BLASTX nr result

ID: Angelica23_contig00010436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010436
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   657   0.0  
gb|ABK95931.1| unknown [Populus trichocarpa]                          639   0.0  
ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding prot...   630   e-178
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   629   e-178
ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding prot...   627   e-177

>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
            [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
            protein product [Vitis vinifera]
          Length = 449

 Score =  657 bits (1694), Expect = 0.0
 Identities = 327/376 (86%), Positives = 340/376 (90%), Gaps = 5/376 (1%)
 Frame = +1

Query: 100  MSNSNQPQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 279
            MS S QPQFRYTQTPSKVLHLRNLPWEC EEELVELCKPFGKIVNTKCNVGANRNQAFVE
Sbjct: 1    MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE 60

Query: 280  FVDLNQAIKMVSYYASSSEPASVRGKHVYIQYSNRHEIVNNKGPGDVPGNVLLVTIEGVE 459
            F+DLNQAI MVSYYASSSEPA VRGK VYIQYSNRHEIVNNK PGDVPGNVLLVTIEGVE
Sbjct: 61   FLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE 120

Query: 460  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETALSAREALDGRSIPRYLL 639
            AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETA SAR ALDGRSIPRYLL
Sbjct: 121  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL 180

Query: 640  PEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNATAIEGFVQPVVGPDGKKKEP 819
            PEHVGSC+LRISYSAHTDLNIKFQSHRSRDYTNPYLPVN TAIEG  QP +GPDGKKKEP
Sbjct: 181  PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEP 240

Query: 820  ESNVLLASIENRIYDVTVDVLNTVFSAFGTVQKIAIFEKNATTQALIQYPDVNTAAVAKD 999
            ESNVLLASIEN  Y VTVDVL+TVFSAFGTVQKIAIFEKN   QALIQYPDV TAAVAK+
Sbjct: 241  ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKE 300

Query: 1000 ALEGHCIYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF-----AAGLPAGATVW 1164
            ALEGHCIYDGGYCKLH+SYSRHTDLNVKA SD+SRDYT+P+SG      A G P   TVW
Sbjct: 301  ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVW 360

Query: 1165 QNPHAAPVFIGSEFAS 1212
            QNP AAP++ G + A+
Sbjct: 361  QNPQAAPLYTGHDAAA 376


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  639 bits (1649), Expect = 0.0
 Identities = 316/375 (84%), Positives = 338/375 (90%), Gaps = 4/375 (1%)
 Frame = +1

Query: 100  MSNSNQPQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 279
            MS S QPQFRYTQTPSKVLHLRNLPWEC EEEL+ELCKPFG+IVNTKCNVGANRNQAFVE
Sbjct: 1    MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANRNQAFVE 60

Query: 280  FVDLNQAIKMVSYYASSSEPASVRGKHVYIQYSNRHEIVNNKGPGDVPGNVLLVTIEGVE 459
            FVD NQAI+MVSYYASSS+PA VRGK VYIQYSNRHEIVNNK PGD PGNVLLVTIEGVE
Sbjct: 61   FVDQNQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVE 120

Query: 460  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETALSAREALDGRSIPRYLL 639
            AGDVSIDVIHLVFSAFG++HKIATFEKAAGFQALIQFTD+ETA SAR ALDGRSIPRYLL
Sbjct: 121  AGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLL 180

Query: 640  PEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNATAIEGFVQPVVGPDGKKKEP 819
            PEHVGSC+LRISYSAHTDLNIKFQSHRSRDYTNPYLPVN TAIEG VQP VG DGKKKEP
Sbjct: 181  PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEP 240

Query: 820  ESNVLLASIENRIYDVTVDVLNTVFSAFGTVQKIAIFEKNATTQALIQYPDVNTAAVAKD 999
            ESNVLLASIEN  Y VT+DVL+TVFSAFGTVQKIAIFEKN  TQALIQYPDV TAAVAK+
Sbjct: 241  ESNVLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKE 300

Query: 1000 ALEGHCIYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF----AAGLPAGATVWQ 1167
             LEGHCIYDGGYCKLH+SYSRHTDLNVKA+SDKSRDYT+P++      A GL    T+WQ
Sbjct: 301  TLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQ 360

Query: 1168 NPHAAPVFIGSEFAS 1212
            NP A  ++ G+ +A+
Sbjct: 361  NPQAGSMYTGNNYAT 375


>ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
            isoform 1 [Glycine max]
          Length = 496

 Score =  630 bits (1624), Expect = e-178
 Identities = 315/367 (85%), Positives = 331/367 (90%)
 Frame = +1

Query: 100  MSNSNQPQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 279
            MS S+Q QFRYTQTPSKVLHLRNLPWEC EEEL ELC+PFGKIVNTKCNVGANRNQAFVE
Sbjct: 1    MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANRNQAFVE 60

Query: 280  FVDLNQAIKMVSYYASSSEPASVRGKHVYIQYSNRHEIVNNKGPGDVPGNVLLVTIEGVE 459
            FVDLNQAI MVSYYASSSEPA VRGK VYIQYSNRHEIVNNK PGD+PGNVLLVTIEGVE
Sbjct: 61   FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120

Query: 460  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETALSAREALDGRSIPRYLL 639
            AGDVSIDVIHLVFSAFGFVHKIATFEK AGFQALIQFTDAETA SAR+ALDGRSIPRYLL
Sbjct: 121  AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLL 180

