BLASTX nr result

ID: Angelica23_contig00010192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010192
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06
ref|XP_002332960.1| cc-nbs-lrr resistance protein [Populus trich...    55   6e-06

>ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834485|gb|EEE72962.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 963

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3    LELGPFSDXXXXXXXXXXXWPFSSVISFPNLTTLRLLGWEKVKSTAIFDQLQSPTFPALT 182
            L +GPFS+              +S+    +L  + + GW+K+  T++ DQLQ  T  +L 
Sbjct: 845  LTVGPFSEKLKTFPG------LNSIQHLSSLEEVVISGWDKL--TSLPDQLQYIT--SLK 894

Query: 183  GLDIWNFKGVKALPDSIAKLPSLKNLFILYCKILESLP-MFEESHGLERLEISACPIMKE 359
             L I  F G+KALP+ +  L  L+ L I  CK L  LP   ++    ERLE+  CP++KE
Sbjct: 895  SLYIRRFNGMKALPEWLGSLKCLQQLGIWRCKNLSYLPTTMQQLFLAERLEVIDCPLLKE 954


>ref|XP_002332960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834279|gb|EEE72756.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1145

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
 Frame = +3

Query: 90   NLTTLRLLGWEKVKSTAIFDQLQSPTFPALTGLDIWNFKG---VKALPDSIAKLPSLKNL 260
            +L TL + GW+K+KS     QLQ  T  AL GL I NF G    +ALPD +A L SL++L
Sbjct: 1032 SLETLFIYGWDKLKSVP--HQLQHLT--ALEGLWICNFDGDEFEEALPDWLANLSSLQSL 1087

Query: 261  FILYCKILESLP---MFEESHGLERLEISACPIMKE 359
             I  CK L+ LP     +    L++L ++ACP +KE
Sbjct: 1088 AIWNCKNLKYLPSSTTIQCLSKLKKLGMNACPHLKE 1123


Top