BLASTX nr result

ID: Angelica23_contig00010201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010201
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   268   2e-69
ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|1...   260   4e-67
ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   256   8e-66
ref|NP_001132725.1| uncharacterized protein LOC100194211 [Zea ma...   254   2e-65

>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera]
            gi|147783136|emb|CAN70905.1| hypothetical protein
            VITISV_044176 [Vitis vinifera]
            gi|147795384|emb|CAN74235.1| hypothetical protein
            VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  268 bits (685), Expect = 2e-69
 Identities = 128/147 (87%), Positives = 141/147 (95%)
 Frame = +2

Query: 671  RYLNDVDYFGGFEQEELDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLFNMR 850
            RYLNDVDY+GGFEQE+LDQLFEAM SN+KAWC+GFAPLAVGGDMDSVAVQEFSRTLFNMR
Sbjct: 123  RYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 182

Query: 851  PDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNLGGESIVEVMS 1030
            PDIALSVA+ IF  DLR +LCHVTVPCHI+QS+KDLAVPVVVSEYLH+NLGGESIVEVM+
Sbjct: 183  PDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEVMT 242

Query: 1031 TDGHLPQLSSPDVVIPVLLRHIRNNIV 1111
            +DGHLPQLSSPD+V+PVLLRHIR NIV
Sbjct: 243  SDGHLPQLSSPDIVVPVLLRHIRYNIV 269


>ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|118489325|gb|ABK96467.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222840815|gb|EEE78362.1| predicted protein [Populus
            trichocarpa]
          Length = 270

 Score =  260 bits (665), Expect = 4e-67
 Identities = 126/149 (84%), Positives = 140/149 (93%)
 Frame = +2

Query: 662  AKYRYLNDVDYFGGFEQEELDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLF 841
            A  RYLNDVDY+GGFEQE+LDQLFEAMQ+N+KAWC+GFAPLAVGGDMDSVAVQEFSRTLF
Sbjct: 120  ASPRYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLF 179

Query: 842  NMRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNLGGESIVE 1021
            NMRPDIALSVA+ IF SD+R +L  VTVPCHI+QSMKDLAVPVV +EYLH+NLGGESIVE
Sbjct: 180  NMRPDIALSVAQTIFQSDMRSILHMVTVPCHILQSMKDLAVPVVAAEYLHQNLGGESIVE 239

Query: 1022 VMSTDGHLPQLSSPDVVIPVLLRHIRNNI 1108
            VMS+DGHLPQLSSPD+VIPVLL+HIR NI
Sbjct: 240  VMSSDGHLPQLSSPDIVIPVLLKHIRYNI 268


>ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|222856742|gb|EEE94289.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  258 bits (658), Expect = 3e-66
 Identities = 125/149 (83%), Positives = 140/149 (93%)
 Frame = +2

Query: 662  AKYRYLNDVDYFGGFEQEELDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLF 841
            A  RYLNDVDY+GGFEQE+LDQLFEAMQ+N+KAWC+GFAPLAVGGDMDS+AVQEFSRTLF
Sbjct: 120  ASPRYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSIAVQEFSRTLF 179

Query: 842  NMRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNLGGESIVE 1021
            NMRPDIALSVA+ IF SD+R +L  VTVPCHI+QSMKDLAVPVV SE+LH+NLGGESIVE
Sbjct: 180  NMRPDIALSVAQTIFHSDMRAILHMVTVPCHILQSMKDLAVPVVASEHLHQNLGGESIVE 239

Query: 1022 VMSTDGHLPQLSSPDVVIPVLLRHIRNNI 1108
            VMS+DGHLPQLSSPD+VIPVLL+HIR NI
Sbjct: 240  VMSSDGHLPQLSSPDIVIPVLLKHIRFNI 268


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
            communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
            regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  256 bits (654), Expect = 8e-66
 Identities = 125/149 (83%), Positives = 139/149 (93%)
 Frame = +2

Query: 662  AKYRYLNDVDYFGGFEQEELDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLF 841
            A  RYLNDVDY+GGFEQE+L+QLFEAM++N+KAWC+GFAPLAVGGDMDSVAVQEFSRTLF
Sbjct: 120  ASPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLF 179

Query: 842  NMRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNLGGESIVE 1021
            NMRPDIALSVA+ IF SD+R +L  V+VPCHI+QS KDLAVPVVVSEYLH+NLG ESI E
Sbjct: 180  NMRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAE 239

Query: 1022 VMSTDGHLPQLSSPDVVIPVLLRHIRNNI 1108
            VMSTDGHLPQLSSPDVVIPVLLRHIR+NI
Sbjct: 240  VMSTDGHLPQLSSPDVVIPVLLRHIRHNI 268


>ref|NP_001132725.1| uncharacterized protein LOC100194211 [Zea mays]
            gi|194695224|gb|ACF81696.1| unknown [Zea mays]
            gi|195638958|gb|ACG38947.1| sigma factor sigB regulation
            protein rsbQ [Zea mays] gi|195645464|gb|ACG42200.1| sigma
            factor sigB regulation protein rsbQ [Zea mays]
            gi|414867331|tpg|DAA45888.1| TPA: Sigma factor sigB
            regulation protein rsbQ [Zea mays]
          Length = 271

 Score =  254 bits (650), Expect = 2e-65
 Identities = 122/151 (80%), Positives = 141/151 (93%)
 Frame = +2

Query: 662  AKYRYLNDVDYFGGFEQEELDQLFEAMQSNFKAWCAGFAPLAVGGDMDSVAVQEFSRTLF 841
            A  RYLNDVDY+GGFEQ+ELD+LFEAM+SN+KAWC+GFAPL VGGDM+SVAVQEFSRTLF
Sbjct: 121  ASPRYLNDVDYYGGFEQDELDELFEAMRSNYKAWCSGFAPLCVGGDMESVAVQEFSRTLF 180

Query: 842  NMRPDIALSVAKIIFMSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHRNLGGESIVE 1021
            N+RPDIALSVA+ IF SD+R LL HVTVPCHI+QS KDLAVPVVVSEYLHR+LGG+SIVE
Sbjct: 181  NIRPDIALSVAQTIFQSDVRSLLPHVTVPCHIVQSTKDLAVPVVVSEYLHRHLGGDSIVE 240

Query: 1022 VMSTDGHLPQLSSPDVVIPVLLRHIRNNIVV 1114
            VM ++GHLPQLSSPD+VIPVLLRHI+++I V
Sbjct: 241  VMPSEGHLPQLSSPDIVIPVLLRHIQHDIAV 271


Top