Query: 640  PEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNATAIEGFVQPVVGPDGKKKEP 819
            P HVGSCNLRISYSAH DLNIKFQS+RSRDYTNP LPVN TAIEG VQ  VGPDGK+KEP
Sbjct: 181  PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 240

Query: 820  ESNVLLASIENRIYDVTVDVLNTVFSAFGTVQKIAIFEKNATTQALIQYPDVNTAAVAKD 999
            +SNVLLASIEN  Y VTVDVL+TVFSAFGTVQKIAIFEKN  TQALIQYPD+ TA+ A++
Sbjct: 241  DSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 300

Query: 1000 ALEGHCIYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGFAAGLPAGATVWQNPHA 1179
            ALEGHCIYDGGYCKLH+SYSRHTDLNVKAFSDKSRDYTVP+    A     AT WQNP A
Sbjct: 301  ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAA-QGPATAWQNPQA 359

Query: 1180 APVFIGS 1200
            AP++ GS
Sbjct: 360  APMYPGS 366


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  629 bits (1621), Expect = e-178
 Identities = 316/379 (83%), Positives = 334/379 (88%), Gaps = 8/379 (2%)
 Frame = +1

Query: 100  MSNSNQPQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 279
            MS S QPQFRYTQTPSKVLHLRNLPWEC EEEL+ELC+PFGKIVNTKCNVG NRNQAFVE
Sbjct: 1    MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCEPFGKIVNTKCNVGNNRNQAFVE 60

Query: 280  FVDLNQAIKMVSYYASSSEPASVRGKHVYIQYSNRHEIVNNKGPGDVPGNVLLVTIEGVE 459
            F + NQAI+MVSYYASSSEPA VRGK VYIQYSNRHEIVNNK PGD PGNVLLVTIEGVE
Sbjct: 61   FAEQNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVE 120

Query: 460  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETALSAREALDGRSIP---- 627
            AGDVSIDVIHLVFSAFG+VHKIATFEKAAGFQALIQFTDAETA SAR ALDGR+I     
Sbjct: 121  AGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRNIMFKKF 180

Query: 628  RYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNATAIEGFVQPVVGPDGK 807
            RYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVN TAI+G VQ  VG DGK
Sbjct: 181  RYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGK 240

Query: 808  KKEPESNVLLASIENRIYDVTVDVLNTVFSAFGTVQKIAIFEKNATTQALIQYPDVNTAA 987
            KKEPESNVLLASIEN  Y VTVDVL+TVFS FGTVQKIAIFEKN  TQALIQYPDV TAA
Sbjct: 241  KKEPESNVLLASIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAA 300

Query: 988  VAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF----AAGLPAGA 1155
            VAK+ LEGHCIYDGGYCKLH+SYSRHTDLNVKAFSDKSRDYT+P++ F    A GL    
Sbjct: 301  VAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAP 360

Query: 1156 TVWQNPHAAPVFIGSEFAS 1212
            T WQNP A  +++GS +A+
Sbjct: 361  TTWQNPQAGSMYLGSNYAT 379


>ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
            isoform 1 [Glycine max]
          Length = 496

 Score =  627 bits (1617), Expect = e-177
 Identities = 314/367 (85%), Positives = 328/367 (89%)
 Frame = +1

Query: 100  MSNSNQPQFRYTQTPSKVLHLRNLPWECIEEELVELCKPFGKIVNTKCNVGANRNQAFVE 279
            MS SNQ QFRYTQTPSKVLHLRNLPWEC EEEL ELCKPFGKI+NTKCNVGANRNQAFVE
Sbjct: 1    MSTSNQHQFRYTQTPSKVLHLRNLPWECSEEELRELCKPFGKIINTKCNVGANRNQAFVE 60

Query: 280  FVDLNQAIKMVSYYASSSEPASVRGKHVYIQYSNRHEIVNNKGPGDVPGNVLLVTIEGVE 459
            F DLNQAI MVSYYASSSEPA VRGK VYIQYSNRHEIVNNK PGD+PGNVLLVTIEGVE
Sbjct: 61   FADLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE 120

Query: 460  AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETALSAREALDGRSIPRYLL 639
            AGDVSIDVIHLVFSAFGFVHKIATFEK AGFQALIQFTDAETA SAR+ALDGRSIPRYLL
Sbjct: 121  AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLL 180

Query: 640  PEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNATAIEGFVQPVVGPDGKKKEP 819
            P HVGSCNLRISYSAH DLNIKFQS+RSRDYTNP LPVN TAIEG VQ  VGPDGK+KEP
Sbjct: 181  PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP 240

Query: 820  ESNVLLASIENRIYDVTVDVLNTVFSAFGTVQKIAIFEKNATTQALIQYPDVNTAAVAKD 999
            ESNVLLASIEN  Y VTVDVL+TVFSAFGTVQKIAIFEKN  TQALIQYPD+ TA+ A++
Sbjct: 241  ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE 300

Query: 1000 ALEGHCIYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGFAAGLPAGATVWQNPHA 1179
            ALEGHCIYDGGYCKLH+SYSRHTDLNVKAFSDKSRDYTVP+    A      T WQNP A
Sbjct: 301  ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAA-QGPPTAWQNPQA 359

Query: 1180 APVFIGS 1200
            A ++ GS
Sbjct: 360  ASMYPGS 366


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