F  GGMPIARGPPEP A
Sbjct: 76  GFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAKPRADF-GGGMPIARGPPEPTA 131


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = -1

Query: 469 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPRARFDDGGMPIARGPPEPAASQ 293
           GFGFVT+ASEDEA KA+ EMNGK LNGRVI+VD+AK +  F  GG+PIARGPPEP  S+
Sbjct: 81  GFGFVTYASEDEAQKALDEMNGKALNGRVIYVDYAKLKTNF-GGGIPIARGPPEPTTSE 138


>gb|AFK39402.1| unknown [Medicago truncatula]
          Length = 140

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%)
 Frame = -1

Query: 469 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPRARFDDGGMPIARGPPEPAASQ 293
           G+GFVTFAS+DEA+KA+TEMN K LNGRV+FVD+AKP  +    GMPIARGPPE    Q
Sbjct: 74  GYGFVTFASQDEAEKAITEMNEKALNGRVVFVDYAKPDTK-RSMGMPIARGPPEDLNKQ 131


>ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
           lyrata] gi|297317041|gb|EFH47463.1| hypothetical protein
           ARALYDRAFT_487428 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -1

Query: 469 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPRARFDDGGMPIARGPPEP 305
           GFGFVTFAS DEA KA+ E NG+Q NGRVIFVD+AK +  F  G  PIARGPP+P
Sbjct: 76  GFGFVTFASVDEAQKALMEFNGQQFNGRVIFVDYAKAKQSFGGGRYPIARGPPDP 130


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/56 (71%), Positives = 46/56 (82%)
 Frame = -1

Query: 469 GFGFVTFASEDEADKAVTEMNGKQLNGRVIFVDHAKPRARFDDGGMPIARGPPEPA 302
           GFGFVTFASEDEA  A++EMNGK LNGRVI+VD+AKPR       +PIARGPPEP+
Sbjct: 73  GFGFVTFASEDEAHNALSEMNGKTLNGRVIYVDYAKPRTD-SRNEVPIARGPPEPS 127


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