BLASTX nr result

ID: Angelica23_contig00010230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010230
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93625.1| unknown [Populus trichocarpa]                           64   3e-08
ref|XP_002298054.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07

>gb|ABK93625.1| unknown [Populus trichocarpa]
          Length = 240

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
 Frame = +1

Query: 109 LYILSFVILLSLVMAGILFITSVINLRVYDPNSVQIINLSSTPFHSIRAICSFTPYKRLC 288
           ++ +S ++LL+L++   + + ++I+    +P+    ++ SS P  SI+ +C  T Y   C
Sbjct: 35  IFSVSSILLLTLIIG--IALATLIHESNSEPDESPYLS-SSNPAESIKTVCDVTLYPSSC 91

Query: 289 LNTLCSSITTNVSSDNATLPLDNVFPPENIIFLSFQLGTNQLIRLTNNISKLNHIPE--- 459
             ++ SS+ T+   D           PE I  LS Q+   +L  L++ +S  N +     
Sbjct: 92  FTSI-SSLNTSTKPD-----------PEVIFKLSLQVSIAELKNLSSLLSSFNDVNSQAA 139

Query: 460 LQECQMLLDTEMIELNNSLASFQHLDSFSQEVGE-----YLDRFKRIETYLQA------- 603
           L++C    D  + +LN+SL++         EVG       L++   I T++ A       
Sbjct: 140 LKDCVSQFDDSLSKLNDSLSAM--------EVGPGEKMLNLEKVNDIRTWISAAMTDQDT 191

Query: 604 CLDKLEESGSPKIDEIRSNVQ 666
           C+D LEE GS  +DEI++ ++
Sbjct: 192 CIDGLEEMGSKFLDEIKAKIE 212


>ref|XP_002298054.1| predicted protein [Populus trichocarpa] gi|222845312|gb|EEE82859.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
 Frame = +1

Query: 109 LYILSFVILLSLVMAGILFITSVINLRVYDPNSVQIINLSSTPFHSIRAICSFTPYKRLC 288
           ++ +S ++LL+L++   + + ++I+    +P+    ++ SS P  SI+ +C  T Y   C
Sbjct: 35  IFSVSSILLLTLIIG--IALATLIHESNSEPDESPYLS-SSNPAESIKTVCDVTLYPSSC 91

Query: 289 LNTLCSSITTNVSSDNATLPLDNVFPPENIIFLSFQLGTNQLIRLTNNISKLNHIPE--- 459
                    T++SS N +   D    PE I  LS Q+   +L  L++ +S  N +     
Sbjct: 92  F--------TSISSLNISTKPD----PEVIFKLSLQVSIAELKNLSSLLSSFNDVNSQAA 139

Query: 460 LQECQMLLDTEMIELNNSLASFQHLDSFSQEVGE-----YLDRFKRIETYLQA------- 603
           L++C    D  + +LN+SL++         EVG       L++   I T++ A       
Sbjct: 140 LKDCVSQFDDSLSKLNDSLSAM--------EVGPGEKMLNLEKVNDIRTWISAAMTDQDT 191

Query: 604 CLDKLEESGSPKIDEIRSNVQ 666
           C+D LEE GS  +DEI++ ++
Sbjct: 192 CIDGLEEMGSKFLDEIKAKIE 212


Top